RNA–Protein interactions for RNA: ENST00000409455.5

LIMS2-205, Transcript of LIM zinc finger domain containing 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LIMS2, Length 2,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-205ENST00000409455 PARM1Q6UWI2 310 aa14.38□□□□□ -0.11
LIMS2-205ENST00000409455 OLIG3Q7RTU3 272 aa14.38□□□□□ -0.11
LIMS2-205ENST00000409455 CEACAM19Q7Z692 300 aa14.38□□□□□ -0.11
LIMS2-205ENST00000409455 TRAM1L1Q8N609 369 aa14.38□□□□□ -0.11
LIMS2-205ENST00000409455 OR5W2Q8NH69 310 aa14.38□□□□□ -0.11
LIMS2-205ENST00000409455 FGF14Q92915 247 aa14.38□□□□□ -0.11
LIMS2-205ENST00000409455 TM4SF18Q96CE8 201 aa14.38□□□□□ -0.11
LIMS2-205ENST00000409455 LRIG1Q96JA1 1093 aa14.38□□□□□ -0.11
LIMS2-205ENST00000409455 CXorf58Q96LI9 332 aa14.38□□□□□ -0.11
LIMS2-205ENST00000409455 RIOK2Q9BVS4 552 aaKnown RBP14.38□□□□□ -0.11
LIMS2-205ENST00000409455 SLC22A23A1A5C7 686 aa14.38□□□□□ -0.11
LIMS2-205ENST00000409455 PRR23D1E9PI22 279 aaPredicted RBP14.38□□□□□ -0.11
LIMS2-205ENST00000409455 RTCAO00442 366 aaKnown RBP14.38□□□□□ -0.11
LIMS2-205ENST00000409455 WNT1P04628 370 aa14.38□□□□□ -0.11
LIMS2-205ENST00000409455 PRR23D2P0DMB1 279 aaPredicted RBP14.38□□□□□ -0.11
LIMS2-205ENST00000409455 GJA4P35212 333 aa14.38□□□□□ -0.11
LIMS2-205ENST00000409455 OMPP47874 163 aa14.38□□□□□ -0.11
LIMS2-205ENST00000409455 KLF9Q13886 244 aaPredicted RBP14.38□□□□□ -0.11
LIMS2-205ENST00000409455 SLC25A35Q3KQZ1 300 aa14.38□□□□□ -0.11
LIMS2-205ENST00000409455 RGS7BPQ6MZT1 257 aaPredicted RBP14.38□□□□□ -0.11
LIMS2-205ENST00000409455 ASPGQ86U10 573 aa14.38□□□□□ -0.11
LIMS2-205ENST00000409455 SUN3Q8TAQ9 357 aa14.38□□□□□ -0.11
LIMS2-205ENST00000409455 AHCYL2Q96HN2 611 aaKnown RBP14.38□□□□□ -0.11
LIMS2-205ENST00000409455 TBX5Q99593 518 aa14.38□□□□□ -0.11
LIMS2-205ENST00000409455 MS4A7Q9GZW8 240 aaPredicted RBP14.38□□□□□ -0.11
LIMS2-205ENST00000409455 S1PR5Q9H228 398 aa14.38□□□□□ -0.11
LIMS2-205ENST00000409455 WDR26Q9H7D7 661 aa14.38□□□□□ -0.11
LIMS2-205ENST00000409455 SLC13A4Q9UKG4 626 aa14.38□□□□□ -0.11
LIMS2-205ENST00000409455 A0A0G2JK05 382 aa14.37□□□□□ -0.11
LIMS2-205ENST00000409455 A8MXK9 166 aa14.37□□□□□ -0.11
LIMS2-205ENST00000409455 KPNA3O00505 521 aaPredicted RBP14.37□□□□□ -0.11
LIMS2-205ENST00000409455 NUPL2O15504 423 aaKnown RBP14.37□□□□□ -0.11
LIMS2-205ENST00000409455 LAMP2P13473 410 aa14.37□□□□□ -0.11
LIMS2-205ENST00000409455 CD53P19397 219 aa14.37□□□□□ -0.11
LIMS2-205ENST00000409455 STAT5AP42229 794 aa14.37□□□□□ -0.11
LIMS2-205ENST00000409455 C9orf64Q5T6V5 341 aa14.37□□□□□ -0.11
LIMS2-205ENST00000409455 METTL11BQ5VVY1 283 aa14.37□□□□□ -0.11
LIMS2-205ENST00000409455 BAIAP2L2Q6UXY1 529 aa14.37□□□□□ -0.11
LIMS2-205ENST00000409455 CPOQ8IVL8 374 aa14.37□□□□□ -0.11
LIMS2-205ENST00000409455 GID4Q8IVV7 300 aa14.37□□□□□ -0.11
LIMS2-205ENST00000409455 YAF2Q8IY57 180 aa14.37□□□□□ -0.11
LIMS2-205ENST00000409455 TDHQ8IZJ6 230 aa14.37□□□□□ -0.11
LIMS2-205ENST00000409455 KRT78Q8N1N4 520 aa14.37□□□□□ -0.11
LIMS2-205ENST00000409455 OR2T33Q8NG76 320 aa14.37□□□□□ -0.11
LIMS2-205ENST00000409455 NR4A3Q92570 626 aa14.37□□□□□ -0.11
LIMS2-205ENST00000409455 MARC2Q969Z3 335 aa14.37□□□□□ -0.11
LIMS2-205ENST00000409455 SLC6A15Q9H2J7 730 aa14.37□□□□□ -0.11
LIMS2-205ENST00000409455 IL20Q9NYY1 176 aa14.37□□□□□ -0.11
LIMS2-205ENST00000409455 DOCK8Q8NF50 2099 aa14.37□□□□□ -0.11
LIMS2-205ENST00000409455 TSPAN11A1L157 253 aa14.37□□□□□ -0.11
LIMS2-205ENST00000409455 CPSF4LA6NMK7 179 aaKnown RBP14.37□□□□□ -0.11
LIMS2-205ENST00000409455 J3QRE1 110 aa14.37□□□□□ -0.11
LIMS2-205ENST00000409455 SLC2A10O95528 541 aa14.37□□□□□ -0.11
LIMS2-205ENST00000409455 PROS1P07225 676 aa14.37□□□□□ -0.11
LIMS2-205ENST00000409455 NMBP08949 121 aa14.37□□□□□ -0.11
LIMS2-205ENST00000409455 RAB3BP20337 219 aa14.37□□□□□ -0.11
LIMS2-205ENST00000409455 FPR3P25089 353 aa14.37□□□□□ -0.11
LIMS2-205ENST00000409455 VIPR1P32241 457 aa14.37□□□□□ -0.11
LIMS2-205ENST00000409455 FRKP42685 505 aaPredicted RBP14.37□□□□□ -0.11
LIMS2-205ENST00000409455 KHKP50053 298 aa14.37□□□□□ -0.11
LIMS2-205ENST00000409455 DHODHQ02127 395 aa14.37□□□□□ -0.11
LIMS2-205ENST00000409455 ST3GAL3Q11203 375 aa14.37□□□□□ -0.11
LIMS2-205ENST00000409455 GNA13Q14344 377 aa14.37□□□□□ -0.11
LIMS2-205ENST00000409455 ZNF234Q14588 700 aa14.37□□□□□ -0.11
LIMS2-205ENST00000409455 HNRNPA1L2Q32P51 320 aaKnown RBP14.37□□□□□ -0.11
LIMS2-205ENST00000409455 SEZ6L2Q6UXD5 910 aa14.37□□□□□ -0.11
LIMS2-205ENST00000409455 OR9A1PQ8NGU1 263 aa14.37□□□□□ -0.11
LIMS2-205ENST00000409455 OR51Q1Q8NH59 317 aa14.37□□□□□ -0.11
LIMS2-205ENST00000409455 ZNF416Q9BWM5 594 aa14.37□□□□□ -0.11
LIMS2-205ENST00000409455 PINK1Q9BXM7 581 aa14.37□□□□□ -0.11
LIMS2-205ENST00000409455 GSDMCQ9BYG8 508 aa14.37□□□□□ -0.11
LIMS2-205ENST00000409455 BCL2L10Q9HD36 194 aa14.37□□□□□ -0.11
LIMS2-205ENST00000409455 HINT3Q9NQE9 182 aaKnown RBP14.37□□□□□ -0.11
LIMS2-205ENST00000409455 ZCCHC3Q9NUD5 404 aaKnown RBP14.37□□□□□ -0.11
LIMS2-205ENST00000409455 ENTPD4Q9Y227 616 aa14.37□□□□□ -0.11
LIMS2-205ENST00000409455 PLXND1Q9Y4D7 1925 aa14.36□□□□□ -0.11
LIMS2-205ENST00000409455 DAPL1A0PJW8 107 aa14.36□□□□□ -0.11
LIMS2-205ENST00000409455 FAM183AA6NL82 134 aa14.36□□□□□ -0.11
LIMS2-205ENST00000409455 HMGN1P05114 100 aa14.36□□□□□ -0.11
LIMS2-205ENST00000409455 CHRM4P08173 479 aa14.36□□□□□ -0.11
LIMS2-205ENST00000409455 CXCL2P19875 107 aa14.36□□□□□ -0.11
LIMS2-205ENST00000409455 SLC3A1Q07837 685 aa14.36□□□□□ -0.11
LIMS2-205ENST00000409455 FAM69AQ5T7M9 428 aa14.36□□□□□ -0.11
LIMS2-205ENST00000409455 HENMT1Q5T8I9 393 aaKnown RBP14.36□□□□□ -0.11
LIMS2-205ENST00000409455 PIP5KL1Q5T9C9 394 aa14.36□□□□□ -0.11
LIMS2-205ENST00000409455 KHDRBS2Q5VWX1 349 aaKnown RBP14.36□□□□□ -0.11
LIMS2-205ENST00000409455 LINC00518Q8N0U6 118 aa14.36□□□□□ -0.11
LIMS2-205ENST00000409455 COQ8AQ8NI60 647 aa14.36□□□□□ -0.11
LIMS2-205ENST00000409455 MGAT4CQ9UBM8 478 aa14.36□□□□□ -0.11
LIMS2-205ENST00000409455 IL20RAQ9UHF4 553 aa14.36□□□□□ -0.11
LIMS2-205ENST00000409455 NPFFR2Q9Y5X5 522 aa14.36□□□□□ -0.11
LIMS2-205ENST00000409455 PLSCR5A0PG75 271 aa14.36□□□□□ -0.11
LIMS2-205ENST00000409455 ITGA10O75578 1167 aa14.36□□□□□ -0.11
LIMS2-205ENST00000409455 MT-ND5P03915 603 aa14.36□□□□□ -0.11
LIMS2-205ENST00000409455 SAGP10523 405 aaPredicted RBP14.36□□□□□ -0.11
LIMS2-205ENST00000409455 ALPPL2P10696 532 aa14.36□□□□□ -0.11
LIMS2-205ENST00000409455 NFYAP23511 347 aaPredicted RBP14.36□□□□□ -0.11
LIMS2-205ENST00000409455 GDNFP39905 211 aa14.36□□□□□ -0.11
LIMS2-205ENST00000409455 GPR4P46093 362 aa14.36□□□□□ -0.11
LIMS2-205ENST00000409455 VEGFCP49767 419 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms