RNA–Protein interactions for RNA: ENST00000398969.7

COL13A1-203, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,267 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-203ENST00000398969 REM1O75628 298 aa23.72■■□□□ 1.39
COL13A1-203ENST00000398969 EML2O95834 649 aa23.72■■□□□ 1.39
COL13A1-203ENST00000398969 RPS4Y1P22090 263 aaKnown RBP23.72■■□□□ 1.39
COL13A1-203ENST00000398969 CCDC85BQ15834 202 aaPredicted RBP23.72■■□□□ 1.39
COL13A1-203ENST00000398969 DEFB134Q4QY38 66 aa23.72■■□□□ 1.39
COL13A1-203ENST00000398969 TRMT12Q53H54 448 aaKnown RBP23.72■■□□□ 1.39
COL13A1-203ENST00000398969 MRPL2Q5T653 305 aaKnown RBP23.72■■□□□ 1.39
COL13A1-203ENST00000398969 ARL9Q6T311 187 aa23.72■■□□□ 1.39
COL13A1-203ENST00000398969 ZNF619Q8N2I2 560 aa23.72■■□□□ 1.39
COL13A1-203ENST00000398969 SLC37A3Q8NCC5 494 aa23.72■■□□□ 1.39
COL13A1-203ENST00000398969 KCTD12Q96CX2 325 aaKnown RBP23.72■■□□□ 1.39
COL13A1-203ENST00000398969 PIGUQ9H490 435 aa23.72■■□□□ 1.39
COL13A1-203ENST00000398969 TBC1D29Q9UFV1 150 aa23.72■■□□□ 1.39
COL13A1-203ENST00000398969 PAHP00439 452 aa23.71■■□□□ 1.39
COL13A1-203ENST00000398969 SLC35G6P0C7Q6 338 aa23.71■■□□□ 1.39
COL13A1-203ENST00000398969 TFPIP10646 304 aa23.71■■□□□ 1.39
COL13A1-203ENST00000398969 SLC6A1P30531 599 aa23.71■■□□□ 1.39
COL13A1-203ENST00000398969 TALDO1P37837 337 aa23.71■■□□□ 1.39
COL13A1-203ENST00000398969 ATP12AP54707 1039 aa23.71■■□□□ 1.39
COL13A1-203ENST00000398969 RUNX2Q13950 521 aa23.71■■□□□ 1.39
COL13A1-203ENST00000398969 FAM27D1Q5T7N8 215 aa23.71■■□□□ 1.39
COL13A1-203ENST00000398969 DOK4Q8TEW6 326 aa23.71■■□□□ 1.39
COL13A1-203ENST00000398969 PTP4A1Q93096 173 aa23.71■■□□□ 1.39
COL13A1-203ENST00000398969 SERINC2Q96SA4 455 aa23.71■■□□□ 1.39
COL13A1-203ENST00000398969 DBIP07108 87 aaKnown RBP23.71■■□□□ 1.39
COL13A1-203ENST00000398969 RFX3P48380 749 aa23.71■■□□□ 1.39
COL13A1-203ENST00000398969 RAB25P57735 213 aa23.71■■□□□ 1.39
COL13A1-203ENST00000398969 FBXO42Q6P3S6 717 aa23.71■■□□□ 1.39
COL13A1-203ENST00000398969 THSD4Q6ZMP0 1018 aa23.71■■□□□ 1.39
COL13A1-203ENST00000398969 SAMD12Q8N8I0 201 aa23.71■■□□□ 1.39
COL13A1-203ENST00000398969 OR14C36Q8NHC7 312 aa23.71■■□□□ 1.39
COL13A1-203ENST00000398969 AKAP1Q92667 903 aaKnown RBP eCLIP23.71■■□□□ 1.39
COL13A1-203ENST00000398969 RFT1Q96AA3 541 aa23.71■■□□□ 1.39
COL13A1-203ENST00000398969 THAP7Q9BT49 309 aaPredicted RBP23.71■■□□□ 1.39
COL13A1-203ENST00000398969 GTPBP2Q9BX10 602 aaKnown RBP23.71■■□□□ 1.39
COL13A1-203ENST00000398969 CMC2Q9NRP2 79 aa23.71■■□□□ 1.39
COL13A1-203ENST00000398969 INPP5EQ9NRR6 644 aa23.71■■□□□ 1.39
COL13A1-203ENST00000398969 TMEM74BQ9NUR3 256 aa23.71■■□□□ 1.39
COL13A1-203ENST00000398969 KCNE5Q9UJ90 142 aa23.71■■□□□ 1.39
COL13A1-203ENST00000398969 P2RX6O15547 441 aa23.7■■□□□ 1.38
COL13A1-203ENST00000398969 MT-ND5P03915 603 aa23.7■■□□□ 1.38
COL13A1-203ENST00000398969 CPMP14384 443 aa23.7■■□□□ 1.38
COL13A1-203ENST00000398969 RBMS1P29558 406 aaKnown RBP23.7■■□□□ 1.38
COL13A1-203ENST00000398969 MAT2AP31153 395 aaKnown RBP23.7■■□□□ 1.38
COL13A1-203ENST00000398969 FOXK2Q01167 660 aa23.7■■□□□ 1.38
COL13A1-203ENST00000398969 SUZ12Q15022 739 aaKnown RBP23.7■■□□□ 1.38
COL13A1-203ENST00000398969 TCEA2Q15560 299 aa23.7■■□□□ 1.38
COL13A1-203ENST00000398969 DCST2Q5T1A1 773 aa23.7■■□□□ 1.38
COL13A1-203ENST00000398969 ASB18Q6ZVZ8 466 aa23.7■■□□□ 1.38
COL13A1-203ENST00000398969 USP53Q70EK8 1073 aa23.7■■□□□ 1.38
COL13A1-203ENST00000398969 OAFQ86UD1 273 aa23.7■■□□□ 1.38
COL13A1-203ENST00000398969 DTX3Q8N9I9 347 aa23.7■■□□□ 1.38
COL13A1-203ENST00000398969 SCARF2Q96GP6 870 aaPredicted RBP23.7■■□□□ 1.38
COL13A1-203ENST00000398969 NECTIN4Q96NY8 510 aa23.7■■□□□ 1.38
COL13A1-203ENST00000398969 FBXO34Q9NWN3 711 aa23.7■■□□□ 1.38
COL13A1-203ENST00000398969 C19orf53Q9UNZ5 99 aaPredicted RBP23.7■■□□□ 1.38
COL13A1-203ENST00000398969 RASD1Q9Y272 281 aa23.7■■□□□ 1.38
COL13A1-203ENST00000398969 FAM86C2PA6NEL3 165 aa23.7■■□□□ 1.38
COL13A1-203ENST00000398969 SLC22A31A6NKX4 558 aa23.7■■□□□ 1.38
COL13A1-203ENST00000398969 PRR23D1E9PI22 279 aaPredicted RBP23.7■■□□□ 1.38
COL13A1-203ENST00000398969 SMLR1H3BR10 107 aa23.7■■□□□ 1.38
COL13A1-203ENST00000398969 PEX12O00623 359 aa23.7■■□□□ 1.38
COL13A1-203ENST00000398969 ARHGEF9O43307 516 aa23.7■■□□□ 1.38
COL13A1-203ENST00000398969 PLPP2O43688 288 aa23.7■■□□□ 1.38
COL13A1-203ENST00000398969 RCBTB2O95199 551 aa23.7■■□□□ 1.38
COL13A1-203ENST00000398969 PRR23D2P0DMB1 279 aaPredicted RBP23.7■■□□□ 1.38
COL13A1-203ENST00000398969 SMIM10L1P0DMW3 83 aa23.7■■□□□ 1.38
COL13A1-203ENST00000398969 NID1P14543 1247 aa23.7■■□□□ 1.38
COL13A1-203ENST00000398969 CD53P19397 219 aa23.7■■□□□ 1.38
COL13A1-203ENST00000398969 EVI2BP34910 448 aa23.7■■□□□ 1.38
COL13A1-203ENST00000398969 OR10A3P58181 314 aa23.7■■□□□ 1.38
COL13A1-203ENST00000398969 RPS7P62081 194 aaKnown RBP23.7■■□□□ 1.38
COL13A1-203ENST00000398969 SHC2P98077 582 aa23.7■■□□□ 1.38
COL13A1-203ENST00000398969 E2F1Q01094 437 aa23.7■■□□□ 1.38
COL13A1-203ENST00000398969 MAB21L1Q13394 359 aa23.7■■□□□ 1.38
COL13A1-203ENST00000398969 FHL5Q5TD97 284 aa23.7■■□□□ 1.38
COL13A1-203ENST00000398969 GARNL3Q5VVW2 1013 aa23.7■■□□□ 1.38
COL13A1-203ENST00000398969 SFXN4Q6P4A7 337 aa23.7■■□□□ 1.38
COL13A1-203ENST00000398969 OR13C2Q8NGS9 318 aa23.7■■□□□ 1.38
COL13A1-203ENST00000398969 DEDD2Q8WXF8 326 aa23.7■■□□□ 1.38
COL13A1-203ENST00000398969 TM4SF19Q96DZ7 209 aa23.7■■□□□ 1.38
COL13A1-203ENST00000398969 SMIM10Q96HG1 83 aa23.7■■□□□ 1.38
COL13A1-203ENST00000398969 TEAD3Q99594 435 aa23.7■■□□□ 1.38
COL13A1-203ENST00000398969 NDC1Q9BTX1 674 aa23.7■■□□□ 1.38
COL13A1-203ENST00000398969 IFT27Q9BW83 186 aa23.7■■□□□ 1.38
COL13A1-203ENST00000398969 ADAP2Q9NPF8 381 aa23.7■■□□□ 1.38
COL13A1-203ENST00000398969 ZMIZ1Q9ULJ6 1067 aa23.7■■□□□ 1.38
COL13A1-203ENST00000398969 DAPP1Q9UN19 280 aa23.7■■□□□ 1.38
COL13A1-203ENST00000398969 NPIPA5A0A0B4J1W7 369 aa23.69■■□□□ 1.38
COL13A1-203ENST00000398969 NPIPA7E9PJI5 369 aa23.69■■□□□ 1.38
COL13A1-203ENST00000398969 STX11O75558 287 aa23.69■■□□□ 1.38
COL13A1-203ENST00000398969 MRPL3P09001 348 aaKnown RBP23.69■■□□□ 1.38
COL13A1-203ENST00000398969 NPIPA8P0DM63 369 aa23.69■■□□□ 1.38
COL13A1-203ENST00000398969 GNG2P59768 71 aa23.69■■□□□ 1.38
COL13A1-203ENST00000398969 ID2Q02363 134 aa23.69■■□□□ 1.38
COL13A1-203ENST00000398969 BTBD16Q32M84 506 aa23.69■■□□□ 1.38
COL13A1-203ENST00000398969 PLA1AQ53H76 456 aa23.69■■□□□ 1.38
COL13A1-203ENST00000398969 ZNF776Q68DI1 518 aaPredicted RBP23.69■■□□□ 1.38
COL13A1-203ENST00000398969 RPL13AP3Q6NVV1 102 aa23.69■■□□□ 1.38
COL13A1-203ENST00000398969 CADM2Q8N3J6 435 aa23.69■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms