RNA–Protein interactions for RNA: ENST00000409403.6

CLK1-202, Transcript of CDC like kinase 1, humanhuman

TSL 5

Gene CLK1, Length 1,664 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-202ENST00000409403 DENND6AQ8IWF6 608 aa5.08□□□□□ -1.6
CLK1-202ENST00000409403 PDZD9Q8IXQ8 264 aa5.08□□□□□ -1.6
CLK1-202ENST00000409403 SPAG16Q8N0X2 631 aa5.08□□□□□ -1.6
CLK1-202ENST00000409403 C12orf45Q8N5I9 185 aaPredicted RBP5.08□□□□□ -1.6
CLK1-202ENST00000409403 ACVR1CQ8NER5 493 aa5.08□□□□□ -1.6
CLK1-202ENST00000409403 OR56A4Q8NGH8 313 aa5.08□□□□□ -1.6
CLK1-202ENST00000409403 TMEM163Q8TC26 289 aa5.08□□□□□ -1.6
CLK1-202ENST00000409403 RNF139Q8WU17 664 aa5.08□□□□□ -1.6
CLK1-202ENST00000409403 ADAMTS14Q8WXS8 1223 aa5.08□□□□□ -1.6
CLK1-202ENST00000409403 KCNJ9Q92806 393 aa5.08□□□□□ -1.6
CLK1-202ENST00000409403 RFKQ969G6 155 aa5.08□□□□□ -1.6
CLK1-202ENST00000409403 PGAP3Q96FM1 320 aaPredicted RBP5.08□□□□□ -1.6
CLK1-202ENST00000409403 SCRN2Q96FV2 425 aa5.08□□□□□ -1.6
CLK1-202ENST00000409403 SCMH1Q96GD3 660 aa5.08□□□□□ -1.6
CLK1-202ENST00000409403 WDYHV1Q96HA8 205 aa5.08□□□□□ -1.6
CLK1-202ENST00000409403 KCTD7Q96MP8 289 aa5.08□□□□□ -1.6
CLK1-202ENST00000409403 ZNF599Q96NL3 588 aa5.08□□□□□ -1.6
CLK1-202ENST00000409403 MAPKAP1Q9BPZ7 522 aa5.08□□□□□ -1.6
CLK1-202ENST00000409403 TBL1YQ9BQ87 522 aa5.08□□□□□ -1.6
CLK1-202ENST00000409403 H2AFJQ9BTM1 129 aa5.08□□□□□ -1.6
CLK1-202ENST00000409403 BARHL1Q9BZE3 327 aa5.08□□□□□ -1.6
CLK1-202ENST00000409403 ABCG4Q9H172 646 aa5.08□□□□□ -1.6
CLK1-202ENST00000409403 OR51J1Q9H342 316 aa5.08□□□□□ -1.6
CLK1-202ENST00000409403 TFB2MQ9H5Q4 396 aaKnown RBP5.08□□□□□ -1.6
CLK1-202ENST00000409403 ELAC1Q9H777 363 aaKnown RBP5.08□□□□□ -1.6
CLK1-202ENST00000409403 MINDY3Q9H8M7 445 aa5.08□□□□□ -1.6
CLK1-202ENST00000409403 UFSP2Q9NUQ7 469 aa5.08□□□□□ -1.6
CLK1-202ENST00000409403 MYEF2Q9P2K5 600 aaKnown RBP5.08□□□□□ -1.6
CLK1-202ENST00000409403 AASSQ9UDR5 926 aa5.08□□□□□ -1.6
CLK1-202ENST00000409403 NDRG2Q9UN36 371 aaKnown RBP5.08□□□□□ -1.6
CLK1-202ENST00000409403 DUSP12Q9UNI6 340 aa5.08□□□□□ -1.6
CLK1-202ENST00000409403 C19orf53Q9UNZ5 99 aaPredicted RBP5.08□□□□□ -1.6
CLK1-202ENST00000409403 ENTPD4Q9Y227 616 aa5.08□□□□□ -1.6
CLK1-202ENST00000409403 CLCA3PQ9Y6N3 262 aa5.08□□□□□ -1.6
CLK1-202ENST00000409403 FNDC1Q4ZHG4 1894 aaPredicted RBP5.07□□□□□ -1.6
CLK1-202ENST00000409403 A0A096LPI6 279 aa5.07□□□□□ -1.6
CLK1-202ENST00000409403 LOC285095A0A1B0GVY8 99 aa5.07□□□□□ -1.6
CLK1-202ENST00000409403 IRGMA1A4Y4 181 aa5.07□□□□□ -1.6
CLK1-202ENST00000409403 FAM90A18PA6NE21 464 aa5.07□□□□□ -1.6
CLK1-202ENST00000409403 FAM90A16PA6NEW6 464 aa5.07□□□□□ -1.6
CLK1-202ENST00000409403 ASB14A6NK59 587 aa5.07□□□□□ -1.6
CLK1-202ENST00000409403 FAM90A9PA6NNJ1 464 aa5.07□□□□□ -1.6
CLK1-202ENST00000409403 FAM90A5PA8MXJ8 464 aa5.07□□□□□ -1.6
CLK1-202ENST00000409403 B9A039 149 aa5.07□□□□□ -1.6
CLK1-202ENST00000409403 D6RAR5 112 aa5.07□□□□□ -1.6
CLK1-202ENST00000409403 C1QTNF3-AMACRE9PGA6 284 aa5.07□□□□□ -1.6
CLK1-202ENST00000409403 SMLR1H3BR10 107 aa5.07□□□□□ -1.6
CLK1-202ENST00000409403 L7N2F9 121 aa5.07□□□□□ -1.6
CLK1-202ENST00000409403 PPP6CO00743 305 aa5.07□□□□□ -1.6
CLK1-202ENST00000409403 ADAMDEC1O15204 470 aa5.07□□□□□ -1.6
CLK1-202ENST00000409403 SLC7A4O43246 635 aa5.07□□□□□ -1.6
CLK1-202ENST00000409403 SLC28A2O43868 658 aa5.07□□□□□ -1.6
CLK1-202ENST00000409403 PRAF2O60831 178 aa5.07□□□□□ -1.6
CLK1-202ENST00000409403 KERAO60938 352 aa5.07□□□□□ -1.6
CLK1-202ENST00000409403 RP2O75695 350 aa5.07□□□□□ -1.6
CLK1-202ENST00000409403 RPP40O75818 363 aaKnown RBP5.07□□□□□ -1.6
CLK1-202ENST00000409403 SC5DO75845 299 aa5.07□□□□□ -1.6
CLK1-202ENST00000409403 MPC2O95563 127 aa5.07□□□□□ -1.6
CLK1-202ENST00000409403 CER1O95813 267 aa5.07□□□□□ -1.6
CLK1-202ENST00000409403 RB1P06400 928 aa5.07□□□□□ -1.6
CLK1-202ENST00000409403 STSP08842 583 aa5.07□□□□□ -1.6
CLK1-202ENST00000409403 FAM90A15PP0C7V4 464 aa5.07□□□□□ -1.6
CLK1-202ENST00000409403 FAM90A14PP0C7W9 464 aa5.07□□□□□ -1.6
CLK1-202ENST00000409403 SFTPCP11686 197 aa5.07□□□□□ -1.6
CLK1-202ENST00000409403 UGT2B7P16662 529 aa5.07□□□□□ -1.6
CLK1-202ENST00000409403 SPI1P17947 270 aa5.07□□□□□ -1.6
CLK1-202ENST00000409403 PVALBP20472 110 aaPredicted RBP5.07□□□□□ -1.6
CLK1-202ENST00000409403 DRD1P21728 446 aa5.07□□□□□ -1.6
CLK1-202ENST00000409403 UBA1P22314 1058 aaKnown RBP5.07□□□□□ -1.6
CLK1-202ENST00000409403 PSMA3P25788 255 aa5.07□□□□□ -1.6
CLK1-202ENST00000409403 C21orf33P30042 268 aaPredicted RBP5.07□□□□□ -1.6
CLK1-202ENST00000409403 SLC6A1P30531 599 aa5.07□□□□□ -1.6
CLK1-202ENST00000409403 GKP32189 559 aa5.07□□□□□ -1.6
CLK1-202ENST00000409403 ACSL1P33121 698 aa5.07□□□□□ -1.6
CLK1-202ENST00000409403 RFC3P40938 356 aa5.07□□□□□ -1.6
CLK1-202ENST00000409403 PLK1P53350 603 aa5.07□□□□□ -1.6
CLK1-202ENST00000409403 BACE1P56817 501 aa5.07□□□□□ -1.6
CLK1-202ENST00000409403 EEF1A1P68104 462 aaKnown RBP5.07□□□□□ -1.6
CLK1-202ENST00000409403 PLIN5Q00G26 463 aa5.07□□□□□ -1.6
CLK1-202ENST00000409403 EEF1A2Q05639 463 aaKnown RBP5.07□□□□□ -1.6
CLK1-202ENST00000409403 OPCMLQ14982 345 aa5.07□□□□□ -1.6
CLK1-202ENST00000409403 CHRNA6Q15825 494 aa5.07□□□□□ -1.6
CLK1-202ENST00000409403 FAM187BQ17R55 369 aa5.07□□□□□ -1.6
CLK1-202ENST00000409403 TTLL9Q3SXZ7 439 aa5.07□□□□□ -1.6
CLK1-202ENST00000409403 CDNFQ49AH0 187 aa5.07□□□□□ -1.6
CLK1-202ENST00000409403 XKR3Q5GH77 459 aa5.07□□□□□ -1.6
CLK1-202ENST00000409403 EEF1A1P5Q5VTE0 462 aa5.07□□□□□ -1.6
CLK1-202ENST00000409403 SLC25A25Q6KCM7 469 aa5.07□□□□□ -1.6
CLK1-202ENST00000409403 MSANTD2Q6P1R3 559 aa5.07□□□□□ -1.6
CLK1-202ENST00000409403 HAGHLQ6PII5 290 aaPredicted RBP5.07□□□□□ -1.6
CLK1-202ENST00000409403 UQCC3Q6UW78 93 aa5.07□□□□□ -1.6
CLK1-202ENST00000409403 MSANTD1Q6ZTZ1 278 aa5.07□□□□□ -1.6
CLK1-202ENST00000409403 CALHM3Q86XJ0 350 aa5.07□□□□□ -1.6
CLK1-202ENST00000409403 SPATA2LQ8IUW3 424 aaPredicted RBP5.07□□□□□ -1.6
CLK1-202ENST00000409403 FAM86B1Q8N7N1 296 aa5.07□□□□□ -1.6
CLK1-202ENST00000409403 IL17RCQ8NAC3 791 aa5.07□□□□□ -1.6
CLK1-202ENST00000409403 ATP6V1C2Q8NEY4 427 aa5.07□□□□□ -1.6
CLK1-202ENST00000409403 OR10A6Q8NH74 314 aa5.07□□□□□ -1.6
CLK1-202ENST00000409403 RNASE11Q8TAA1 199 aaKnown RBP5.07□□□□□ -1.6
CLK1-202ENST00000409403 SFT2D1Q8WV19 159 aa5.07□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms