RNA–Protein interactions for RNA: ENST00000397024.1

MCF2L-207, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5 BASIC

Gene MCF2L, Length 490 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-207ENST00000397024 HOXD1Q9GZZ0 328 aa16.84■□□□□ 0.29
MCF2L-207ENST00000397024 NEUROD4Q9HD90 331 aa16.84■□□□□ 0.29
MCF2L-207ENST00000397024 PAQR5Q9NXK6 330 aaPredicted RBP16.84■□□□□ 0.29
MCF2L-207ENST00000397024 ZNF226Q9NYT6 803 aa16.84■□□□□ 0.29
MCF2L-207ENST00000397024 NOP53Q9NZM5 478 aaKnown RBP16.84■□□□□ 0.29
MCF2L-207ENST00000397024 KCNE5Q9UJ90 142 aa16.84■□□□□ 0.29
MCF2L-207ENST00000397024 EMC9Q9Y3B6 208 aa16.84■□□□□ 0.29
MCF2L-207ENST00000397024 DTNAQ9Y4J8 743 aa16.84■□□□□ 0.29
MCF2L-207ENST00000397024 ACTL7BQ9Y614 415 aa16.84■□□□□ 0.29
MCF2L-207ENST00000397024 FREM1Q5H8C1 2179 aa16.84■□□□□ 0.29
MCF2L-207ENST00000397024 GTPBP1O00178 669 aaKnown RBP16.83■□□□□ 0.28
MCF2L-207ENST00000397024 ZNF195O14628 629 aa16.83■□□□□ 0.28
MCF2L-207ENST00000397024 BIRC5O15392 142 aa16.83■□□□□ 0.28
MCF2L-207ENST00000397024 RGS16O15492 202 aaPredicted RBP16.83■□□□□ 0.28
MCF2L-207ENST00000397024 FCMRO60667 390 aa16.83■□□□□ 0.28
MCF2L-207ENST00000397024 SCN2BO60939 215 aa16.83■□□□□ 0.28
MCF2L-207ENST00000397024 PLGP00747 810 aaPredicted RBP16.83■□□□□ 0.28
MCF2L-207ENST00000397024 KRT16P08779 473 aa16.83■□□□□ 0.28
MCF2L-207ENST00000397024 ME2P23368 584 aa16.83■□□□□ 0.28
MCF2L-207ENST00000397024 SOAT1P35610 550 aa16.83■□□□□ 0.28
MCF2L-207ENST00000397024 EIF1P41567 113 aaKnown RBP16.83■□□□□ 0.28
MCF2L-207ENST00000397024 CTBP2P56545 445 aa16.83■□□□□ 0.28
MCF2L-207ENST00000397024 MAD2L1Q13257 205 aaPredicted RBP16.83■□□□□ 0.28
MCF2L-207ENST00000397024 SMU1Q2TAY7 513 aa16.83■□□□□ 0.28
MCF2L-207ENST00000397024 STAC2Q6ZMT1 411 aa16.83■□□□□ 0.28
MCF2L-207ENST00000397024 ZNF527Q8NB42 609 aa16.83■□□□□ 0.28
MCF2L-207ENST00000397024 MOAP1Q96BY2 351 aa16.83■□□□□ 0.28
MCF2L-207ENST00000397024 ARSGQ96EG1 525 aa16.83■□□□□ 0.28
MCF2L-207ENST00000397024 CENPVL1A0A0U1RR11 272 aa16.82■□□□□ 0.28
MCF2L-207ENST00000397024 ESPNB1AK53 854 aa16.82■□□□□ 0.28
MCF2L-207ENST00000397024 KLF4O43474 513 aa16.82■□□□□ 0.28
MCF2L-207ENST00000397024 NTN1O95631 604 aa16.82■□□□□ 0.28
MCF2L-207ENST00000397024 NUDT14O95848 222 aa16.82■□□□□ 0.28
MCF2L-207ENST00000397024 MATN1P21941 496 aa16.82■□□□□ 0.28
MCF2L-207ENST00000397024 CASP9P55211 416 aa16.82■□□□□ 0.28
MCF2L-207ENST00000397024 TMEM176BQ3YBM2 270 aaPredicted RBP16.82■□□□□ 0.28
MCF2L-207ENST00000397024 TNFAIP8L3Q5GJ75 292 aa16.82■□□□□ 0.28
MCF2L-207ENST00000397024 ZNF614Q8N883 585 aa16.82■□□□□ 0.28
MCF2L-207ENST00000397024 ATP6V1C2Q8NEY4 427 aa16.82■□□□□ 0.28
MCF2L-207ENST00000397024 RFWD2Q8NHY2 731 aa16.82■□□□□ 0.28
MCF2L-207ENST00000397024 ZIM3Q96PE6 472 aa16.82■□□□□ 0.28
MCF2L-207ENST00000397024 BEX4Q9NWD9 120 aaPredicted RBP16.82■□□□□ 0.28
MCF2L-207ENST00000397024 EPB41L3Q9Y2J2 1087 aaPredicted RBP16.82■□□□□ 0.28
MCF2L-207ENST00000397024 RAP2CQ9Y3L5 183 aa16.82■□□□□ 0.28
MCF2L-207ENST00000397024 H3BNH8 94 aa16.81■□□□□ 0.28
MCF2L-207ENST00000397024 ANKRD28O15084 1053 aa16.81■□□□□ 0.28
MCF2L-207ENST00000397024 SOX30O94993 753 aa16.81■□□□□ 0.28
MCF2L-207ENST00000397024 C1QCP02747 245 aa16.81■□□□□ 0.28
MCF2L-207ENST00000397024 TUBBP07437 444 aa16.81■□□□□ 0.28
MCF2L-207ENST00000397024 MYZAPP0CAP1 466 aa16.81■□□□□ 0.28
MCF2L-207ENST00000397024 PRKCAP17252 672 aa16.81■□□□□ 0.28
MCF2L-207ENST00000397024 BGNP21810 368 aa16.81■□□□□ 0.28
MCF2L-207ENST00000397024 ADH6P28332 368 aa16.81■□□□□ 0.28
MCF2L-207ENST00000397024 AGTR1P30556 359 aa16.81■□□□□ 0.28
MCF2L-207ENST00000397024 SLC1A6P48664 564 aa16.81■□□□□ 0.28
MCF2L-207ENST00000397024 RPL14P50914 215 aaKnown RBP16.81■□□□□ 0.28
MCF2L-207ENST00000397024 NKX6-1P78426 367 aaPredicted RBP16.81■□□□□ 0.28
MCF2L-207ENST00000397024 GPR68Q15743 365 aa16.81■□□□□ 0.28
MCF2L-207ENST00000397024 ZNF239Q16600 458 aaKnown RBP16.81■□□□□ 0.28
MCF2L-207ENST00000397024 PDSS1Q5T2R2 415 aa16.81■□□□□ 0.28
MCF2L-207ENST00000397024 PDZK1Q5T2W1 519 aa16.81■□□□□ 0.28
MCF2L-207ENST00000397024 NUFIP2Q7Z417 695 aaKnown RBP16.81■□□□□ 0.28
MCF2L-207ENST00000397024 ANKRD46Q86W74 232 aa16.81■□□□□ 0.28
MCF2L-207ENST00000397024 OR8J2Q8NGG1 315 aa16.81■□□□□ 0.28
MCF2L-207ENST00000397024 ABHD3Q8WU67 409 aa16.81■□□□□ 0.28
MCF2L-207ENST00000397024 C12orf49Q9H741 205 aa16.81■□□□□ 0.28
MCF2L-207ENST00000397024 COQ10BQ9H8M1 238 aa16.81■□□□□ 0.28
MCF2L-207ENST00000397024 SSU72Q9NP77 194 aaKnown RBP16.81■□□□□ 0.28
MCF2L-207ENST00000397024 GLRX2Q9NS18 164 aa16.81■□□□□ 0.28
MCF2L-207ENST00000397024 PNPOQ9NVS9 261 aa16.81■□□□□ 0.28
MCF2L-207ENST00000397024 GPC6Q9Y625 555 aaPredicted RBP16.81■□□□□ 0.28
MCF2L-207ENST00000397024 DSCAMO60469 2012 aa16.8■□□□□ 0.28
MCF2L-207ENST00000397024 RNF103-CHMP3A0A140T963 221 aa16.8■□□□□ 0.28
MCF2L-207ENST00000397024 SERINC4A6NH21 518 aa16.8■□□□□ 0.28
MCF2L-207ENST00000397024 RNASET2O00584 256 aaKnown RBP16.8■□□□□ 0.28
MCF2L-207ENST00000397024 FOSL1P15407 271 aa16.8■□□□□ 0.28
MCF2L-207ENST00000397024 ELK4P28324 431 aa16.8■□□□□ 0.28
MCF2L-207ENST00000397024 SUMO3P55854 103 aaPredicted RBP16.8■□□□□ 0.28
MCF2L-207ENST00000397024 ACKR1Q16570 336 aa16.8■□□□□ 0.28
MCF2L-207ENST00000397024 SLC25A53Q5H9E4 307 aa16.8■□□□□ 0.28
MCF2L-207ENST00000397024 OR5W2Q8NH69 310 aa16.8■□□□□ 0.28
MCF2L-207ENST00000397024 RNF128Q8TEB7 428 aa16.8■□□□□ 0.28
MCF2L-207ENST00000397024 SMR3AQ99954 134 aa16.8■□□□□ 0.28
MCF2L-207ENST00000397024 NUF2Q9BZD4 464 aa16.8■□□□□ 0.28
MCF2L-207ENST00000397024 DPY30Q9C005 99 aa16.8■□□□□ 0.28
MCF2L-207ENST00000397024 NMUR2Q9GZQ4 415 aa16.8■□□□□ 0.28
MCF2L-207ENST00000397024 CENPHQ9H3R5 247 aa16.8■□□□□ 0.28
MCF2L-207ENST00000397024 UBTD1Q9HAC8 227 aa16.8■□□□□ 0.28
MCF2L-207ENST00000397024 HAO1Q9UJM8 370 aa16.8■□□□□ 0.28
MCF2L-207ENST00000397024 MKLN1Q9UL63 735 aa16.8■□□□□ 0.28
MCF2L-207ENST00000397024 ZANQ9Y493 2812 aa16.8■□□□□ 0.28
MCF2L-207ENST00000397024 TM9SF1O15321 606 aa16.79■□□□□ 0.28
MCF2L-207ENST00000397024 ZNF264O43296 627 aa16.79■□□□□ 0.28
MCF2L-207ENST00000397024 EIF4E2O60573 245 aaKnown RBP16.79■□□□□ 0.28
MCF2L-207ENST00000397024 CPSF4O95639 269 aaKnown RBP16.79■□□□□ 0.28
MCF2L-207ENST00000397024 QPRTQ15274 297 aa16.79■□□□□ 0.28
MCF2L-207ENST00000397024 ZNF141Q15928 474 aa16.79■□□□□ 0.28
MCF2L-207ENST00000397024 MAPK14Q16539 360 aa16.79■□□□□ 0.28
MCF2L-207ENST00000397024 ARHGAP11BQ3KRB8 267 aa16.79■□□□□ 0.28
MCF2L-207ENST00000397024 CEP85LQ5SZL2 805 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms