RNA–Protein interactions for RNA: ENST00000412056.5

CPNE1-206, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 998 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-206ENST00000412056 METTL25Q8N6Q8 603 aa12.63□□□□□ -0.39
CPNE1-206ENST00000412056 C11orf65Q8NCR3 313 aa12.63□□□□□ -0.39
CPNE1-206ENST00000412056 HIPK4Q8NE63 616 aa12.63□□□□□ -0.39
CPNE1-206ENST00000412056 OR52P1PQ8NH57 321 aa12.63□□□□□ -0.39
CPNE1-206ENST00000412056 OR5W2Q8NH69 310 aa12.63□□□□□ -0.39
CPNE1-206ENST00000412056 GPR119Q8TDV5 335 aa12.63□□□□□ -0.39
CPNE1-206ENST00000412056 CNOT9Q92600 299 aaKnown RBP12.63□□□□□ -0.39
CPNE1-206ENST00000412056 PMM1Q92871 262 aa12.63□□□□□ -0.39
CPNE1-206ENST00000412056 ZNF524Q96C55 264 aa12.63□□□□□ -0.39
CPNE1-206ENST00000412056 CMTM5Q96DZ9 223 aa12.63□□□□□ -0.39
CPNE1-206ENST00000412056 DOCK7Q96N67 2140 aa12.63□□□□□ -0.39
CPNE1-206ENST00000412056 EFCAB1Q9HAE3 211 aa12.63□□□□□ -0.39
CPNE1-206ENST00000412056 DNAJB12Q9NXW2 375 aaKnown RBP12.63□□□□□ -0.39
CPNE1-206ENST00000412056 USP22Q9UPT9 525 aa12.63□□□□□ -0.39
CPNE1-206ENST00000412056 ZNF443Q9Y2A4 671 aaPredicted RBP12.63□□□□□ -0.39
CPNE1-206ENST00000412056 FASNP49327 2511 aaKnown RBP12.63□□□□□ -0.39
CPNE1-206ENST00000412056 OR2M5A3KFT3 312 aa12.62□□□□□ -0.39
CPNE1-206ENST00000412056 FAM47E-STBD1D6RA91 191 aa12.62□□□□□ -0.39
CPNE1-206ENST00000412056 CCL21O00585 134 aa12.62□□□□□ -0.39
CPNE1-206ENST00000412056 NDUFAB1O14561 156 aa12.62□□□□□ -0.39
CPNE1-206ENST00000412056 LRRTM2O43300 516 aa12.62□□□□□ -0.39
CPNE1-206ENST00000412056 ADAM11O75078 769 aa12.62□□□□□ -0.39
CPNE1-206ENST00000412056 ACTL6AO96019 429 aa12.62□□□□□ -0.39
CPNE1-206ENST00000412056 LINGO3P0C6S8 592 aa12.62□□□□□ -0.39
CPNE1-206ENST00000412056 PABPC4LP0CB38 370 aaKnown RBP12.62□□□□□ -0.39
CPNE1-206ENST00000412056 ETS2P15036 469 aa12.62□□□□□ -0.39
CPNE1-206ENST00000412056 CHMP24386 653 aa12.62□□□□□ -0.39
CPNE1-206ENST00000412056 FOXF1Q12946 379 aa12.62□□□□□ -0.39
CPNE1-206ENST00000412056 ART3Q13508 389 aa12.62□□□□□ -0.39
CPNE1-206ENST00000412056 TMEM44Q2T9K0 475 aa12.62□□□□□ -0.39
CPNE1-206ENST00000412056 C8orf82Q6P1X6 216 aaPredicted RBP12.62□□□□□ -0.39
CPNE1-206ENST00000412056 ZNF585AQ6P3V2 769 aa12.62□□□□□ -0.39
CPNE1-206ENST00000412056 HACD2Q6Y1H2 254 aa12.62□□□□□ -0.39
CPNE1-206ENST00000412056 CMIPQ8IY22 773 aa12.62□□□□□ -0.39
CPNE1-206ENST00000412056 RPRMLQ8N4K4 120 aa12.62□□□□□ -0.39
CPNE1-206ENST00000412056 TOR1AIP2Q8NFQ8 470 aa12.62□□□□□ -0.39
CPNE1-206ENST00000412056 POC1BQ8TC44 478 aa12.62□□□□□ -0.39
CPNE1-206ENST00000412056 BCAS4Q8TDM0 211 aa12.62□□□□□ -0.39
CPNE1-206ENST00000412056 RELTQ969Z4 430 aa12.62□□□□□ -0.39
CPNE1-206ENST00000412056 WDYHV1Q96HA8 205 aa12.62□□□□□ -0.39
CPNE1-206ENST00000412056 TIMP4Q99727 224 aa12.62□□□□□ -0.39
CPNE1-206ENST00000412056 SH3GL1Q99961 368 aa12.62□□□□□ -0.39
CPNE1-206ENST00000412056 ECSITQ9BQ95 431 aa12.62□□□□□ -0.39
CPNE1-206ENST00000412056 PIGQQ9BRB3 760 aa12.62□□□□□ -0.39
CPNE1-206ENST00000412056 GPATCH1Q9BRR8 931 aaKnown RBP12.62□□□□□ -0.39
CPNE1-206ENST00000412056 RSPO3Q9BXY4 272 aaPredicted RBP12.62□□□□□ -0.39
CPNE1-206ENST00000412056 RLIMQ9NVW2 624 aa12.62□□□□□ -0.39
CPNE1-206ENST00000412056 CMTM6Q9NX76 183 aa12.62□□□□□ -0.39
CPNE1-206ENST00000412056 GMPR2Q9P2T1 348 aaKnown RBP12.62□□□□□ -0.39
CPNE1-206ENST00000412056 ERRFI1Q9UJM3 462 aaPredicted RBP12.62□□□□□ -0.39
CPNE1-206ENST00000412056 CHST2Q9Y4C5 530 aa12.62□□□□□ -0.39
CPNE1-206ENST00000412056 GPC6Q9Y625 555 aaPredicted RBP12.62□□□□□ -0.39
CPNE1-206ENST00000412056 MED12LQ86YW9 2145 aa12.62□□□□□ -0.39
CPNE1-206ENST00000412056 A0A087WZY1 265 aa12.61□□□□□ -0.39
CPNE1-206ENST00000412056 CLEC18AA5D8T8 446 aa12.61□□□□□ -0.39
CPNE1-206ENST00000412056 CCT8L1PA6NM43 557 aa12.61□□□□□ -0.39
CPNE1-206ENST00000412056 THBS1P07996 1170 aa12.61□□□□□ -0.39
CPNE1-206ENST00000412056 RYKP34925 604 aa12.61□□□□□ -0.39
CPNE1-206ENST00000412056 PCGF2P35227 344 aa12.61□□□□□ -0.39
CPNE1-206ENST00000412056 LHX2P50458 406 aa12.61□□□□□ -0.39
CPNE1-206ENST00000412056 SLC7A2P52569 658 aa12.61□□□□□ -0.39
CPNE1-206ENST00000412056 PCBP3P57721 371 aaKnown RBP12.61□□□□□ -0.39
CPNE1-206ENST00000412056 EEF1A1P68104 462 aaKnown RBP12.61□□□□□ -0.39
CPNE1-206ENST00000412056 SRYQ05066 204 aa12.61□□□□□ -0.39
CPNE1-206ENST00000412056 RBBP4Q09028 425 aa12.61□□□□□ -0.39
CPNE1-206ENST00000412056 CBFBQ13951 182 aa12.61□□□□□ -0.39
CPNE1-206ENST00000412056 LARS2Q15031 903 aaKnown RBP12.61□□□□□ -0.39
CPNE1-206ENST00000412056 QPRTQ15274 297 aa12.61□□□□□ -0.39
CPNE1-206ENST00000412056 VMACQ2NL98 169 aa12.61□□□□□ -0.39
CPNE1-206ENST00000412056 GLYR1Q49A26 553 aaPredicted RBP12.61□□□□□ -0.39
CPNE1-206ENST00000412056 ZNF311Q5JNZ3 666 aa12.61□□□□□ -0.39
CPNE1-206ENST00000412056 RNF220Q5VTB9 566 aa12.61□□□□□ -0.39
CPNE1-206ENST00000412056 AAGABQ6PD74 315 aa12.61□□□□□ -0.39
CPNE1-206ENST00000412056 ENPP6Q6UWR7 440 aa12.61□□□□□ -0.39
CPNE1-206ENST00000412056 CLEC18BQ6UXF7 455 aa12.61□□□□□ -0.39
CPNE1-206ENST00000412056 ARPINQ7Z6K5 226 aa12.61□□□□□ -0.39
CPNE1-206ENST00000412056 SLC15A3Q8IY34 581 aa12.61□□□□□ -0.39
CPNE1-206ENST00000412056 CLIP4Q8N3C7 705 aa12.61□□□□□ -0.39
CPNE1-206ENST00000412056 GTPBP8Q8N3Z3 284 aaPredicted RBP12.61□□□□□ -0.39
CPNE1-206ENST00000412056 FITM2Q8N6M3 262 aa12.61□□□□□ -0.39
CPNE1-206ENST00000412056 CLEC18CQ8NCF0 446 aa12.61□□□□□ -0.39
CPNE1-206ENST00000412056 RNF145Q96MT1 663 aa12.61□□□□□ -0.39
CPNE1-206ENST00000412056 SPATA9Q9BWV2 254 aa12.61□□□□□ -0.39
CPNE1-206ENST00000412056 PRDM14Q9GZV8 571 aa12.61□□□□□ -0.39
CPNE1-206ENST00000412056 TP63Q9H3D4 680 aaPredicted RBP12.61□□□□□ -0.39
CPNE1-206ENST00000412056 CACYBPQ9HB71 228 aaKnown RBP12.61□□□□□ -0.39
CPNE1-206ENST00000412056 EXOSC3Q9NQT5 275 aaKnown RBP12.61□□□□□ -0.39
CPNE1-206ENST00000412056 ALKBH4Q9NXW9 302 aa12.61□□□□□ -0.39
CPNE1-206ENST00000412056 TAGLN3Q9UI15 199 aa12.61□□□□□ -0.39
CPNE1-206ENST00000412056 CAMK2AQ9UQM7 478 aa12.61□□□□□ -0.39
CPNE1-206ENST00000412056 SLC5A6Q9Y289 635 aa12.61□□□□□ -0.39
CPNE1-206ENST00000412056 IFT52Q9Y366 437 aa12.61□□□□□ -0.39
CPNE1-206ENST00000412056 ZNF337Q9Y3M9 751 aa12.61□□□□□ -0.39
CPNE1-206ENST00000412056 PRRC2CQ9Y520 2896 aaKnown RBP12.6□□□□□ -0.39
CPNE1-206ENST00000412056 A0A1B0GUH1 482 aa12.6□□□□□ -0.39
CPNE1-206ENST00000412056 C7orf72A4D263 438 aa12.6□□□□□ -0.39
CPNE1-206ENST00000412056 CDHR4A6H8M9 788 aa12.6□□□□□ -0.39
CPNE1-206ENST00000412056 FIGNL2A6NMB9 653 aa12.6□□□□□ -0.39
CPNE1-206ENST00000412056 FAM220BPB1ANY3 271 aa12.6□□□□□ -0.39
CPNE1-206ENST00000412056 H3BML4 177 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms