RNA–Protein interactions for RNA: ENST00000397204.8

CAPN3-208, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,237 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-208ENST00000397204 NOS3P29474 1203 aa7.78□□□□□ -1.16
CAPN3-208ENST00000397204 ACVR1BP36896 505 aa7.78□□□□□ -1.16
CAPN3-208ENST00000397204 MANFP55145 182 aaKnown RBP7.78□□□□□ -1.16
CAPN3-208ENST00000397204 CKAP4Q07065 602 aaKnown RBP7.78□□□□□ -1.16
CAPN3-208ENST00000397204 ZNF844Q08AG5 666 aa7.78□□□□□ -1.16
CAPN3-208ENST00000397204 ITGADQ13349 1161 aa7.78□□□□□ -1.16
CAPN3-208ENST00000397204 PLPPR5Q32ZL2 321 aa7.78□□□□□ -1.16
CAPN3-208ENST00000397204 ZNF672Q499Z4 452 aaPredicted RBP7.78□□□□□ -1.16
CAPN3-208ENST00000397204 ZCCHC12Q6PEW1 402 aa7.78□□□□□ -1.16
CAPN3-208ENST00000397204 ZNF551Q7Z340 670 aaPredicted RBP7.78□□□□□ -1.16
CAPN3-208ENST00000397204 SLC43A2Q8N370 569 aa7.78□□□□□ -1.16
CAPN3-208ENST00000397204 B4GALNT2Q8NHY0 566 aa7.78□□□□□ -1.16
CAPN3-208ENST00000397204 POC1BQ8TC44 478 aa7.78□□□□□ -1.16
CAPN3-208ENST00000397204 ACMSDQ8TDX5 336 aa7.78□□□□□ -1.16
CAPN3-208ENST00000397204 WFDC12Q8WWY7 111 aa7.78□□□□□ -1.16
CAPN3-208ENST00000397204 ROBO4Q8WZ75 1007 aa7.78□□□□□ -1.16
CAPN3-208ENST00000397204 SLC9A6Q92581 669 aa7.78□□□□□ -1.16
CAPN3-208ENST00000397204 ANP32BQ92688 251 aaKnown RBP7.78□□□□□ -1.16
CAPN3-208ENST00000397204 CPNE4Q96A23 557 aaPredicted RBP7.78□□□□□ -1.16
CAPN3-208ENST00000397204 CCDC126Q96EE4 140 aa7.78□□□□□ -1.16
CAPN3-208ENST00000397204 ZBED6CLQ96FA7 236 aaPredicted RBP7.78□□□□□ -1.16
CAPN3-208ENST00000397204 KLHL15Q96M94 604 aa7.78□□□□□ -1.16
CAPN3-208ENST00000397204 KCNA7Q96RP8 456 aa7.78□□□□□ -1.16
CAPN3-208ENST00000397204 C12orf49Q9H741 205 aa7.78□□□□□ -1.16
CAPN3-208ENST00000397204 SRA1Q9HD15 236 aaKnown RBP7.78□□□□□ -1.16
CAPN3-208ENST00000397204 RRAGDQ9NQL2 400 aaPredicted RBP7.78□□□□□ -1.16
CAPN3-208ENST00000397204 PLCE1Q9P212 2302 aa7.78□□□□□ -1.16
CAPN3-208ENST00000397204 DPRXA6NFQ7 191 aa7.77□□□□□ -1.17
CAPN3-208ENST00000397204 GJE1A6NN92 205 aa7.77□□□□□ -1.17
CAPN3-208ENST00000397204 A8MV72 311 aaPredicted RBP7.77□□□□□ -1.17
CAPN3-208ENST00000397204 NPIPB8E9PQR5 432 aa7.77□□□□□ -1.17
CAPN3-208ENST00000397204 SCDO00767 359 aa7.77□□□□□ -1.17
CAPN3-208ENST00000397204 UBFD1O14562 309 aaKnown RBP7.77□□□□□ -1.17
CAPN3-208ENST00000397204 EFNA2O43921 213 aa7.77□□□□□ -1.17
CAPN3-208ENST00000397204 TBX19O60806 448 aa7.77□□□□□ -1.17
CAPN3-208ENST00000397204 SEC22BO75396 215 aa7.77□□□□□ -1.17
CAPN3-208ENST00000397204 RSL1D1O76021 490 aaKnown RBP7.77□□□□□ -1.17
CAPN3-208ENST00000397204 KCNK2O95069 426 aa7.77□□□□□ -1.17
CAPN3-208ENST00000397204 ADAP00813 363 aa7.77□□□□□ -1.17
CAPN3-208ENST00000397204 CD8AP01732 235 aa7.77□□□□□ -1.17
CAPN3-208ENST00000397204 IGHV4-39P01824 125 aa7.77□□□□□ -1.17
CAPN3-208ENST00000397204 LINGO3P0C6S8 592 aa7.77□□□□□ -1.17
CAPN3-208ENST00000397204 ELK4P28324 431 aa7.77□□□□□ -1.17
CAPN3-208ENST00000397204 CDKN1AP38936 164 aa7.77□□□□□ -1.17
CAPN3-208ENST00000397204 PRKAG1P54619 331 aa7.77□□□□□ -1.17
CAPN3-208ENST00000397204 DSCR9P59020 149 aa7.77□□□□□ -1.17
CAPN3-208ENST00000397204 KIAA0040Q15053 153 aa7.77□□□□□ -1.17
CAPN3-208ENST00000397204 PGGHGQ32M88 737 aa7.77□□□□□ -1.17
CAPN3-208ENST00000397204 CHRFAM7AQ494W8 412 aa7.77□□□□□ -1.17
CAPN3-208ENST00000397204 AGAP6Q5VW22 663 aa7.77□□□□□ -1.17
CAPN3-208ENST00000397204 TFAP2EQ6VUC0 442 aa7.77□□□□□ -1.17
CAPN3-208ENST00000397204 SYT10Q6XYQ8 523 aa7.77□□□□□ -1.17
CAPN3-208ENST00000397204 NUFIP2Q7Z417 695 aaKnown RBP7.77□□□□□ -1.17
CAPN3-208ENST00000397204 MTERF4Q7Z6M4 381 aaKnown RBP7.77□□□□□ -1.17
CAPN3-208ENST00000397204 DTX2Q86UW9 622 aa7.77□□□□□ -1.17
CAPN3-208ENST00000397204 P2RY8Q86VZ1 359 aa7.77□□□□□ -1.17
CAPN3-208ENST00000397204 TDRPQ86YL5 185 aa7.77□□□□□ -1.17
CAPN3-208ENST00000397204 TUSC5Q8IXB3 177 aa7.77□□□□□ -1.17
CAPN3-208ENST00000397204 PHC2Q8IXK0 858 aa7.77□□□□□ -1.17
CAPN3-208ENST00000397204 CCNYL1Q8N7R7 359 aa7.77□□□□□ -1.17
CAPN3-208ENST00000397204 SLC16A11Q8NCK7 471 aa7.77□□□□□ -1.17
CAPN3-208ENST00000397204 NUP43Q8NFH3 380 aa7.77□□□□□ -1.17
CAPN3-208ENST00000397204 ZFP28Q8NHY6 868 aa7.77□□□□□ -1.17
CAPN3-208ENST00000397204 RNF128Q8TEB7 428 aa7.77□□□□□ -1.17
CAPN3-208ENST00000397204 IFT81Q8WYA0 676 aa7.77□□□□□ -1.17
CAPN3-208ENST00000397204 NEUROG1Q92886 237 aa7.77□□□□□ -1.17
CAPN3-208ENST00000397204 KISS1RQ969F8 398 aaPredicted RBP7.77□□□□□ -1.17
CAPN3-208ENST00000397204 RADILQ96JH8 1075 aa7.77□□□□□ -1.17
CAPN3-208ENST00000397204 EGLN2Q96KS0 407 aa7.77□□□□□ -1.17
CAPN3-208ENST00000397204 HS6ST2Q96MM7 605 aa7.77□□□□□ -1.17
CAPN3-208ENST00000397204 FMO2Q99518 471 aa7.77□□□□□ -1.17
CAPN3-208ENST00000397204 NPAS1Q99742 590 aa7.77□□□□□ -1.17
CAPN3-208ENST00000397204 RHNO1Q9BSD3 238 aa7.77□□□□□ -1.17
CAPN3-208ENST00000397204 TRAF4Q9BUZ4 470 aaPredicted RBP7.77□□□□□ -1.17
CAPN3-208ENST00000397204 TRIM2Q9C040 744 aa7.77□□□□□ -1.17
CAPN3-208ENST00000397204 HOXD1Q9GZZ0 328 aa7.77□□□□□ -1.17
CAPN3-208ENST00000397204 GSTO2Q9H4Y5 243 aa7.77□□□□□ -1.17
CAPN3-208ENST00000397204 MID1IP1Q9NPA3 183 aa7.77□□□□□ -1.17
CAPN3-208ENST00000397204 EQTNQ9NQ60 294 aa7.77□□□□□ -1.17
CAPN3-208ENST00000397204 ACSS1Q9NUB1 689 aaPredicted RBP7.77□□□□□ -1.17
CAPN3-208ENST00000397204 FAIMQ9NVQ4 179 aa7.77□□□□□ -1.17
CAPN3-208ENST00000397204 CISD1Q9NZ45 108 aaKnown RBP7.77□□□□□ -1.17
CAPN3-208ENST00000397204 KLHL13Q9P2N7 655 aa7.77□□□□□ -1.17
CAPN3-208ENST00000397204 DCDC2Q9UHG0 476 aa7.77□□□□□ -1.17
CAPN3-208ENST00000397204 CCL27Q9Y4X3 112 aa7.77□□□□□ -1.17
CAPN3-208ENST00000397204 POLR3HQ9Y535 204 aaPredicted RBP7.77□□□□□ -1.17
CAPN3-208ENST00000397204 MAGED1Q9Y5V3 778 aaPredicted RBP7.77□□□□□ -1.17
CAPN3-208ENST00000397204 ACTL7BQ9Y614 415 aa7.77□□□□□ -1.17
CAPN3-208ENST00000397204 GIMAP1-GIMAP5A0A087WTJ2 511 aa7.76□□□□□ -1.17
CAPN3-208ENST00000397204 EXOC1LA0A1B0GW35 172 aa7.76□□□□□ -1.17
CAPN3-208ENST00000397204 ZNF814B7Z6K7 855 aa7.76□□□□□ -1.17
CAPN3-208ENST00000397204 SLC28A1O00337 649 aa7.76□□□□□ -1.17
CAPN3-208ENST00000397204 ZNF195O14628 629 aa7.76□□□□□ -1.17
CAPN3-208ENST00000397204 PDPK1O15530 556 aa7.76□□□□□ -1.17
CAPN3-208ENST00000397204 ADAM11O75078 769 aa7.76□□□□□ -1.17
CAPN3-208ENST00000397204 ALX3O95076 343 aa7.76□□□□□ -1.17
CAPN3-208ENST00000397204 ALOX5P09917 674 aa7.76□□□□□ -1.17
CAPN3-208ENST00000397204 FAM157CP0CG43 387 aa7.76□□□□□ -1.17
CAPN3-208ENST00000397204 ACP2P11117 423 aa7.76□□□□□ -1.17
CAPN3-208ENST00000397204 PRPH2P23942 346 aa7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms