RNA–Protein interactions for RNA: ENST00000396832.5

CSNK1E-203, Transcript of casein kinase 1 epsilon, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSNK1E, Length 2,791 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-203ENST00000396832 SLC22A10Q63ZE4 541 aa22.33■■□□□ 1.16
CSNK1E-203ENST00000396832 FCRLBQ6BAA4 426 aa22.33■■□□□ 1.16
CSNK1E-203ENST00000396832 CDC73Q6P1J9 531 aa22.33■■□□□ 1.16
CSNK1E-203ENST00000396832 SEZ6L2Q6UXD5 910 aa22.33■■□□□ 1.16
CSNK1E-203ENST00000396832 ESPNLQ6ZVH7 1005 aa22.33■■□□□ 1.16
CSNK1E-203ENST00000396832 ALG8Q9BVK2 526 aa22.33■■□□□ 1.16
CSNK1E-203ENST00000396832 ZCCHC2Q9C0B9 1178 aaKnown RBP22.33■■□□□ 1.16
CSNK1E-203ENST00000396832 AICDAQ9GZX7 198 aa22.33■■□□□ 1.16
CSNK1E-203ENST00000396832 OR52A5Q9H2C5 316 aa22.33■■□□□ 1.16
CSNK1E-203ENST00000396832 COL4A3Q01955 1670 aa22.32■■□□□ 1.16
CSNK1E-203ENST00000396832 SPEGQ15772 3267 aa22.32■■□□□ 1.16
CSNK1E-203ENST00000396832 A0A1W2PPK0 400 aa22.32■■□□□ 1.16
CSNK1E-203ENST00000396832 PITPNAQ00169 270 aa22.32■■□□□ 1.16
CSNK1E-203ENST00000396832 LCTLQ6UWM7 567 aa22.32■■□□□ 1.16
CSNK1E-203ENST00000396832 CPOQ8IVL8 374 aa22.32■■□□□ 1.16
CSNK1E-203ENST00000396832 OR5W2Q8NH69 310 aa22.32■■□□□ 1.16
CSNK1E-203ENST00000396832 DPYSL5Q9BPU6 564 aa22.32■■□□□ 1.16
CSNK1E-203ENST00000396832 ATG2BQ96BY7 2078 aa22.32■■□□□ 1.16
CSNK1E-203ENST00000396832 RANBP2P49792 3224 aaKnown RBP22.32■■□□□ 1.16
CSNK1E-203ENST00000396832 TCRBV16S1A1N1A0A5B0 115 aa22.32■■□□□ 1.16
CSNK1E-203ENST00000396832 CARNS1A5YM72 827 aa22.32■■□□□ 1.16
CSNK1E-203ENST00000396832 LRRN3E7EW58 273 aa22.32■■□□□ 1.16
CSNK1E-203ENST00000396832 C18orf63Q68DL7 685 aa22.32■■□□□ 1.16
CSNK1E-203ENST00000396832 DGLUCYQ7Z3D6 616 aa22.32■■□□□ 1.16
CSNK1E-203ENST00000396832 ACBD7Q8N6N7 88 aa22.32■■□□□ 1.16
CSNK1E-203ENST00000396832 KREMEN2Q8NCW0 462 aa22.32■■□□□ 1.16
CSNK1E-203ENST00000396832 LGR4Q9BXB1 951 aa22.32■■□□□ 1.16
CSNK1E-203ENST00000396832 TEX12Q9BXU0 123 aa22.32■■□□□ 1.16
CSNK1E-203ENST00000396832 LRRN3Q9H3W5 708 aa22.32■■□□□ 1.16
CSNK1E-203ENST00000396832 MED9Q9NWA0 146 aa22.32■■□□□ 1.16
CSNK1E-203ENST00000396832 MRPL15Q9P015 296 aaKnown RBP22.32■■□□□ 1.16
CSNK1E-203ENST00000396832 A0A0B4J203 849 aa22.31■■□□□ 1.16
CSNK1E-203ENST00000396832 PLSCR5A0PG75 271 aa22.31■■□□□ 1.16
CSNK1E-203ENST00000396832 KLF9Q13886 244 aaPredicted RBP22.31■■□□□ 1.16
CSNK1E-203ENST00000396832 GPR68Q15743 365 aa22.31■■□□□ 1.16
CSNK1E-203ENST00000396832 DEFB115Q30KQ5 88 aa22.31■■□□□ 1.16
CSNK1E-203ENST00000396832 SFRP5Q5T4F7 317 aa22.31■■□□□ 1.16
CSNK1E-203ENST00000396832 TPRA1Q86W33 373 aa22.31■■□□□ 1.16
CSNK1E-203ENST00000396832 OSTF1Q92882 214 aa22.31■■□□□ 1.16
CSNK1E-203ENST00000396832 ARRDC3Q96B67 414 aa22.31■■□□□ 1.16
CSNK1E-203ENST00000396832 TIMP4Q99727 224 aa22.31■■□□□ 1.16
CSNK1E-203ENST00000396832 C7orf50Q9BRJ6 194 aaKnown RBP22.31■■□□□ 1.16
CSNK1E-203ENST00000396832 C6orf106Q9H6K1 298 aaPredicted RBP22.31■■□□□ 1.16
CSNK1E-203ENST00000396832 WDR26Q9H7D7 661 aa22.31■■□□□ 1.16
CSNK1E-203ENST00000396832 SLC35C2Q9NQQ7 365 aa22.31■■□□□ 1.16
CSNK1E-203ENST00000396832 PFDN2Q9UHV9 154 aa22.31■■□□□ 1.16
CSNK1E-203ENST00000396832 FCMRO60667 390 aa22.31■■□□□ 1.16
CSNK1E-203ENST00000396832 FGBP02675 491 aa22.31■■□□□ 1.16
CSNK1E-203ENST00000396832 OMPP47874 163 aa22.31■■□□□ 1.16
CSNK1E-203ENST00000396832 CCR8P51685 355 aa22.31■■□□□ 1.16
CSNK1E-203ENST00000396832 SLC3A1Q07837 685 aa22.31■■□□□ 1.16
CSNK1E-203ENST00000396832 LTB4RQ15722 352 aa22.31■■□□□ 1.16
CSNK1E-203ENST00000396832 PLBD1Q6P4A8 553 aa22.31■■□□□ 1.16
CSNK1E-203ENST00000396832 OR4D9Q8NGE8 314 aa22.31■■□□□ 1.16
CSNK1E-203ENST00000396832 PIGKQ92643 395 aa22.31■■□□□ 1.16
CSNK1E-203ENST00000396832 RGMAQ96B86 450 aa22.31■■□□□ 1.16
CSNK1E-203ENST00000396832 HINT3Q9NQE9 182 aaKnown RBP22.31■■□□□ 1.16
CSNK1E-203ENST00000396832 COL4A6Q14031 1691 aa22.3■■□□□ 1.16
CSNK1E-203ENST00000396832 J3QRE1 110 aa22.3■■□□□ 1.16
CSNK1E-203ENST00000396832 CDC42EP2O14613 210 aa22.3■■□□□ 1.16
CSNK1E-203ENST00000396832 PCCBP05166 539 aa22.3■■□□□ 1.16
CSNK1E-203ENST00000396832 MC3RP41968 323 aa22.3■■□□□ 1.16
CSNK1E-203ENST00000396832 RPS7P62081 194 aaKnown RBP22.3■■□□□ 1.16
CSNK1E-203ENST00000396832 C9orf64Q5T6V5 341 aa22.3■■□□□ 1.16
CSNK1E-203ENST00000396832 FAM46CQ5VWP2 391 aa22.3■■□□□ 1.16
CSNK1E-203ENST00000396832 ALKAL2Q6UX46 152 aa22.3■■□□□ 1.16
CSNK1E-203ENST00000396832 SYT9Q86SS6 491 aa22.3■■□□□ 1.16
CSNK1E-203ENST00000396832 SLITRK4Q8IW52 837 aa22.3■■□□□ 1.16
CSNK1E-203ENST00000396832 OR2L2Q8NH16 312 aa22.3■■□□□ 1.16
CSNK1E-203ENST00000396832 NXPE3Q969Y0 559 aa22.3■■□□□ 1.16
CSNK1E-203ENST00000396832 E9PI62 339 aa22.3■■□□□ 1.16
CSNK1E-203ENST00000396832 REM1O75628 298 aa22.3■■□□□ 1.16
CSNK1E-203ENST00000396832 SNRPBP14678 240 aaKnown RBP22.3■■□□□ 1.16
CSNK1E-203ENST00000396832 KHKP50053 298 aa22.3■■□□□ 1.16
CSNK1E-203ENST00000396832 RPTNQ6XPR3 784 aa22.3■■□□□ 1.16
CSNK1E-203ENST00000396832 BBS10Q8TAM1 723 aa22.3■■□□□ 1.16
CSNK1E-203ENST00000396832 ABHD4Q8TB40 342 aa22.3■■□□□ 1.16
CSNK1E-203ENST00000396832 CNRIP1Q96F85 164 aaPredicted RBP22.3■■□□□ 1.16
CSNK1E-203ENST00000396832 AHCYL2Q96HN2 611 aaKnown RBP22.3■■□□□ 1.16
CSNK1E-203ENST00000396832 SAMD8Q96LT4 415 aa22.3■■□□□ 1.16
CSNK1E-203ENST00000396832 SPATA5L1Q9BVQ7 753 aa22.3■■□□□ 1.16
CSNK1E-203ENST00000396832 OR10A4Q9H209 315 aa22.3■■□□□ 1.16
CSNK1E-203ENST00000396832 ATG4BQ9Y4P1 393 aa22.3■■□□□ 1.16
CSNK1E-203ENST00000396832 TRPM6Q9BX84 2022 aa22.3■■□□□ 1.16
CSNK1E-203ENST00000396832 SZT2Q5T011 3432 aa22.29■■□□□ 1.16
CSNK1E-203ENST00000396832 NOGQ13253 232 aa22.29■■□□□ 1.16
CSNK1E-203ENST00000396832 PGGHGQ32M88 737 aa22.29■■□□□ 1.16
CSNK1E-203ENST00000396832 DCUN1D3Q8IWE4 304 aa22.29■■□□□ 1.16
CSNK1E-203ENST00000396832 TMEM99Q8N816 258 aa22.29■■□□□ 1.16
CSNK1E-203ENST00000396832 OR11G2Q8NGC1 345 aa22.29■■□□□ 1.16
CSNK1E-203ENST00000396832 HAVCR2Q8TDQ0 301 aa22.29■■□□□ 1.16
CSNK1E-203ENST00000396832 ZNF416Q9BWM5 594 aa22.29■■□□□ 1.16
CSNK1E-203ENST00000396832 JAM3Q9BX67 310 aa22.29■■□□□ 1.16
CSNK1E-203ENST00000396832 POLMQ9NP87 494 aaPredicted RBP22.29■■□□□ 1.16
CSNK1E-203ENST00000396832 TRIM36Q9NQ86 728 aa22.29■■□□□ 1.16
CSNK1E-203ENST00000396832 EMC3Q9P0I2 261 aa22.29■■□□□ 1.16
CSNK1E-203ENST00000396832 MGAT4CQ9UBM8 478 aa22.29■■□□□ 1.16
CSNK1E-203ENST00000396832 PRKAG2Q9UGJ0 569 aa22.29■■□□□ 1.16
CSNK1E-203ENST00000396832 ING1Q9UK53 422 aaPredicted RBP22.29■■□□□ 1.16
CSNK1E-203ENST00000396832 SPTBP11277 2137 aa22.29■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms