RNA–Protein interactions for RNA: ENST00000411527.5

HLA-DQB2-229, Transcript of major histocompatibility complex, class II, DQ beta 2, humanhuman

BASIC

Gene HLA-DQB2, Length 1,059 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2-229ENST00000411527 RNF144AP50876 292 aaPredicted RBP12.63□□□□□ -0.39
HLA-DQB2-229ENST00000411527 C21orf58P58505 322 aa12.63□□□□□ -0.39
HLA-DQB2-229ENST00000411527 NAA20P61599 178 aa12.63□□□□□ -0.39
HLA-DQB2-229ENST00000411527 STK11Q15831 433 aa12.63□□□□□ -0.39
HLA-DQB2-229ENST00000411527 CFAP157Q5JU67 520 aa12.63□□□□□ -0.39
HLA-DQB2-229ENST00000411527 ZCCHC12Q6PEW1 402 aa12.63□□□□□ -0.39
HLA-DQB2-229ENST00000411527 CBLN3Q6UW01 205 aa12.63□□□□□ -0.39
HLA-DQB2-229ENST00000411527 LRIG3Q6UXM1 1119 aa12.63□□□□□ -0.39
HLA-DQB2-229ENST00000411527 ZYG11AQ6WRX3 759 aa12.63□□□□□ -0.39
HLA-DQB2-229ENST00000411527 FRMD7Q6ZUT3 714 aa12.63□□□□□ -0.39
HLA-DQB2-229ENST00000411527 MTERF4Q7Z6M4 381 aaKnown RBP12.63□□□□□ -0.39
HLA-DQB2-229ENST00000411527 TDRPQ86YL5 185 aa12.63□□□□□ -0.39
HLA-DQB2-229ENST00000411527 SLC43A2Q8N370 569 aa12.63□□□□□ -0.39
HLA-DQB2-229ENST00000411527 NOA1Q8NC60 698 aaKnown RBP12.63□□□□□ -0.39
HLA-DQB2-229ENST00000411527 CLHC1Q8NHS4 586 aa12.63□□□□□ -0.39
HLA-DQB2-229ENST00000411527 ZNF764Q96H86 408 aaPredicted RBP12.63□□□□□ -0.39
HLA-DQB2-229ENST00000411527 TSSK3Q96PN8 268 aa12.63□□□□□ -0.39
HLA-DQB2-229ENST00000411527 RHNO1Q9BSD3 238 aa12.63□□□□□ -0.39
HLA-DQB2-229ENST00000411527 BTBD2Q9BX70 525 aa12.63□□□□□ -0.39
HLA-DQB2-229ENST00000411527 L2HGDHQ9H9P8 463 aa12.63□□□□□ -0.39
HLA-DQB2-229ENST00000411527 ACSS1Q9NUB1 689 aaPredicted RBP12.63□□□□□ -0.39
HLA-DQB2-229ENST00000411527 FAIMQ9NVQ4 179 aa12.63□□□□□ -0.39
HLA-DQB2-229ENST00000411527 BAIAP2L1Q9UHR4 511 aa12.63□□□□□ -0.39
HLA-DQB2-229ENST00000411527 EMCNQ9ULC0 261 aa12.63□□□□□ -0.39
HLA-DQB2-229ENST00000411527 CARD8Q9Y2G2 431 aa12.63□□□□□ -0.39
HLA-DQB2-229ENST00000411527 PTGDR2Q9Y5Y4 395 aa12.63□□□□□ -0.39
HLA-DQB2-229ENST00000411527 CUBNO60494 3623 aa12.62□□□□□ -0.39
HLA-DQB2-229ENST00000411527 ALPK2Q86TB3 2170 aa12.62□□□□□ -0.39
HLA-DQB2-229ENST00000411527 SHISA9B4DS77 424 aa12.62□□□□□ -0.39
HLA-DQB2-229ENST00000411527 C9JVG2 144 aa12.62□□□□□ -0.39
HLA-DQB2-229ENST00000411527 SLC28A1O00337 649 aa12.62□□□□□ -0.39
HLA-DQB2-229ENST00000411527 RGS14O43566 566 aa12.62□□□□□ -0.39
HLA-DQB2-229ENST00000411527 SDC1P18827 310 aa12.62□□□□□ -0.39
HLA-DQB2-229ENST00000411527 OR3A2P47893 321 aa12.62□□□□□ -0.39
HLA-DQB2-229ENST00000411527 P2RX1P51575 399 aa12.62□□□□□ -0.39
HLA-DQB2-229ENST00000411527 PPA1Q15181 289 aa12.62□□□□□ -0.39
HLA-DQB2-229ENST00000411527 TOMM34Q15785 309 aaPredicted RBP12.62□□□□□ -0.39
HLA-DQB2-229ENST00000411527 WHAMMP3Q1A5X7 153 aa12.62□□□□□ -0.39
HLA-DQB2-229ENST00000411527 EXOSC6Q5RKV6 272 aaKnown RBP12.62□□□□□ -0.39
HLA-DQB2-229ENST00000411527 CLEC6AQ6EIG7 209 aa12.62□□□□□ -0.39
HLA-DQB2-229ENST00000411527 Q6ZT83 130 aa12.62□□□□□ -0.39
HLA-DQB2-229ENST00000411527 DTX2Q86UW9 622 aa12.62□□□□□ -0.39
HLA-DQB2-229ENST00000411527 OR2W6PQ8NHA6 318 aa12.62□□□□□ -0.39
HLA-DQB2-229ENST00000411527 ZFP90Q8TF47 636 aa12.62□□□□□ -0.39
HLA-DQB2-229ENST00000411527 CDS1Q92903 461 aa12.62□□□□□ -0.39
HLA-DQB2-229ENST00000411527 ZNF775Q96BV0 537 aaPredicted RBP12.62□□□□□ -0.39
HLA-DQB2-229ENST00000411527 MUCL1Q96DR8 90 aa12.62□□□□□ -0.39
HLA-DQB2-229ENST00000411527 CCT7Q99832 543 aa12.62□□□□□ -0.39
HLA-DQB2-229ENST00000411527 GRIP2Q9C0E4 1043 aa12.62□□□□□ -0.39
HLA-DQB2-229ENST00000411527 CXorf36Q9H7Y0 433 aa12.62□□□□□ -0.39
HLA-DQB2-229ENST00000411527 COQ10BQ9H8M1 238 aa12.62□□□□□ -0.39
HLA-DQB2-229ENST00000411527 GIN1Q9NXP7 522 aa12.62□□□□□ -0.39
HLA-DQB2-229ENST00000411527 KLHL9Q9P2J3 617 aa12.62□□□□□ -0.39
HLA-DQB2-229ENST00000411527 TBK1Q9UHD2 729 aa12.62□□□□□ -0.39
HLA-DQB2-229ENST00000411527 PRSS50Q9UI38 385 aa12.62□□□□□ -0.39
HLA-DQB2-229ENST00000411527 ICAM5Q9UMF0 924 aa12.62□□□□□ -0.39
HLA-DQB2-229ENST00000411527 B3GALT5Q9Y2C3 310 aa12.62□□□□□ -0.39
HLA-DQB2-229ENST00000411527 GPC6Q9Y625 555 aaPredicted RBP12.62□□□□□ -0.39
HLA-DQB2-229ENST00000411527 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.62□□□□□ -0.39
HLA-DQB2-229ENST00000411527 YLPM1P49750 1951 aaKnown RBP12.61□□□□□ -0.39
HLA-DQB2-229ENST00000411527 IGHV4-30-2A0A087WSY4 118 aa12.61□□□□□ -0.39
HLA-DQB2-229ENST00000411527 NPIPA5A0A0B4J1W7 369 aa12.61□□□□□ -0.39
HLA-DQB2-229ENST00000411527 A0A1W2PNR3 127 aa12.61□□□□□ -0.39
HLA-DQB2-229ENST00000411527 A0A1W2PPM1 405 aa12.61□□□□□ -0.39
HLA-DQB2-229ENST00000411527 FAM234BA2RU67 622 aa12.61□□□□□ -0.39
HLA-DQB2-229ENST00000411527 NPIPA7E9PJI5 369 aa12.61□□□□□ -0.39
HLA-DQB2-229ENST00000411527 NPIPB8E9PQR5 432 aa12.61□□□□□ -0.39
HLA-DQB2-229ENST00000411527 GTPBP1O00178 669 aaKnown RBP12.61□□□□□ -0.39
HLA-DQB2-229ENST00000411527 PHF1O43189 567 aaPredicted RBP12.61□□□□□ -0.39
HLA-DQB2-229ENST00000411527 HMGN2P05204 90 aaKnown RBP12.61□□□□□ -0.39
HLA-DQB2-229ENST00000411527 NPIPA8P0DM63 369 aa12.61□□□□□ -0.39
HLA-DQB2-229ENST00000411527 PRKCAP17252 672 aa12.61□□□□□ -0.39
HLA-DQB2-229ENST00000411527 ATP6V1C1P21283 382 aa12.61□□□□□ -0.39
HLA-DQB2-229ENST00000411527 SLC7A1P30825 629 aa12.61□□□□□ -0.39
HLA-DQB2-229ENST00000411527 CDH11P55287 796 aa12.61□□□□□ -0.39
HLA-DQB2-229ENST00000411527 PDE7AQ13946 482 aa12.61□□□□□ -0.39
HLA-DQB2-229ENST00000411527 NRF1Q16656 503 aa12.61□□□□□ -0.39
HLA-DQB2-229ENST00000411527 RFTN2Q52LD8 501 aaPredicted RBP12.61□□□□□ -0.39
HLA-DQB2-229ENST00000411527 KLHL26Q53HC5 615 aa12.61□□□□□ -0.39
HLA-DQB2-229ENST00000411527 AGAP6Q5VW22 663 aa12.61□□□□□ -0.39
HLA-DQB2-229ENST00000411527 Q6ZSR9 355 aa12.61□□□□□ -0.39
HLA-DQB2-229ENST00000411527 TRMT10CQ7L0Y3 403 aaKnown RBP12.61□□□□□ -0.39
HLA-DQB2-229ENST00000411527 ZNF527Q8NB42 609 aa12.61□□□□□ -0.39
HLA-DQB2-229ENST00000411527 GPR119Q8TDV5 335 aa12.61□□□□□ -0.39
HLA-DQB2-229ENST00000411527 FAM120BQ96EK7 910 aaKnown RBP12.61□□□□□ -0.39
HLA-DQB2-229ENST00000411527 STACQ99469 402 aa12.61□□□□□ -0.39
HLA-DQB2-229ENST00000411527 PSD2Q9BQI7 771 aa12.61□□□□□ -0.39
HLA-DQB2-229ENST00000411527 HOXD1Q9GZZ0 328 aa12.61□□□□□ -0.39
HLA-DQB2-229ENST00000411527 PIGUQ9H490 435 aa12.61□□□□□ -0.39
HLA-DQB2-229ENST00000411527 BCO1Q9HAY6 547 aa12.61□□□□□ -0.39
HLA-DQB2-229ENST00000411527 DUSP22Q9NRW4 184 aa12.61□□□□□ -0.39
HLA-DQB2-229ENST00000411527 ZCCHC3Q9NUD5 404 aaKnown RBP12.61□□□□□ -0.39
HLA-DQB2-229ENST00000411527 PSMC3IPQ9P2W1 217 aaPredicted RBP12.61□□□□□ -0.39
HLA-DQB2-229ENST00000411527 ING1Q9UK53 422 aaPredicted RBP12.61□□□□□ -0.39
HLA-DQB2-229ENST00000411527 FIS1Q9Y3D6 152 aa12.61□□□□□ -0.39
HLA-DQB2-229ENST00000411527 ACTL7BQ9Y614 415 aa12.61□□□□□ -0.39
HLA-DQB2-229ENST00000411527 H3BNH8 94 aa12.6□□□□□ -0.39
HLA-DQB2-229ENST00000411527 KIF2AO00139 706 aaPredicted RBP12.6□□□□□ -0.39
HLA-DQB2-229ENST00000411527 ABCD4O14678 606 aa12.6□□□□□ -0.39
HLA-DQB2-229ENST00000411527 RIPK2O43353 540 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms