RNA–Protein interactions for RNA: ENST00000409326.6

PTCD3-202, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 522 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-202ENST00000409326 AIM2O14862 343 aa18.38■□□□□ 0.53
PTCD3-202ENST00000409326 SEMA7AO75326 666 aa18.38■□□□□ 0.53
PTCD3-202ENST00000409326 BCAS1O75363 584 aaPredicted RBP18.38■□□□□ 0.53
PTCD3-202ENST00000409326 THBS1P07996 1170 aa18.38■□□□□ 0.53
PTCD3-202ENST00000409326 ZNF17P17021 662 aa18.38■□□□□ 0.53
PTCD3-202ENST00000409326 SLC6A2P23975 617 aa18.38■□□□□ 0.53
PTCD3-202ENST00000409326 PLAURQ03405 335 aa18.38■□□□□ 0.53
PTCD3-202ENST00000409326 RBBP4Q09028 425 aa18.38■□□□□ 0.53
PTCD3-202ENST00000409326 TMEM44Q2T9K0 475 aa18.38■□□□□ 0.53
PTCD3-202ENST00000409326 LIN52Q52LA3 116 aa18.38■□□□□ 0.53
PTCD3-202ENST00000409326 RABL3Q5HYI8 236 aa18.38■□□□□ 0.53
PTCD3-202ENST00000409326 ENPP6Q6UWR7 440 aa18.38■□□□□ 0.53
PTCD3-202ENST00000409326 PTOV1Q86YD1 416 aa18.38■□□□□ 0.53
PTCD3-202ENST00000409326 EID3Q8N140 333 aa18.38■□□□□ 0.53
PTCD3-202ENST00000409326 FAM26EQ8N5C1 309 aa18.38■□□□□ 0.53
PTCD3-202ENST00000409326 C11orf65Q8NCR3 313 aa18.38■□□□□ 0.53
PTCD3-202ENST00000409326 OR5W2Q8NH69 310 aa18.38■□□□□ 0.53
PTCD3-202ENST00000409326 OR10A6Q8NH74 314 aa18.38■□□□□ 0.53
PTCD3-202ENST00000409326 ZBTB8AQ96BR9 441 aa18.38■□□□□ 0.53
PTCD3-202ENST00000409326 SPATA9Q9BWV2 254 aa18.38■□□□□ 0.53
PTCD3-202ENST00000409326 PRDM14Q9GZV8 571 aa18.38■□□□□ 0.53
PTCD3-202ENST00000409326 EFCAB1Q9HAE3 211 aa18.38■□□□□ 0.53
PTCD3-202ENST00000409326 EXOSC3Q9NQT5 275 aaKnown RBP18.38■□□□□ 0.53
PTCD3-202ENST00000409326 OR2M5A3KFT3 312 aa18.37■□□□□ 0.53
PTCD3-202ENST00000409326 LINC01387J3KSC0 135 aa18.37■□□□□ 0.53
PTCD3-202ENST00000409326 CCL21O00585 134 aa18.37■□□□□ 0.53
PTCD3-202ENST00000409326 DNAJA2O60884 412 aa18.37■□□□□ 0.53
PTCD3-202ENST00000409326 WDR1O75083 606 aa18.37■□□□□ 0.53
PTCD3-202ENST00000409326 CYP7B1O75881 506 aa18.37■□□□□ 0.53
PTCD3-202ENST00000409326 NUDT14O95848 222 aa18.37■□□□□ 0.53
PTCD3-202ENST00000409326 LINGO3P0C6S8 592 aa18.37■□□□□ 0.53
PTCD3-202ENST00000409326 ETS2P15036 469 aa18.37■□□□□ 0.53
PTCD3-202ENST00000409326 GZMMP51124 257 aa18.37■□□□□ 0.53
PTCD3-202ENST00000409326 CCR4P51679 360 aa18.37■□□□□ 0.53
PTCD3-202ENST00000409326 CBFBQ13951 182 aa18.37■□□□□ 0.53
PTCD3-202ENST00000409326 MRPL2Q5T653 305 aaKnown RBP18.37■□□□□ 0.53
PTCD3-202ENST00000409326 FAM91A1Q658Y4 838 aa18.37■□□□□ 0.53
PTCD3-202ENST00000409326 HACD2Q6Y1H2 254 aa18.37■□□□□ 0.53
PTCD3-202ENST00000409326 ARPINQ7Z6K5 226 aa18.37■□□□□ 0.53
PTCD3-202ENST00000409326 VRK2Q86Y07 508 aa18.37■□□□□ 0.53
PTCD3-202ENST00000409326 PM20D2Q8IYS1 436 aa18.37■□□□□ 0.53
PTCD3-202ENST00000409326 GTPBP8Q8N3Z3 284 aaPredicted RBP18.37■□□□□ 0.53
PTCD3-202ENST00000409326 CCDC197Q8NCU1 140 aa18.37■□□□□ 0.53
PTCD3-202ENST00000409326 HIPK4Q8NE63 616 aa18.37■□□□□ 0.53
PTCD3-202ENST00000409326 GPR119Q8TDV5 335 aa18.37■□□□□ 0.53
PTCD3-202ENST00000409326 CACYBPQ9HB71 228 aaKnown RBP18.37■□□□□ 0.53
PTCD3-202ENST00000409326 ANGPT4Q9Y264 503 aa18.37■□□□□ 0.53
PTCD3-202ENST00000409326 ZNF443Q9Y2A4 671 aaPredicted RBP18.37■□□□□ 0.53
PTCD3-202ENST00000409326 MEMO1Q9Y316 297 aa18.37■□□□□ 0.53
PTCD3-202ENST00000409326 IFT52Q9Y366 437 aa18.37■□□□□ 0.53
PTCD3-202ENST00000409326 E9PLN8 166 aa18.36■□□□□ 0.53
PTCD3-202ENST00000409326 AGFG2O95081 481 aa18.36■□□□□ 0.53
PTCD3-202ENST00000409326 PABPC4LP0CB38 370 aaKnown RBP18.36■□□□□ 0.53
PTCD3-202ENST00000409326 GABRA1P14867 456 aa18.36■□□□□ 0.53
PTCD3-202ENST00000409326 LHX2P50458 406 aa18.36■□□□□ 0.53
PTCD3-202ENST00000409326 NUDT2P50583 147 aa18.36■□□□□ 0.53
PTCD3-202ENST00000409326 EEF1A1P68104 462 aaKnown RBP18.36■□□□□ 0.53
PTCD3-202ENST00000409326 LARS2Q15031 903 aaKnown RBP18.36■□□□□ 0.53
PTCD3-202ENST00000409326 RNF220Q5VTB9 566 aa18.36■□□□□ 0.53
PTCD3-202ENST00000409326 ZNF585AQ6P3V2 769 aa18.36■□□□□ 0.53
PTCD3-202ENST00000409326 C3P1Q6ZMU1 363 aa18.36■□□□□ 0.53
PTCD3-202ENST00000409326 ZNF836Q6ZNA1 936 aa18.36■□□□□ 0.53
PTCD3-202ENST00000409326 CALHM3Q86XJ0 350 aa18.36■□□□□ 0.53
PTCD3-202ENST00000409326 ZZZ3Q8IYH5 903 aa18.36■□□□□ 0.53
PTCD3-202ENST00000409326 OR5M1Q8NGP8 315 aa18.36■□□□□ 0.53
PTCD3-202ENST00000409326 WDYHV1Q96HA8 205 aa18.36■□□□□ 0.53
PTCD3-202ENST00000409326 ECSITQ9BQ95 431 aa18.36■□□□□ 0.53
PTCD3-202ENST00000409326 VKORC1Q9BQB6 163 aa18.36■□□□□ 0.53
PTCD3-202ENST00000409326 GPATCH1Q9BRR8 931 aaKnown RBP18.36■□□□□ 0.53
PTCD3-202ENST00000409326 DNAJB12Q9NXW2 375 aaKnown RBP18.36■□□□□ 0.53
PTCD3-202ENST00000409326 GPC6Q9Y625 555 aaPredicted RBP18.36■□□□□ 0.53
PTCD3-202ENST00000409326 CDHR4A6H8M9 788 aa18.35■□□□□ 0.53
PTCD3-202ENST00000409326 SHISA8B8ZZ34 492 aa18.35■□□□□ 0.53
PTCD3-202ENST00000409326 ESRRAP11474 423 aaPredicted RBP18.35■□□□□ 0.53
PTCD3-202ENST00000409326 CPN1P15169 458 aa18.35■□□□□ 0.53
PTCD3-202ENST00000409326 ZNF708P17019 499 aa18.35■□□□□ 0.53
PTCD3-202ENST00000409326 ACVR2AP27037 513 aa18.35■□□□□ 0.53
PTCD3-202ENST00000409326 PCGF2P35227 344 aa18.35■□□□□ 0.53
PTCD3-202ENST00000409326 EIF1P41567 113 aaKnown RBP18.35■□□□□ 0.53
PTCD3-202ENST00000409326 PER3P56645 1201 aa18.35■□□□□ 0.53
PTCD3-202ENST00000409326 PCBP3P57721 371 aaKnown RBP18.35■□□□□ 0.53
PTCD3-202ENST00000409326 ART3Q13508 389 aa18.35■□□□□ 0.53
PTCD3-202ENST00000409326 TOMM34Q15785 309 aaPredicted RBP18.35■□□□□ 0.53
PTCD3-202ENST00000409326 ZSWIM7Q19AV6 140 aa18.35■□□□□ 0.53
PTCD3-202ENST00000409326 C8orf82Q6P1X6 216 aaPredicted RBP18.35■□□□□ 0.53
PTCD3-202ENST00000409326 KRT73Q86Y46 540 aa18.35■□□□□ 0.53
PTCD3-202ENST00000409326 SLC30A8Q8IWU4 369 aa18.35■□□□□ 0.53
PTCD3-202ENST00000409326 ULK2Q8IYT8 1036 aa18.35■□□□□ 0.53
PTCD3-202ENST00000409326 POC1BQ8TC44 478 aa18.35■□□□□ 0.53
PTCD3-202ENST00000409326 CNOT9Q92600 299 aaKnown RBP18.35■□□□□ 0.53
PTCD3-202ENST00000409326 RNF145Q96MT1 663 aa18.35■□□□□ 0.53
PTCD3-202ENST00000409326 DMRTA2Q96SC8 542 aa18.35■□□□□ 0.53
PTCD3-202ENST00000409326 NPAS1Q99742 590 aa18.35■□□□□ 0.53
PTCD3-202ENST00000409326 HOPXQ9BPY8 73 aaPredicted RBP18.35■□□□□ 0.53
PTCD3-202ENST00000409326 ZNF232Q9UNY5 417 aa18.35■□□□□ 0.53
PTCD3-202ENST00000409326 CAMK2AQ9UQM7 478 aa18.35■□□□□ 0.53
PTCD3-202ENST00000409326 ZNF337Q9Y3M9 751 aa18.35■□□□□ 0.53
PTCD3-202ENST00000409326 LRRK2Q5S007 2527 aa18.34■□□□□ 0.53
PTCD3-202ENST00000409326 KIAA1549Q9HCM3 1950 aa18.34■□□□□ 0.53
PTCD3-202ENST00000409326 AHRRA9YTQ3 701 aa18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms