RNA–Protein interactions for RNA: ENST00000409588.1

NIF3L1-205, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 1 (best) BASIC

Gene NIF3L1, Length 1,269 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-205ENST00000409588 MAGEA8P43361 318 aa13.04□□□□□ -0.32
NIF3L1-205ENST00000409588 KCNJ5P48544 419 aa13.04□□□□□ -0.32
NIF3L1-205ENST00000409588 ANXA11P50995 505 aaKnown RBP13.04□□□□□ -0.32
NIF3L1-205ENST00000409588 TPD52P55327 224 aaPredicted RBP13.04□□□□□ -0.32
NIF3L1-205ENST00000409588 CTBP2P56545 445 aa13.04□□□□□ -0.32
NIF3L1-205ENST00000409588 ZNF117Q03924 483 aa13.04□□□□□ -0.32
NIF3L1-205ENST00000409588 BST1Q10588 318 aa13.04□□□□□ -0.32
NIF3L1-205ENST00000409588 CBFBQ13951 182 aa13.04□□□□□ -0.32
NIF3L1-205ENST00000409588 CASP8Q14790 479 aa13.04□□□□□ -0.32
NIF3L1-205ENST00000409588 RNPS1Q15287 305 aaKnown RBP13.04□□□□□ -0.32
NIF3L1-205ENST00000409588 CD226Q15762 336 aa13.04□□□□□ -0.32
NIF3L1-205ENST00000409588 ZNF141Q15928 474 aa13.04□□□□□ -0.32
NIF3L1-205ENST00000409588 SLC25A53Q5H9E4 307 aa13.04□□□□□ -0.32
NIF3L1-205ENST00000409588 HBMQ6B0K9 141 aa13.04□□□□□ -0.32
NIF3L1-205ENST00000409588 BEND4Q6ZU67 534 aa13.04□□□□□ -0.32
NIF3L1-205ENST00000409588 STK32CQ86UX6 486 aa13.04□□□□□ -0.32
NIF3L1-205ENST00000409588 GATSQ8NAP1 163 aa13.04□□□□□ -0.32
NIF3L1-205ENST00000409588 GLB1L3Q8NCI6 653 aaPredicted RBP13.04□□□□□ -0.32
NIF3L1-205ENST00000409588 OR4A15Q8NGL6 344 aa13.04□□□□□ -0.32
NIF3L1-205ENST00000409588 OR5W2Q8NH69 310 aa13.04□□□□□ -0.32
NIF3L1-205ENST00000409588 GPR119Q8TDV5 335 aa13.04□□□□□ -0.32
NIF3L1-205ENST00000409588 OSTF1Q92882 214 aa13.04□□□□□ -0.32
NIF3L1-205ENST00000409588 CPNE4Q96A23 557 aaPredicted RBP13.04□□□□□ -0.32
NIF3L1-205ENST00000409588 SH3YL1Q96HL8 342 aaPredicted RBP13.04□□□□□ -0.32
NIF3L1-205ENST00000409588 RNF145Q96MT1 663 aa13.04□□□□□ -0.32
NIF3L1-205ENST00000409588 ALPK1Q96QP1 1244 aa13.04□□□□□ -0.32
NIF3L1-205ENST00000409588 TACO1Q9BSH4 297 aaKnown RBP13.04□□□□□ -0.32
NIF3L1-205ENST00000409588 NUF2Q9BZD4 464 aa13.04□□□□□ -0.32
NIF3L1-205ENST00000409588 LAT2Q9GZY6 243 aa13.04□□□□□ -0.32
NIF3L1-205ENST00000409588 OR10A4Q9H209 315 aa13.04□□□□□ -0.32
NIF3L1-205ENST00000409588 NKIRAS1Q9NYS0 192 aa13.04□□□□□ -0.32
NIF3L1-205ENST00000409588 MED12LQ86YW9 2145 aa13.04□□□□□ -0.32
NIF3L1-205ENST00000409588 KIAA1549Q9HCM3 1950 aa13.03□□□□□ -0.32
NIF3L1-205ENST00000409588 UQCRHLA0A096LP55 91 aa13.03□□□□□ -0.32
NIF3L1-205ENST00000409588 RNF103-CHMP3A0A140T963 221 aa13.03□□□□□ -0.32
NIF3L1-205ENST00000409588 ZNF195O14628 629 aa13.03□□□□□ -0.32
NIF3L1-205ENST00000409588 GMFGO60234 142 aa13.03□□□□□ -0.32
NIF3L1-205ENST00000409588 DNAJA2O60884 412 aa13.03□□□□□ -0.32
NIF3L1-205ENST00000409588 SS18L1O75177 396 aaPredicted RBP13.03□□□□□ -0.32
NIF3L1-205ENST00000409588 RAF1P04049 648 aa13.03□□□□□ -0.32
NIF3L1-205ENST00000409588 S100A3P33764 101 aa13.03□□□□□ -0.32
NIF3L1-205ENST00000409588 SOAT1P35610 550 aa13.03□□□□□ -0.32
NIF3L1-205ENST00000409588 UGT2B10P36537 528 aa13.03□□□□□ -0.32
NIF3L1-205ENST00000409588 CPOXP36551 454 aa13.03□□□□□ -0.32
NIF3L1-205ENST00000409588 FAM27E3Q08E93 113 aa13.03□□□□□ -0.32
NIF3L1-205ENST00000409588 CTU2Q2VPK5 515 aaKnown RBP13.03□□□□□ -0.32
NIF3L1-205ENST00000409588 HEPHL1Q6MZM0 1159 aa13.03□□□□□ -0.32
NIF3L1-205ENST00000409588 VWA1Q6PCB0 445 aa13.03□□□□□ -0.32
NIF3L1-205ENST00000409588 ZNF474Q6S9Z5 364 aaPredicted RBP13.03□□□□□ -0.32
NIF3L1-205ENST00000409588 EIF3MQ7L2H7 374 aaKnown RBP13.03□□□□□ -0.32
NIF3L1-205ENST00000409588 C16orf62Q7Z3J2 963 aa13.03□□□□□ -0.32
NIF3L1-205ENST00000409588 SLC43A2Q8N370 569 aa13.03□□□□□ -0.32
NIF3L1-205ENST00000409588 TMEM234Q8WY98 164 aa13.03□□□□□ -0.32
NIF3L1-205ENST00000409588 NEURL3Q96EH8 262 aa13.03□□□□□ -0.32
NIF3L1-205ENST00000409588 SLC35G5Q96KT7 338 aa13.03□□□□□ -0.32
NIF3L1-205ENST00000409588 KLHL15Q96M94 604 aa13.03□□□□□ -0.32
NIF3L1-205ENST00000409588 CCDC115Q96NT0 180 aa13.03□□□□□ -0.32
NIF3L1-205ENST00000409588 ZBTB18Q99592 522 aa13.03□□□□□ -0.32
NIF3L1-205ENST00000409588 USB1Q9BQ65 265 aaKnown RBP13.03□□□□□ -0.32
NIF3L1-205ENST00000409588 HDHD5Q9BXW7 423 aa13.03□□□□□ -0.32
NIF3L1-205ENST00000409588 SAP130Q9H0E3 1048 aa13.03□□□□□ -0.32
NIF3L1-205ENST00000409588 PLEKHF2Q9H8W4 249 aa13.03□□□□□ -0.32
NIF3L1-205ENST00000409588 LIPT1Q9Y234 373 aa13.03□□□□□ -0.32
NIF3L1-205ENST00000409588 CARD8Q9Y2G2 431 aa13.03□□□□□ -0.32
NIF3L1-205ENST00000409588 TESMINQ9Y4I5 508 aa13.03□□□□□ -0.32
NIF3L1-205ENST00000409588 KCNE3Q9Y6H6 103 aa13.03□□□□□ -0.32
NIF3L1-205ENST00000409588 MPDZO75970 2070 aa13.03□□□□□ -0.32
NIF3L1-205ENST00000409588 HIVEP1P15822 2718 aa13.03□□□□□ -0.32
NIF3L1-205ENST00000409588 PCNX3Q9H6A9 2034 aa13.02□□□□□ -0.33
NIF3L1-205ENST00000409588 A0A0J9YW62 118 aa13.02□□□□□ -0.33
NIF3L1-205ENST00000409588 TMEM120BA0PK00 339 aa13.02□□□□□ -0.33
NIF3L1-205ENST00000409588 SERINC4A6NH21 518 aa13.02□□□□□ -0.33
NIF3L1-205ENST00000409588 E9PBE3 544 aa13.02□□□□□ -0.33
NIF3L1-205ENST00000409588 SNNO75324 88 aaPredicted RBP13.02□□□□□ -0.33
NIF3L1-205ENST00000409588 AQP8O94778 261 aa13.02□□□□□ -0.33
NIF3L1-205ENST00000409588 HRGP04196 525 aa13.02□□□□□ -0.33
NIF3L1-205ENST00000409588 IL6P05231 212 aa13.02□□□□□ -0.33
NIF3L1-205ENST00000409588 UBL4AP11441 157 aa13.02□□□□□ -0.33
NIF3L1-205ENST00000409588 KEAP1Q14145 624 aa13.02□□□□□ -0.33
NIF3L1-205ENST00000409588 CBLN3Q6UW01 205 aa13.02□□□□□ -0.33
NIF3L1-205ENST00000409588 PLXDC2Q6UX71 529 aa13.02□□□□□ -0.33
NIF3L1-205ENST00000409588 PAMR1Q6UXH9 720 aa13.02□□□□□ -0.33
NIF3L1-205ENST00000409588 CLECL1Q8IZS7 167 aa13.02□□□□□ -0.33
NIF3L1-205ENST00000409588 ZNF610Q8N9Z0 462 aa13.02□□□□□ -0.33
NIF3L1-205ENST00000409588 OR5AK3PQ8NH89 298 aa13.02□□□□□ -0.33
NIF3L1-205ENST00000409588 POC1BQ8TC44 478 aa13.02□□□□□ -0.33
NIF3L1-205ENST00000409588 ST8SIA1Q92185 356 aa13.02□□□□□ -0.33
NIF3L1-205ENST00000409588 OTUB1Q96FW1 271 aaPredicted RBP13.02□□□□□ -0.33
NIF3L1-205ENST00000409588 PPP1R36Q96LQ0 422 aa13.02□□□□□ -0.33
NIF3L1-205ENST00000409588 WFIKKN1Q96NZ8 548 aa13.02□□□□□ -0.33
NIF3L1-205ENST00000409588 MED18Q9BUE0 208 aa13.02□□□□□ -0.33
NIF3L1-205ENST00000409588 ZNF350Q9GZX5 532 aa13.02□□□□□ -0.33
NIF3L1-205ENST00000409588 MANSC1Q9H8J5 431 aa13.02□□□□□ -0.33
NIF3L1-205ENST00000409588 SERINC1Q9NRX5 453 aa13.02□□□□□ -0.33
NIF3L1-205ENST00000409588 CCM2LQ9NUG4 571 aaPredicted RBP13.02□□□□□ -0.33
NIF3L1-205ENST00000409588 PNPOQ9NVS9 261 aa13.02□□□□□ -0.33
NIF3L1-205ENST00000409588 SLC35A3Q9Y2D2 325 aa13.02□□□□□ -0.33
NIF3L1-205ENST00000409588 AKAP9Q99996 3911 aa13.02□□□□□ -0.33
NIF3L1-205ENST00000409588 SHISA8B8ZZ34 492 aa13.01□□□□□ -0.33
NIF3L1-205ENST00000409588 TNFSF11O14788 317 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms