RNA–Protein interactions for RNA: ENST00000400555.7

PPP4R1-202, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PPP4R1, Length 3,885 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-202ENST00000400555 CDH10Q9Y6N8 788 aa11.78□□□□□ -0.52
PPP4R1-202ENST00000400555 CARNS1A5YM72 827 aa11.78□□□□□ -0.52
PPP4R1-202ENST00000400555 BLOC1S5-TXNDC5H3BN57 136 aa11.78□□□□□ -0.52
PPP4R1-202ENST00000400555 LANCL1O43813 399 aa11.78□□□□□ -0.52
PPP4R1-202ENST00000400555 OMPP47874 163 aa11.78□□□□□ -0.52
PPP4R1-202ENST00000400555 TPBGQ13641 420 aa11.78□□□□□ -0.52
PPP4R1-202ENST00000400555 RUNX2Q13950 521 aa11.78□□□□□ -0.52
PPP4R1-202ENST00000400555 SUZ12Q15022 739 aaKnown RBP11.78□□□□□ -0.52
PPP4R1-202ENST00000400555 TMEM201Q5SNT2 666 aa11.78□□□□□ -0.52
PPP4R1-202ENST00000400555 KIAA0907Q7Z7F0 614 aaPredicted RBP11.78□□□□□ -0.52
PPP4R1-202ENST00000400555 GRPEL2Q8TAA5 225 aa11.78□□□□□ -0.52
PPP4R1-202ENST00000400555 TRMT10AQ8TBZ6 339 aaKnown RBP11.78□□□□□ -0.52
PPP4R1-202ENST00000400555 OR1E3Q8WZA6 343 aa11.78□□□□□ -0.52
PPP4R1-202ENST00000400555 HERVK_113Q902F9 699 aa11.78□□□□□ -0.52
PPP4R1-202ENST00000400555 CNOT9Q92600 299 aaKnown RBP11.78□□□□□ -0.52
PPP4R1-202ENST00000400555 HRASLS2Q9NWW9 162 aa11.78□□□□□ -0.52
PPP4R1-202ENST00000400555 STMN3Q9NZ72 180 aa11.78□□□□□ -0.52
PPP4R1-202ENST00000400555 HCN3Q9P1Z3 774 aa11.78□□□□□ -0.52
PPP4R1-202ENST00000400555 PKLRP30613 574 aa11.78□□□□□ -0.52
PPP4R1-202ENST00000400555 SSTR2P30874 369 aa11.78□□□□□ -0.52
PPP4R1-202ENST00000400555 ACSL1P33121 698 aa11.78□□□□□ -0.52
PPP4R1-202ENST00000400555 IGFALSP35858 605 aa11.78□□□□□ -0.52
PPP4R1-202ENST00000400555 STAT5AP42229 794 aa11.78□□□□□ -0.52
PPP4R1-202ENST00000400555 NTRK2Q16620 822 aa11.78□□□□□ -0.52
PPP4R1-202ENST00000400555 ZNF776Q68DI1 518 aaPredicted RBP11.78□□□□□ -0.52
PPP4R1-202ENST00000400555 ZNF620Q6ZNG0 422 aa11.78□□□□□ -0.52
PPP4R1-202ENST00000400555 HS6ST2Q96MM7 605 aa11.78□□□□□ -0.52
PPP4R1-202ENST00000400555 ATF6BQ99941 703 aa11.78□□□□□ -0.52
PPP4R1-202ENST00000400555 IL21RQ9HBE5 538 aa11.78□□□□□ -0.52
PPP4R1-202ENST00000400555 P2RX6O15547 441 aa11.77□□□□□ -0.52
PPP4R1-202ENST00000400555 RNF13O43567 381 aa11.77□□□□□ -0.52
PPP4R1-202ENST00000400555 CCR6P51684 374 aa11.77□□□□□ -0.52
PPP4R1-202ENST00000400555 STX4Q12846 297 aa11.77□□□□□ -0.52
PPP4R1-202ENST00000400555 SLC25A35Q3KQZ1 300 aa11.77□□□□□ -0.52
PPP4R1-202ENST00000400555 ZNF658BQ4V348 819 aaPredicted RBP11.77□□□□□ -0.52
PPP4R1-202ENST00000400555 FIGLAQ6QHK4 219 aa11.77□□□□□ -0.52
PPP4R1-202ENST00000400555 FRRS1Q6ZNA5 592 aa11.77□□□□□ -0.52
PPP4R1-202ENST00000400555 LINGO2Q7L985 606 aa11.77□□□□□ -0.52
PPP4R1-202ENST00000400555 GPR135Q8IZ08 494 aa11.77□□□□□ -0.52
PPP4R1-202ENST00000400555 OR8H3Q8N146 312 aa11.77□□□□□ -0.52
PPP4R1-202ENST00000400555 RFT1Q96AA3 541 aa11.77□□□□□ -0.52
PPP4R1-202ENST00000400555 SENP5Q96HI0 755 aaPredicted RBP11.77□□□□□ -0.52
PPP4R1-202ENST00000400555 RBFOX1Q9NWB1 397 aaKnown RBP11.77□□□□□ -0.52
PPP4R1-202ENST00000400555 THAP10Q9P2Z0 257 aaPredicted RBP11.77□□□□□ -0.52
PPP4R1-202ENST00000400555 CBLCQ9ULV8 474 aa11.77□□□□□ -0.52
PPP4R1-202ENST00000400555 A0A0B4J293 547 aa11.77□□□□□ -0.53
PPP4R1-202ENST00000400555 TMEM129A0AVI4 362 aa11.77□□□□□ -0.53
PPP4R1-202ENST00000400555 CTSVO60911 334 aa11.77□□□□□ -0.53
PPP4R1-202ENST00000400555 ZIC2O95409 532 aaPredicted RBP11.77□□□□□ -0.53
PPP4R1-202ENST00000400555 HPGDP15428 266 aa11.77□□□□□ -0.53
PPP4R1-202ENST00000400555 PEBP1P30086 187 aaKnown RBP11.77□□□□□ -0.53
PPP4R1-202ENST00000400555 EVI2BP34910 448 aa11.77□□□□□ -0.53
PPP4R1-202ENST00000400555 ASAH1Q13510 395 aa11.77□□□□□ -0.53
PPP4R1-202ENST00000400555 GLYR1Q49A26 553 aaPredicted RBP11.77□□□□□ -0.53
PPP4R1-202ENST00000400555 Q5BKY6 102 aa11.77□□□□□ -0.53
PPP4R1-202ENST00000400555 HES5Q5TA89 166 aa11.77□□□□□ -0.53
PPP4R1-202ENST00000400555 HCAR2Q8TDS4 363 aa11.77□□□□□ -0.53
PPP4R1-202ENST00000400555 FOXN4Q96NZ1 517 aa11.77□□□□□ -0.53
PPP4R1-202ENST00000400555 SDF2Q99470 211 aa11.77□□□□□ -0.53
PPP4R1-202ENST00000400555 PDCD1LG2Q9BQ51 273 aa11.77□□□□□ -0.53
PPP4R1-202ENST00000400555 C1QTNF7Q9BXJ2 289 aa11.77□□□□□ -0.53
PPP4R1-202ENST00000400555 NCKAP1Q9Y2A7 1128 aa11.77□□□□□ -0.53
PPP4R1-202ENST00000400555 ZBTB32Q9Y2Y4 487 aaPredicted RBP11.77□□□□□ -0.53
PPP4R1-202ENST00000400555 MDC1Q14676 2089 aaKnown RBP11.77□□□□□ -0.53
PPP4R1-202ENST00000400555 TRAPPC13A5PLN9 417 aa11.77□□□□□ -0.53
PPP4R1-202ENST00000400555 SMAD9O15198 467 aaKnown RBP11.77□□□□□ -0.53
PPP4R1-202ENST00000400555 RDH16O75452 317 aa11.77□□□□□ -0.53
PPP4R1-202ENST00000400555 STX11O75558 287 aa11.77□□□□□ -0.53
PPP4R1-202ENST00000400555 RGS9O75916 674 aaPredicted RBP11.77□□□□□ -0.53
PPP4R1-202ENST00000400555 KLF8O95600 359 aaPredicted RBP11.77□□□□□ -0.53
PPP4R1-202ENST00000400555 MT-ND5P03915 603 aa11.77□□□□□ -0.53
PPP4R1-202ENST00000400555 EIF4EP06730 217 aaKnown RBP11.77□□□□□ -0.53
PPP4R1-202ENST00000400555 ARSBP15848 533 aa11.77□□□□□ -0.53
PPP4R1-202ENST00000400555 GIFP27352 417 aa11.77□□□□□ -0.53
PPP4R1-202ENST00000400555 EVX1P49640 407 aa11.77□□□□□ -0.53
PPP4R1-202ENST00000400555 FCN2Q15485 313 aa11.77□□□□□ -0.53
PPP4R1-202ENST00000400555 ACSM3Q53FZ2 586 aa11.77□□□□□ -0.53
PPP4R1-202ENST00000400555 DCST2Q5T1A1 773 aa11.77□□□□□ -0.53
PPP4R1-202ENST00000400555 ARMC6Q6NXE6 501 aa11.77□□□□□ -0.53
PPP4R1-202ENST00000400555 PARM1Q6UWI2 310 aa11.77□□□□□ -0.53
PPP4R1-202ENST00000400555 LYPD4Q6UWN0 246 aa11.77□□□□□ -0.53
PPP4R1-202ENST00000400555 MBOAT2Q6ZWT7 520 aa11.77□□□□□ -0.53
PPP4R1-202ENST00000400555 TOMM5Q8N4H5 51 aa11.77□□□□□ -0.53
PPP4R1-202ENST00000400555 C17orf47Q8NEP4 570 aa11.77□□□□□ -0.53
PPP4R1-202ENST00000400555 OR4N2Q8NGD1 307 aa11.77□□□□□ -0.53
PPP4R1-202ENST00000400555 UPRTQ96BW1 309 aa11.77□□□□□ -0.53
PPP4R1-202ENST00000400555 RBM18Q96H35 190 aaKnown RBP11.77□□□□□ -0.53
PPP4R1-202ENST00000400555 MS4A4EQ96PG1 132 aa11.77□□□□□ -0.53
PPP4R1-202ENST00000400555 FAM83CQ9BQN1 747 aa11.77□□□□□ -0.53
PPP4R1-202ENST00000400555 PPIL3Q9H2H8 161 aaKnown RBP11.77□□□□□ -0.53
PPP4R1-202ENST00000400555 TRDV1A0A1B0GX56 115 aa11.76□□□□□ -0.53
PPP4R1-202ENST00000400555 A0A1W2PQ72 361 aa11.76□□□□□ -0.53
PPP4R1-202ENST00000400555 PRSS38A1L453 326 aa11.76□□□□□ -0.53
PPP4R1-202ENST00000400555 CDHR4A6H8M9 788 aa11.76□□□□□ -0.53
PPP4R1-202ENST00000400555 SLC9B1P1A6NJY1 282 aa11.76□□□□□ -0.53
PPP4R1-202ENST00000400555 DHFRP00374 187 aa11.76□□□□□ -0.53
PPP4R1-202ENST00000400555 MT-ND4P03905 459 aa11.76□□□□□ -0.53
PPP4R1-202ENST00000400555 EDNRAP25101 427 aa11.76□□□□□ -0.53
PPP4R1-202ENST00000400555 ZNF267Q14586 743 aaPredicted RBP11.76□□□□□ -0.53
PPP4R1-202ENST00000400555 TMEM240Q5SV17 173 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms