RNA–Protein interactions for RNA: ENST00000396352.8

HOXA3-202, Transcript of homeobox A3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA3, Length 3,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA3-202ENST00000396352 NOS3P29474 1203 aa14.56□□□□□ -0.08
HOXA3-202ENST00000396352 ZNF85Q03923 595 aa14.56□□□□□ -0.08
HOXA3-202ENST00000396352 PDGFRLQ15198 375 aa14.56□□□□□ -0.08
HOXA3-202ENST00000396352 MRPL2Q5T653 305 aaKnown RBP14.56□□□□□ -0.08
HOXA3-202ENST00000396352 GARNL3Q5VVW2 1013 aa14.56□□□□□ -0.08
HOXA3-202ENST00000396352 RPTNQ6XPR3 784 aa14.56□□□□□ -0.08
HOXA3-202ENST00000396352 CEACAM19Q7Z692 300 aa14.56□□□□□ -0.08
HOXA3-202ENST00000396352 ASPGQ86U10 573 aa14.56□□□□□ -0.08
HOXA3-202ENST00000396352 TPRA1Q86W33 373 aa14.56□□□□□ -0.08
HOXA3-202ENST00000396352 RNF113BQ8IZP6 322 aaKnown RBP14.56□□□□□ -0.08
HOXA3-202ENST00000396352 HDDC3Q8N4P3 179 aa14.56□□□□□ -0.08
HOXA3-202ENST00000396352 OR13C2Q8NGS9 318 aa14.56□□□□□ -0.08
HOXA3-202ENST00000396352 TRMT10AQ8TBZ6 339 aaKnown RBP14.56□□□□□ -0.08
HOXA3-202ENST00000396352 SMAP2Q8WU79 429 aaPredicted RBP14.56□□□□□ -0.08
HOXA3-202ENST00000396352 CITED4Q96RK1 184 aa14.56□□□□□ -0.08
HOXA3-202ENST00000396352 NDC1Q9BTX1 674 aa14.56□□□□□ -0.08
HOXA3-202ENST00000396352 BTN3A3O00478 584 aa14.56□□□□□ -0.08
HOXA3-202ENST00000396352 CLUP10909 449 aa14.56□□□□□ -0.08
HOXA3-202ENST00000396352 SOX9P48436 509 aa14.56□□□□□ -0.08
HOXA3-202ENST00000396352 SLC3A1Q07837 685 aa14.56□□□□□ -0.08
HOXA3-202ENST00000396352 TRMT12Q53H54 448 aaKnown RBP14.56□□□□□ -0.08
HOXA3-202ENST00000396352 FCRLBQ6BAA4 426 aa14.56□□□□□ -0.08
HOXA3-202ENST00000396352 ADGRD2Q7Z7M1 963 aa14.56□□□□□ -0.08
HOXA3-202ENST00000396352 C4orf36Q96KX1 117 aa14.56□□□□□ -0.08
HOXA3-202ENST00000396352 PIGUQ9H490 435 aa14.56□□□□□ -0.08
HOXA3-202ENST00000396352 KIR3DX1Q9H7L2 352 aa14.56□□□□□ -0.08
HOXA3-202ENST00000396352 CACYBPQ9HB71 228 aaKnown RBP14.56□□□□□ -0.08
HOXA3-202ENST00000396352 FBXO34Q9NWN3 711 aa14.56□□□□□ -0.08
HOXA3-202ENST00000396352 MOSPD1Q9UJG1 213 aa14.56□□□□□ -0.08
HOXA3-202ENST00000396352 SIGLEC7Q9Y286 467 aa14.56□□□□□ -0.08
HOXA3-202ENST00000396352 SLC22A31A6NKX4 558 aa14.56□□□□□ -0.08
HOXA3-202ENST00000396352 POU2F2P09086 479 aa14.56□□□□□ -0.08
HOXA3-202ENST00000396352 BMP7P18075 431 aa14.56□□□□□ -0.08
HOXA3-202ENST00000396352 NDUFS1P28331 727 aa14.56□□□□□ -0.08
HOXA3-202ENST00000396352 SIM1P81133 766 aaPredicted RBP14.56□□□□□ -0.08
HOXA3-202ENST00000396352 EXOSC6Q5RKV6 272 aaKnown RBP14.56□□□□□ -0.08
HOXA3-202ENST00000396352 FHL5Q5TD97 284 aa14.56□□□□□ -0.08
HOXA3-202ENST00000396352 OR11H7Q8NGC8 314 aa14.56□□□□□ -0.08
HOXA3-202ENST00000396352 OR4K14Q8NGD5 310 aa14.56□□□□□ -0.08
HOXA3-202ENST00000396352 TTC9Q92623 222 aa14.56□□□□□ -0.08
HOXA3-202ENST00000396352 SMARCD2Q92925 531 aa14.56□□□□□ -0.08
HOXA3-202ENST00000396352 NUDT15Q9NV35 164 aa14.56□□□□□ -0.08
HOXA3-202ENST00000396352 SLCO1C1Q9NYB5 712 aa14.56□□□□□ -0.08
HOXA3-202ENST00000396352 PRR23D1E9PI22 279 aaPredicted RBP14.55□□□□□ -0.08
HOXA3-202ENST00000396352 PEX12O00623 359 aa14.55□□□□□ -0.08
HOXA3-202ENST00000396352 PRR23D2P0DMB1 279 aaPredicted RBP14.55□□□□□ -0.08
HOXA3-202ENST00000396352 IGFALSP35858 605 aa14.55□□□□□ -0.08
HOXA3-202ENST00000396352 OR3A3P47888 321 aa14.55□□□□□ -0.08
HOXA3-202ENST00000396352 PLAURQ03405 335 aa14.55□□□□□ -0.08
HOXA3-202ENST00000396352 TRAM1Q15629 374 aa14.55□□□□□ -0.08
HOXA3-202ENST00000396352 NTRK2Q16620 822 aa14.55□□□□□ -0.08
HOXA3-202ENST00000396352 ANKRD54Q6NXT1 300 aa14.55□□□□□ -0.08
HOXA3-202ENST00000396352 GPALPP1Q8IXQ4 340 aa14.55□□□□□ -0.08
HOXA3-202ENST00000396352 ZNF619Q8N2I2 560 aa14.55□□□□□ -0.08
HOXA3-202ENST00000396352 OR4E2Q8NGC2 313 aa14.55□□□□□ -0.08
HOXA3-202ENST00000396352 NT5CQ8TCD5 201 aa14.55□□□□□ -0.08
HOXA3-202ENST00000396352 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP14.55□□□□□ -0.081e-8■■■■□ 19.7
HOXA3-202ENST00000396352 KLF15Q9UIH9 416 aa14.55□□□□□ -0.08
HOXA3-202ENST00000396352 STON1Q9Y6Q2 735 aa14.55□□□□□ -0.08
HOXA3-202ENST00000396352 CDHR4A6H8M9 788 aa14.55□□□□□ -0.08
HOXA3-202ENST00000396352 PRR23AA6NEV1 266 aa14.55□□□□□ -0.08
HOXA3-202ENST00000396352 FZD7O75084 574 aa14.55□□□□□ -0.08
HOXA3-202ENST00000396352 SBK2P0C263 348 aa14.55□□□□□ -0.08
HOXA3-202ENST00000396352 NID1P14543 1247 aa14.55□□□□□ -0.08
HOXA3-202ENST00000396352 OR12D2P58182 307 aa14.55□□□□□ -0.08
HOXA3-202ENST00000396352 PYHIN1Q6K0P9 492 aa14.55□□□□□ -0.08
HOXA3-202ENST00000396352 TMPRSS11FQ6ZWK6 438 aa14.55□□□□□ -0.08
HOXA3-202ENST00000396352 OR5H6Q8NGV6 325 aa14.55□□□□□ -0.08
HOXA3-202ENST00000396352 DOK4Q8TEW6 326 aa14.55□□□□□ -0.08
HOXA3-202ENST00000396352 BPIFA2Q96DR5 249 aa14.55□□□□□ -0.08
HOXA3-202ENST00000396352 ARSGQ96EG1 525 aa14.55□□□□□ -0.08
HOXA3-202ENST00000396352 IFT27Q9BW83 186 aa14.55□□□□□ -0.08
HOXA3-202ENST00000396352 OR51V1Q9H2C8 321 aa14.55□□□□□ -0.08
HOXA3-202ENST00000396352 ERVMER34-1Q9H9K5 563 aa14.55□□□□□ -0.08
HOXA3-202ENST00000396352 ZFP64Q9NPA5 681 aa14.55□□□□□ -0.08
HOXA3-202ENST00000396352 FBXL4Q9UKA2 621 aa14.55□□□□□ -0.08
HOXA3-202ENST00000396352 TRAV6A0A075B6T7 132 aa14.54□□□□□ -0.08
HOXA3-202ENST00000396352 NPIPA5A0A0B4J1W7 369 aa14.54□□□□□ -0.08
HOXA3-202ENST00000396352 FAM86C2PA6NEL3 165 aa14.54□□□□□ -0.08
HOXA3-202ENST00000396352 NPIPA7E9PJI5 369 aa14.54□□□□□ -0.08
HOXA3-202ENST00000396352 P2RX6O15547 441 aa14.54□□□□□ -0.08
HOXA3-202ENST00000396352 KAT7O95251 611 aa14.54□□□□□ -0.08
HOXA3-202ENST00000396352 EML2O95834 649 aa14.54□□□□□ -0.08
HOXA3-202ENST00000396352 NPIPA8P0DM63 369 aa14.54□□□□□ -0.08
HOXA3-202ENST00000396352 RPS7P62081 194 aaKnown RBP14.54□□□□□ -0.08
HOXA3-202ENST00000396352 RPS15AP62244 130 aaKnown RBP14.54□□□□□ -0.08
HOXA3-202ENST00000396352 RUNX2Q13950 521 aa14.54□□□□□ -0.08
HOXA3-202ENST00000396352 DCST2Q5T1A1 773 aa14.54□□□□□ -0.08
HOXA3-202ENST00000396352 AMIGO1Q86WK6 493 aa14.54□□□□□ -0.08
HOXA3-202ENST00000396352 SHISA5Q8N114 240 aa14.54□□□□□ -0.08
HOXA3-202ENST00000396352 OR13C5Q8NGS8 318 aa14.54□□□□□ -0.08
HOXA3-202ENST00000396352 OR5J2Q8NH18 312 aa14.54□□□□□ -0.08
HOXA3-202ENST00000396352 ANGPTL6Q8NI99 470 aa14.54□□□□□ -0.08
HOXA3-202ENST00000396352 MED28Q9H204 178 aa14.54□□□□□ -0.08
HOXA3-202ENST00000396352 MEPEQ9NQ76 525 aaPredicted RBP14.54□□□□□ -0.08
HOXA3-202ENST00000396352 TMA7Q9Y2S6 64 aaKnown RBP14.54□□□□□ -0.08
HOXA3-202ENST00000396352 UNC80Q8N2C7 3258 aa14.54□□□□□ -0.08
HOXA3-202ENST00000396352 RCBTB2O95199 551 aa14.54□□□□□ -0.08
HOXA3-202ENST00000396352 DBIP07108 87 aaKnown RBP14.54□□□□□ -0.08
HOXA3-202ENST00000396352 ACVR1BP36896 505 aa14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms