RNA–Protein interactions for RNA: ENST00000398417.6

SMAD4-202, Transcript of SMAD family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMAD4, Length 8,495 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-202ENST00000398417 ZNF454Q8N9F8 522 aa4.61□□□□□ -1.67
SMAD4-202ENST00000398417 LINC01555Q8NAE3 123 aa4.61□□□□□ -1.67
SMAD4-202ENST00000398417 OR52R1Q8NGF1 315 aa4.61□□□□□ -1.67
SMAD4-202ENST00000398417 CCL4L1Q8NHW4 92 aa4.61□□□□□ -1.67
SMAD4-202ENST00000398417 NEIL3Q8TAT5 605 aa4.61□□□□□ -1.67
SMAD4-202ENST00000398417 FGF13Q92913 245 aa4.61□□□□□ -1.67
SMAD4-202ENST00000398417 TNFRSF13CQ96RJ3 184 aa4.61□□□□□ -1.67
SMAD4-202ENST00000398417 LMAN2LQ9H0V9 348 aa4.61□□□□□ -1.67
SMAD4-202ENST00000398417 SLC6A15Q9H2J7 730 aa4.61□□□□□ -1.67
SMAD4-202ENST00000398417 FGF22Q9HCT0 170 aa4.61□□□□□ -1.67
SMAD4-202ENST00000398417 SERGEFQ9UGK8 458 aa4.61□□□□□ -1.67
SMAD4-202ENST00000398417 FAM166BA8MTA8 275 aa4.61□□□□□ -1.67
SMAD4-202ENST00000398417 NOTOA8MTQ0 251 aa4.61□□□□□ -1.67
SMAD4-202ENST00000398417 PRKNO60260 465 aaPredicted RBP4.61□□□□□ -1.67
SMAD4-202ENST00000398417 HIST1H1TP22492 207 aaPredicted RBP4.61□□□□□ -1.67
SMAD4-202ENST00000398417 PYCR1P32322 319 aa4.61□□□□□ -1.67
SMAD4-202ENST00000398417 HMGA2P52926 109 aa4.61□□□□□ -1.67
SMAD4-202ENST00000398417 ODF4Q2M2E3 257 aa4.61□□□□□ -1.67
SMAD4-202ENST00000398417 SLC48A1Q6P1K1 146 aa4.61□□□□□ -1.67
SMAD4-202ENST00000398417 SYT9Q86SS6 491 aa4.61□□□□□ -1.67
SMAD4-202ENST00000398417 NLRP8Q86W28 1048 aa4.61□□□□□ -1.67
SMAD4-202ENST00000398417 LRRC25Q8N386 305 aaPredicted RBP4.61□□□□□ -1.67
SMAD4-202ENST00000398417 DNAJC5GQ8N7S2 189 aa4.61□□□□□ -1.67
SMAD4-202ENST00000398417 ZNF784Q8NCA9 323 aaPredicted RBP4.61□□□□□ -1.67
SMAD4-202ENST00000398417 FBLIM1Q8WUP2 373 aa4.61□□□□□ -1.67
SMAD4-202ENST00000398417 TMEM239Q8WW34 195 aa4.61□□□□□ -1.67
SMAD4-202ENST00000398417 ZMYND19Q96E35 227 aaPredicted RBP4.61□□□□□ -1.67
SMAD4-202ENST00000398417 MTHFD2LQ9H903 347 aaPredicted RBP4.61□□□□□ -1.67
SMAD4-202ENST00000398417 RANGRFQ9HD47 186 aaPredicted RBP4.61□□□□□ -1.67
SMAD4-202ENST00000398417 PAK6Q9NQU5 681 aaPredicted RBP4.61□□□□□ -1.67
SMAD4-202ENST00000398417 ADAM29Q9UKF5 820 aa4.61□□□□□ -1.67
SMAD4-202ENST00000398417 ZBTB32Q9Y2Y4 487 aaPredicted RBP4.61□□□□□ -1.67
SMAD4-202ENST00000398417 A3GALT2U3KPV4 340 aa4.61□□□□□ -1.67
SMAD4-202ENST00000398417 LY75O60449 1722 aa4.6□□□□□ -1.67
SMAD4-202ENST00000398417 RCBTB2O95199 551 aa4.6□□□□□ -1.67
SMAD4-202ENST00000398417 SOD1P00441 154 aa4.6□□□□□ -1.67
SMAD4-202ENST00000398417 IFNGP01579 166 aa4.6□□□□□ -1.67
SMAD4-202ENST00000398417 HLA-DQA2P01906 255 aa4.6□□□□□ -1.67
SMAD4-202ENST00000398417 ABOP16442 354 aa4.6□□□□□ -1.67
SMAD4-202ENST00000398417 RAB4AP20338 218 aa4.6□□□□□ -1.67
SMAD4-202ENST00000398417 IGFALSP35858 605 aa4.6□□□□□ -1.67
SMAD4-202ENST00000398417 SCAND1P57086 179 aa4.6□□□□□ -1.67
SMAD4-202ENST00000398417 RAB14P61106 215 aa4.6□□□□□ -1.67
SMAD4-202ENST00000398417 CDK5Q00535 292 aa4.6□□□□□ -1.67
SMAD4-202ENST00000398417 ERV3-1Q14264 604 aa4.6□□□□□ -1.67
SMAD4-202ENST00000398417 TMEM35AQ53FP2 167 aa4.6□□□□□ -1.67
SMAD4-202ENST00000398417 RPTNQ6XPR3 784 aa4.6□□□□□ -1.67
SMAD4-202ENST00000398417 UBQLNLQ8IYU4 475 aa4.6□□□□□ -1.67
SMAD4-202ENST00000398417 CRIPAKQ8N1N5 446 aa4.6□□□□□ -1.67
SMAD4-202ENST00000398417 Q8N402 240 aa4.6□□□□□ -1.67
SMAD4-202ENST00000398417 OR7G2Q8NG99 324 aa4.6□□□□□ -1.67
SMAD4-202ENST00000398417 OR4Q3Q8NH05 313 aa4.6□□□□□ -1.67
SMAD4-202ENST00000398417 ZNF431Q8TF32 576 aaPredicted RBP4.6□□□□□ -1.67
SMAD4-202ENST00000398417 WDR92Q96MX6 357 aa4.6□□□□□ -1.67
SMAD4-202ENST00000398417 VPS13AQ96RL7 3174 aa4.6□□□□□ -1.67
SMAD4-202ENST00000398417 TREX2Q9BQ50 279 aaPredicted RBP4.6□□□□□ -1.67
SMAD4-202ENST00000398417 TRPM6Q9BX84 2022 aa4.6□□□□□ -1.67
SMAD4-202ENST00000398417 MED28Q9H204 178 aa4.6□□□□□ -1.67
SMAD4-202ENST00000398417 ATP13A2Q9NQ11 1180 aa4.6□□□□□ -1.67
SMAD4-202ENST00000398417 PRDM7Q9NQW5 492 aa4.6□□□□□ -1.67
SMAD4-202ENST00000398417 TBC1D24Q9ULP9 559 aa4.6□□□□□ -1.67
SMAD4-202ENST00000398417 MRPS2Q9Y399 296 aaKnown RBP4.6□□□□□ -1.67
SMAD4-202ENST00000398417 MED31Q9Y3C7 131 aa4.6□□□□□ -1.67
SMAD4-202ENST00000398417 DMDP11532 3685 aa4.6□□□□□ -1.67
SMAD4-202ENST00000398417 A0A0A6YYC8 382 aaPredicted RBP4.6□□□□□ -1.67
SMAD4-202ENST00000398417 I3L1I5 382 aaPredicted RBP4.6□□□□□ -1.67
SMAD4-202ENST00000398417 PEX12O00623 359 aa4.6□□□□□ -1.67
SMAD4-202ENST00000398417 SSNA1O43805 119 aa4.6□□□□□ -1.67
SMAD4-202ENST00000398417 AKAP8O43823 692 aaKnown RBP4.6□□□□□ -1.67
SMAD4-202ENST00000398417 CDC123O75794 336 aaPredicted RBP4.6□□□□□ -1.67
SMAD4-202ENST00000398417 RGS9O75916 674 aaPredicted RBP4.6□□□□□ -1.67
SMAD4-202ENST00000398417 CA3P07451 260 aa4.6□□□□□ -1.67
SMAD4-202ENST00000398417 F3P13726 295 aa4.6□□□□□ -1.67
SMAD4-202ENST00000398417 TRHRP34981 398 aaPredicted RBP4.6□□□□□ -1.67
SMAD4-202ENST00000398417 SRP9P49458 86 aaKnown RBP4.6□□□□□ -1.67
SMAD4-202ENST00000398417 PLK5Q496M5 336 aa4.6□□□□□ -1.67
SMAD4-202ENST00000398417 EIPR1Q53HC9 387 aa4.6□□□□□ -1.67
SMAD4-202ENST00000398417 SYT14P1Q58G82 188 aa4.6□□□□□ -1.67
SMAD4-202ENST00000398417 ADAMTSL4Q6UY14 1074 aa4.6□□□□□ -1.67
SMAD4-202ENST00000398417 FBXL6Q8N531 539 aa4.6□□□□□ -1.67
SMAD4-202ENST00000398417 FRMD1Q8N878 549 aa4.6□□□□□ -1.67
SMAD4-202ENST00000398417 SLC16A11Q8NCK7 471 aa4.6□□□□□ -1.67
SMAD4-202ENST00000398417 OR13C2Q8NGS9 318 aa4.6□□□□□ -1.67
SMAD4-202ENST00000398417 MRAPQ8TCY5 172 aa4.6□□□□□ -1.67
SMAD4-202ENST00000398417 GAL3ST3Q96A11 431 aa4.6□□□□□ -1.67
SMAD4-202ENST00000398417 HHIPL1Q96JK4 782 aa4.6□□□□□ -1.67
SMAD4-202ENST00000398417 SERINC2Q96SA4 455 aa4.6□□□□□ -1.67
SMAD4-202ENST00000398417 ARHGDIGQ99819 225 aa4.6□□□□□ -1.67
SMAD4-202ENST00000398417 GAREM1Q9H706 876 aa4.6□□□□□ -1.67
SMAD4-202ENST00000398417 SAGE1Q9NXZ1 904 aa4.6□□□□□ -1.67
SMAD4-202ENST00000398417 ACSL5Q9ULC5 683 aa4.6□□□□□ -1.67
SMAD4-202ENST00000398417 REV3LO60673 3130 aa4.6□□□□□ -1.67
SMAD4-202ENST00000398417 LOC105369274A0A096LPK9 316 aa4.6□□□□□ -1.67
SMAD4-202ENST00000398417 SGK494L7N484 410 aa4.6□□□□□ -1.67
SMAD4-202ENST00000398417 CSF3P09919 207 aa4.6□□□□□ -1.67
SMAD4-202ENST00000398417 HOXB2P14652 356 aa4.6□□□□□ -1.67
SMAD4-202ENST00000398417 SLC6A6P31641 620 aa4.6□□□□□ -1.67
SMAD4-202ENST00000398417 SNRPGP62308 76 aaKnown RBP4.6□□□□□ -1.67
SMAD4-202ENST00000398417 E2F1Q01094 437 aa4.6□□□□□ -1.67
SMAD4-202ENST00000398417 FABP5Q01469 135 aa4.6□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms