RNA–Protein interactions for RNA: ENST00000397901.7

CHMP1A-201, Transcript of charged multivesicular body protein 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP1A, Length 2,483 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-201ENST00000397901 FBXL2Q9UKC9 423 aa14.88□□□□□ -0.03
CHMP1A-201ENST00000397901 INSL6Q9Y581 213 aa14.88□□□□□ -0.03
CHMP1A-201ENST00000397901 PCDHGA9Q9Y5G4 932 aaKnown RBP14.88□□□□□ -0.03
CHMP1A-201ENST00000397901 A0A1W2PS29 197 aa14.88□□□□□ -0.03
CHMP1A-201ENST00000397901 SLC2A10O95528 541 aa14.88□□□□□ -0.03
CHMP1A-201ENST00000397901 APOC3P02656 99 aa14.88□□□□□ -0.03
CHMP1A-201ENST00000397901 H2AFB2P0C5Z0 115 aa14.88□□□□□ -0.03
CHMP1A-201ENST00000397901 GPR4P46093 362 aa14.88□□□□□ -0.03
CHMP1A-201ENST00000397901 ZP1P60852 638 aa14.88□□□□□ -0.03
CHMP1A-201ENST00000397901 DHODHQ02127 395 aa14.88□□□□□ -0.03
CHMP1A-201ENST00000397901 ZNF793Q6ZN11 406 aa14.88□□□□□ -0.03
CHMP1A-201ENST00000397901 LRRC28Q86X40 367 aaPredicted RBP14.88□□□□□ -0.03
CHMP1A-201ENST00000397901 VRK2Q86Y07 508 aa14.88□□□□□ -0.03
CHMP1A-201ENST00000397901 CDH26Q8IXH8 852 aa14.88□□□□□ -0.03
CHMP1A-201ENST00000397901 OR5M3Q8NGP4 307 aa14.88□□□□□ -0.03
CHMP1A-201ENST00000397901 COQ8AQ8NI60 647 aa14.88□□□□□ -0.03
CHMP1A-201ENST00000397901 SUN3Q8TAQ9 357 aa14.88□□□□□ -0.03
CHMP1A-201ENST00000397901 SLC22A8Q8TCC7 542 aa14.88□□□□□ -0.03
CHMP1A-201ENST00000397901 ZNF514Q96K75 400 aaPredicted RBP14.88□□□□□ -0.03
CHMP1A-201ENST00000397901 SPRTNQ9H040 489 aaPredicted RBP14.88□□□□□ -0.03
CHMP1A-201ENST00000397901 NDRG3Q9UGV2 375 aa14.88□□□□□ -0.03
CHMP1A-201ENST00000397901 CYB5R1Q9UHQ9 305 aa14.88□□□□□ -0.03
CHMP1A-201ENST00000397901 PURGQ9UJV8 347 aaKnown RBP14.88□□□□□ -0.03
CHMP1A-201ENST00000397901 COL4A3Q01955 1670 aa14.88□□□□□ -0.03
CHMP1A-201ENST00000397901 EEF1E1O43324 174 aaKnown RBP14.87□□□□□ -0.03
CHMP1A-201ENST00000397901 RGS11O94810 467 aa14.87□□□□□ -0.03
CHMP1A-201ENST00000397901 FGF19O95750 216 aa14.87□□□□□ -0.03
CHMP1A-201ENST00000397901 CBX7O95931 251 aa14.87□□□□□ -0.03
CHMP1A-201ENST00000397901 RHOP08100 348 aa14.87□□□□□ -0.03
CHMP1A-201ENST00000397901 RFX3P48380 749 aa14.87□□□□□ -0.03
CHMP1A-201ENST00000397901 DUSP2Q05923 314 aa14.87□□□□□ -0.03
CHMP1A-201ENST00000397901 MESP2Q0VG99 397 aa14.87□□□□□ -0.03
CHMP1A-201ENST00000397901 TSPAN31Q12999 210 aa14.87□□□□□ -0.03
CHMP1A-201ENST00000397901 ZNF77Q15935 545 aa14.87□□□□□ -0.03
CHMP1A-201ENST00000397901 ZNF311Q5JNZ3 666 aa14.87□□□□□ -0.03
CHMP1A-201ENST00000397901 TCTE1Q5JU00 501 aa14.87□□□□□ -0.03
CHMP1A-201ENST00000397901 PDSS1Q5T2R2 415 aa14.87□□□□□ -0.03
CHMP1A-201ENST00000397901 FAM46CQ5VWP2 391 aa14.87□□□□□ -0.03
CHMP1A-201ENST00000397901 OR4C11Q6IEV9 310 aa14.87□□□□□ -0.03
CHMP1A-201ENST00000397901 IL20RBQ6UXL0 311 aa14.87□□□□□ -0.03
CHMP1A-201ENST00000397901 ZNF704Q6ZNC4 412 aaPredicted RBP14.87□□□□□ -0.03
CHMP1A-201ENST00000397901 AMZ2Q86W34 360 aa14.87□□□□□ -0.03
CHMP1A-201ENST00000397901 MCATQ8IVS2 390 aaKnown RBP14.87□□□□□ -0.03
CHMP1A-201ENST00000397901 CCDC116Q8IYX3 515 aa14.87□□□□□ -0.03
CHMP1A-201ENST00000397901 KLHL36Q8N4N3 616 aa14.87□□□□□ -0.03
CHMP1A-201ENST00000397901 SCARB1Q8WTV0 552 aa14.87□□□□□ -0.03
CHMP1A-201ENST00000397901 TRMT61BQ9BVS5 477 aaKnown RBP14.87□□□□□ -0.03
CHMP1A-201ENST00000397901 EMC3Q9P0I2 261 aa14.87□□□□□ -0.03
CHMP1A-201ENST00000397901 CXXC1Q9P0U4 656 aaPredicted RBP14.87□□□□□ -0.03
CHMP1A-201ENST00000397901 SLC13A4Q9UKG4 626 aa14.87□□□□□ -0.03
CHMP1A-201ENST00000397901 A0A1B0GVC2 190 aa14.87□□□□□ -0.03
CHMP1A-201ENST00000397901 A6NIN4 97 aa14.87□□□□□ -0.03
CHMP1A-201ENST00000397901 L7N2F9 121 aa14.87□□□□□ -0.03
CHMP1A-201ENST00000397901 DRD2P14416 443 aa14.87□□□□□ -0.03
CHMP1A-201ENST00000397901 RBMS1P29558 406 aaKnown RBP14.87□□□□□ -0.03
CHMP1A-201ENST00000397901 NTSP30990 170 aa14.87□□□□□ -0.03
CHMP1A-201ENST00000397901 PITPNBP48739 271 aa14.87□□□□□ -0.03
CHMP1A-201ENST00000397901 TAS2R38P59533 333 aa14.87□□□□□ -0.03
CHMP1A-201ENST00000397901 ST8SIA6P61647 398 aa14.87□□□□□ -0.03
CHMP1A-201ENST00000397901 IDNKQ5T6J7 187 aa14.87□□□□□ -0.03
CHMP1A-201ENST00000397901 VASNQ6EMK4 673 aa14.87□□□□□ -0.03
CHMP1A-201ENST00000397901 MRGPREQ86SM8 312 aa14.87□□□□□ -0.03
CHMP1A-201ENST00000397901 POGLUT1Q8NBL1 392 aa14.87□□□□□ -0.03
CHMP1A-201ENST00000397901 OR4D10Q8NGI6 311 aa14.87□□□□□ -0.03
CHMP1A-201ENST00000397901 CACNG6Q9BXT2 260 aa14.87□□□□□ -0.03
CHMP1A-201ENST00000397901 AICDAQ9GZX7 198 aa14.87□□□□□ -0.03
CHMP1A-201ENST00000397901 OSGEPL1Q9H4B0 414 aa14.87□□□□□ -0.03
CHMP1A-201ENST00000397901 KLHL31Q9H511 634 aa14.87□□□□□ -0.03
CHMP1A-201ENST00000397901 BCL2L10Q9HD36 194 aa14.87□□□□□ -0.03
CHMP1A-201ENST00000397901 MLXQ9UH92 298 aa14.87□□□□□ -0.03
CHMP1A-201ENST00000397901 KIAA0100Q14667 2235 aaKnown RBP14.87□□□□□ -0.03
CHMP1A-201ENST00000397901 OR6C65A6NJZ3 312 aa14.86□□□□□ -0.03
CHMP1A-201ENST00000397901 FAM183AA6NL82 134 aa14.86□□□□□ -0.03
CHMP1A-201ENST00000397901 SOCS6O14544 535 aa14.86□□□□□ -0.03
CHMP1A-201ENST00000397901 PGRMC2O15173 223 aa14.86□□□□□ -0.03
CHMP1A-201ENST00000397901 H2AFB1P0C5Y9 115 aa14.86□□□□□ -0.03
CHMP1A-201ENST00000397901 GIFP27352 417 aa14.86□□□□□ -0.03
CHMP1A-201ENST00000397901 CALCRP30988 508 aa14.86□□□□□ -0.03
CHMP1A-201ENST00000397901 TRHRP34981 398 aaPredicted RBP14.86□□□□□ -0.03
CHMP1A-201ENST00000397901 IFNGR2P38484 337 aa14.86□□□□□ -0.03
CHMP1A-201ENST00000397901 SELENOPP49908 381 aa14.86□□□□□ -0.03
CHMP1A-201ENST00000397901 NTHL1P78549 312 aa14.86□□□□□ -0.03
CHMP1A-201ENST00000397901 FGL1Q08830 312 aa14.86□□□□□ -0.03
CHMP1A-201ENST00000397901 TSC22D1Q15714 1073 aa14.86□□□□□ -0.03
CHMP1A-201ENST00000397901 TCEAL5Q5H9L2 206 aa14.86□□□□□ -0.03
CHMP1A-201ENST00000397901 LYPD4Q6UWN0 246 aa14.86□□□□□ -0.03
CHMP1A-201ENST00000397901 C12orf40Q86WS4 652 aa14.86□□□□□ -0.03
CHMP1A-201ENST00000397901 NKAIN4Q8IVV8 208 aa14.86□□□□□ -0.03
CHMP1A-201ENST00000397901 DDOQ99489 341 aa14.86□□□□□ -0.03
CHMP1A-201ENST00000397901 PINK1Q9BXM7 581 aa14.86□□□□□ -0.03
CHMP1A-201ENST00000397901 ACTR6Q9GZN1 396 aa14.86□□□□□ -0.03
CHMP1A-201ENST00000397901 DDX31Q9H8H2 851 aaKnown RBP14.86□□□□□ -0.03
CHMP1A-201ENST00000397901 GPR34Q9UPC5 381 aa14.86□□□□□ -0.03
CHMP1A-201ENST00000397901 HEATR5BQ9P2D3 2071 aa14.86□□□□□ -0.03
CHMP1A-201ENST00000397901 A0A0A6YYD5 115 aa14.86□□□□□ -0.03
CHMP1A-201ENST00000397901 FAM74A7A6NL05 159 aa14.86□□□□□ -0.03
CHMP1A-201ENST00000397901 SURF4O15260 269 aa14.86□□□□□ -0.03
CHMP1A-201ENST00000397901 OMPP47874 163 aa14.86□□□□□ -0.03
CHMP1A-201ENST00000397901 SRP9P49458 86 aaKnown RBP14.86□□□□□ -0.03
CHMP1A-201ENST00000397901 KIAA1024LP59773 190 aa14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms