RNA–Protein interactions for RNA: ENST00000408314.1

SNORD88A-201, Transcript of small nucleolar RNA, C/D box 88A, humanhuman

BASIC

Gene SNORD88A, Length 91 nt, Biotype snoRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD88A-201ENST00000408314 TMEM120BA0PK00 339 aa8.15□□□□□ -1.1
SNORD88A-201ENST00000408314 SERINC4A6NH21 518 aa8.15□□□□□ -1.1
SNORD88A-201ENST00000408314 C17orf51A8MQB3 221 aa8.15□□□□□ -1.1
SNORD88A-201ENST00000408314 NPIPB9F8W1W9 429 aa8.15□□□□□ -1.1
SNORD88A-201ENST00000408314 ANKRD28O15084 1053 aa8.15□□□□□ -1.1
SNORD88A-201ENST00000408314 HDAC3O15379 428 aa8.15□□□□□ -1.1
SNORD88A-201ENST00000408314 CXCL13O43927 109 aa8.15□□□□□ -1.1
SNORD88A-201ENST00000408314 UQCRBP14927 111 aa8.15□□□□□ -1.1
SNORD88A-201ENST00000408314 PGCP20142 388 aa8.15□□□□□ -1.1
SNORD88A-201ENST00000408314 IL11P20809 199 aa8.15□□□□□ -1.1
SNORD88A-201ENST00000408314 PSMA4P25789 261 aaKnown RBP8.15□□□□□ -1.1
SNORD88A-201ENST00000408314 FKBP2P26885 142 aaKnown RBP8.15□□□□□ -1.1
SNORD88A-201ENST00000408314 UGT2B10P36537 528 aa8.15□□□□□ -1.1
SNORD88A-201ENST00000408314 CARD18P57730 90 aa8.15□□□□□ -1.1
SNORD88A-201ENST00000408314 BST1Q10588 318 aa8.15□□□□□ -1.1
SNORD88A-201ENST00000408314 FOXF1Q12946 379 aa8.15□□□□□ -1.1
SNORD88A-201ENST00000408314 GNA13Q14344 377 aa8.15□□□□□ -1.1
SNORD88A-201ENST00000408314 GUSBP1Q15486 140 aa8.15□□□□□ -1.1
SNORD88A-201ENST00000408314 CD226Q15762 336 aa8.15□□□□□ -1.1
SNORD88A-201ENST00000408314 ARHGAP11BQ3KRB8 267 aa8.15□□□□□ -1.1
SNORD88A-201ENST00000408314 TMEM201Q5SNT2 666 aa8.15□□□□□ -1.1
SNORD88A-201ENST00000408314 C3orf33Q6P1S2 294 aa8.15□□□□□ -1.1
SNORD88A-201ENST00000408314 SSX8Q7RTT4 187 aa8.15□□□□□ -1.1
SNORD88A-201ENST00000408314 BTLAQ7Z6A9 289 aa8.15□□□□□ -1.1
SNORD88A-201ENST00000408314 ZAR1Q86SH2 424 aa8.15□□□□□ -1.1
SNORD88A-201ENST00000408314 LILRA2Q8N149 483 aa8.15□□□□□ -1.1
SNORD88A-201ENST00000408314 SLC43A2Q8N370 569 aa8.15□□□□□ -1.1
SNORD88A-201ENST00000408314 OR5W2Q8NH69 310 aa8.15□□□□□ -1.1
SNORD88A-201ENST00000408314 PMM1Q92871 262 aa8.15□□□□□ -1.1
SNORD88A-201ENST00000408314 ADGRG7Q96K78 797 aa8.15□□□□□ -1.1
SNORD88A-201ENST00000408314 PPP1R36Q96LQ0 422 aa8.15□□□□□ -1.1
SNORD88A-201ENST00000408314 SDF2Q99470 211 aa8.15□□□□□ -1.1
SNORD88A-201ENST00000408314 SORT1Q99523 831 aa8.15□□□□□ -1.1
SNORD88A-201ENST00000408314 USB1Q9BQ65 265 aaKnown RBP8.15□□□□□ -1.1
SNORD88A-201ENST00000408314 ZNF350Q9GZX5 532 aa8.15□□□□□ -1.1
SNORD88A-201ENST00000408314 OPN3Q9H1Y3 402 aaPredicted RBP8.15□□□□□ -1.1
SNORD88A-201ENST00000408314 CXXC4Q9H2H0 198 aa8.15□□□□□ -1.1
SNORD88A-201ENST00000408314 CACYBPQ9HB71 228 aaKnown RBP8.15□□□□□ -1.1
SNORD88A-201ENST00000408314 PLSCR4Q9NRQ2 329 aa8.15□□□□□ -1.1
SNORD88A-201ENST00000408314 CCM2LQ9NUG4 571 aaPredicted RBP8.15□□□□□ -1.1
SNORD88A-201ENST00000408314 MARCOQ9UEW3 520 aaPredicted RBP8.15□□□□□ -1.1
SNORD88A-201ENST00000408314 BTNL2Q9UIR0 455 aa8.15□□□□□ -1.1
SNORD88A-201ENST00000408314 ICAM5Q9UMF0 924 aa8.15□□□□□ -1.1
SNORD88A-201ENST00000408314 LIPT1Q9Y234 373 aa8.15□□□□□ -1.1
SNORD88A-201ENST00000408314 CARD8Q9Y2G2 431 aa8.15□□□□□ -1.1
SNORD88A-201ENST00000408314 WDR45Q9Y484 360 aa8.15□□□□□ -1.1
SNORD88A-201ENST00000408314 TEP1Q99973 2627 aaKnown RBP8.14□□□□□ -1.11
SNORD88A-201ENST00000408314 SHISA8B8ZZ34 492 aa8.14□□□□□ -1.11
SNORD88A-201ENST00000408314 H0YC42 278 aa8.14□□□□□ -1.11
SNORD88A-201ENST00000408314 TNFSF11O14788 317 aa8.14□□□□□ -1.11
SNORD88A-201ENST00000408314 AQP8O94778 261 aa8.14□□□□□ -1.11
SNORD88A-201ENST00000408314 CPSF4O95639 269 aaKnown RBP8.14□□□□□ -1.11
SNORD88A-201ENST00000408314 CSTAP01040 98 aa8.14□□□□□ -1.11
SNORD88A-201ENST00000408314 HRGP04196 525 aa8.14□□□□□ -1.11
SNORD88A-201ENST00000408314 IDO1P14902 403 aa8.14□□□□□ -1.11
SNORD88A-201ENST00000408314 PRKCAP17252 672 aa8.14□□□□□ -1.11
SNORD88A-201ENST00000408314 FPR1P21462 350 aa8.14□□□□□ -1.11
SNORD88A-201ENST00000408314 CRYGSP22914 178 aa8.14□□□□□ -1.11
SNORD88A-201ENST00000408314 SFTPDP35247 375 aa8.14□□□□□ -1.11
SNORD88A-201ENST00000408314 SLC6A8P48029 635 aa8.14□□□□□ -1.11
SNORD88A-201ENST00000408314 NR1H2P55055 460 aa8.14□□□□□ -1.11
SNORD88A-201ENST00000408314 TPD52P55327 224 aaPredicted RBP8.14□□□□□ -1.11
SNORD88A-201ENST00000408314 CSNK2A1P68400 391 aaPredicted RBP8.14□□□□□ -1.11
SNORD88A-201ENST00000408314 CASP8Q14790 479 aa8.14□□□□□ -1.11
SNORD88A-201ENST00000408314 GPR68Q15743 365 aa8.14□□□□□ -1.11
SNORD88A-201ENST00000408314 ZNF141Q15928 474 aa8.14□□□□□ -1.11
SNORD88A-201ENST00000408314 ZNF239Q16600 458 aaKnown RBP8.14□□□□□ -1.11
SNORD88A-201ENST00000408314 CTU2Q2VPK5 515 aaKnown RBP8.14□□□□□ -1.11
SNORD88A-201ENST00000408314 FAM174BQ3ZCQ3 159 aa8.14□□□□□ -1.11
SNORD88A-201ENST00000408314 SLC25A53Q5H9E4 307 aa8.14□□□□□ -1.11
SNORD88A-201ENST00000408314 PLXDC2Q6UX71 529 aa8.14□□□□□ -1.11
SNORD88A-201ENST00000408314 CMIPQ8IY22 773 aa8.14□□□□□ -1.11
SNORD88A-201ENST00000408314 CLECL1Q8IZS7 167 aa8.14□□□□□ -1.11
SNORD88A-201ENST00000408314 OR5D16Q8NGK9 328 aa8.14□□□□□ -1.11
SNORD88A-201ENST00000408314 RFWD2Q8NHY2 731 aa8.14□□□□□ -1.11
SNORD88A-201ENST00000408314 FBXO27Q8NI29 283 aa8.14□□□□□ -1.11
SNORD88A-201ENST00000408314 RNF128Q8TEB7 428 aa8.14□□□□□ -1.11
SNORD88A-201ENST00000408314 ZFP90Q8TF47 636 aa8.14□□□□□ -1.11
SNORD88A-201ENST00000408314 OSTF1Q92882 214 aa8.14□□□□□ -1.11
SNORD88A-201ENST00000408314 ZHX1-C8orf76Q96EF9 292 aa8.14□□□□□ -1.11
SNORD88A-201ENST00000408314 NEURL3Q96EH8 262 aa8.14□□□□□ -1.11
SNORD88A-201ENST00000408314 CCDC115Q96NT0 180 aa8.14□□□□□ -1.11
SNORD88A-201ENST00000408314 PANX1Q96RD7 426 aa8.14□□□□□ -1.11
SNORD88A-201ENST00000408314 SLC35A5Q9BS91 424 aa8.14□□□□□ -1.11
SNORD88A-201ENST00000408314 HDHD5Q9BXW7 423 aa8.14□□□□□ -1.11
SNORD88A-201ENST00000408314 LAT2Q9GZY6 243 aa8.14□□□□□ -1.11
SNORD88A-201ENST00000408314 OR51I1Q9H343 314 aa8.14□□□□□ -1.11
SNORD88A-201ENST00000408314 TMEM185BQ9H7F4 350 aa8.14□□□□□ -1.11
SNORD88A-201ENST00000408314 NGBQ9NPG2 151 aa8.14□□□□□ -1.11
SNORD88A-201ENST00000408314 ST6GALNAC1Q9NSC7 600 aaPredicted RBP8.14□□□□□ -1.11
SNORD88A-201ENST00000408314 AIG1Q9NVV5 245 aa8.14□□□□□ -1.11
SNORD88A-201ENST00000408314 BEX4Q9NWD9 120 aaPredicted RBP8.14□□□□□ -1.11
SNORD88A-201ENST00000408314 FBXO34Q9NWN3 711 aa8.14□□□□□ -1.11
SNORD88A-201ENST00000408314 KLHL9Q9P2J3 617 aa8.14□□□□□ -1.11
SNORD88A-201ENST00000408314 PRDM4Q9UKN5 801 aa8.14□□□□□ -1.11
SNORD88A-201ENST00000408314 PLEKHA6Q9Y2H5 1048 aa8.14□□□□□ -1.11
SNORD88A-201ENST00000408314 GPR52Q9Y2T5 361 aa8.14□□□□□ -1.11
SNORD88A-201ENST00000408314 ABCA4P78363 2273 aa8.13□□□□□ -1.11
SNORD88A-201ENST00000408314 CSMD2Q7Z408 3487 aa8.13□□□□□ -1.11
SNORD88A-201ENST00000408314 CELSR1Q9NYQ6 3014 aa8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms