RNA–Protein interactions for RNA: ENST00000395969.6

VPS41-203, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5 BASIC

Gene VPS41, Length 3,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-203ENST00000395969 CLDND1Q9NY35 253 aa4.99□□□□□ -1.61
VPS41-203ENST00000395969 TAS2R16Q9NYV7 291 aa4.99□□□□□ -1.61
VPS41-203ENST00000395969 FOXD3Q9UJU5 478 aaPredicted RBP4.99□□□□□ -1.61
VPS41-203ENST00000395969 GMEB2Q9UKD1 530 aa4.99□□□□□ -1.61
VPS41-203ENST00000395969 C19orf53Q9UNZ5 99 aaPredicted RBP4.99□□□□□ -1.61
VPS41-203ENST00000395969 CLDN16Q9Y5I7 305 aa4.99□□□□□ -1.61
VPS41-203ENST00000395969 CDH10Q9Y6N8 788 aa4.99□□□□□ -1.61
VPS41-203ENST00000395969 ENPP4Q9Y6X5 453 aa4.99□□□□□ -1.61
VPS41-203ENST00000395969 MYO10Q9HD67 2058 aa4.98□□□□□ -1.61
VPS41-203ENST00000395969 IGLV3-12A0A075B6K2 115 aa4.98□□□□□ -1.61
VPS41-203ENST00000395969 A0A1W2PQL4 384 aaPredicted RBP4.98□□□□□ -1.61
VPS41-203ENST00000395969 A0A1W2PRB8 838 aa4.98□□□□□ -1.61
VPS41-203ENST00000395969 A0A1W2PRG6 482 aa4.98□□□□□ -1.61
VPS41-203ENST00000395969 ANKRD61A6NGH8 418 aa4.98□□□□□ -1.61
VPS41-203ENST00000395969 LMO7DNF2Z398 122 aa4.98□□□□□ -1.61
VPS41-203ENST00000395969 NPIPB9F8W1W9 429 aa4.98□□□□□ -1.61
VPS41-203ENST00000395969 SIGLEC5O15389 551 aa4.98□□□□□ -1.61
VPS41-203ENST00000395969 CHP2O43745 196 aa4.98□□□□□ -1.61
VPS41-203ENST00000395969 LCMT2O60294 686 aaKnown RBP4.98□□□□□ -1.61
VPS41-203ENST00000395969 DIRAS1O95057 198 aa4.98□□□□□ -1.61
VPS41-203ENST00000395969 ZNF883P0CG24 379 aa4.98□□□□□ -1.61
VPS41-203ENST00000395969 UGT2B7P16662 529 aa4.98□□□□□ -1.61
VPS41-203ENST00000395969 HAAOP46952 286 aa4.98□□□□□ -1.61
VPS41-203ENST00000395969 TGM4P49221 684 aa4.98□□□□□ -1.61
VPS41-203ENST00000395969 BTG1P62324 171 aa4.98□□□□□ -1.61
VPS41-203ENST00000395969 S100A12P80511 92 aa4.98□□□□□ -1.61
VPS41-203ENST00000395969 SIGLEC14Q08ET2 396 aa4.98□□□□□ -1.61
VPS41-203ENST00000395969 MRPL28Q13084 256 aaKnown RBP4.98□□□□□ -1.61
VPS41-203ENST00000395969 EXOSC2Q13868 293 aaKnown RBP4.98□□□□□ -1.61
VPS41-203ENST00000395969 MED22Q15528 200 aa4.98□□□□□ -1.61
VPS41-203ENST00000395969 ISXQ2M1V0 245 aa4.98□□□□□ -1.61
VPS41-203ENST00000395969 LRRC73Q5JTD7 316 aa4.98□□□□□ -1.61
VPS41-203ENST00000395969 DOK6Q6PKX4 331 aa4.98□□□□□ -1.61
VPS41-203ENST00000395969 ABHD13Q7L211 337 aa4.98□□□□□ -1.61
VPS41-203ENST00000395969 ARMC10Q8N2F6 343 aa4.98□□□□□ -1.61
VPS41-203ENST00000395969 ZNF655Q8N720 491 aaPredicted RBP4.98□□□□□ -1.61
VPS41-203ENST00000395969 FAM71CQ8NEG0 241 aa4.98□□□□□ -1.61
VPS41-203ENST00000395969 ZNF431Q8TF32 576 aaPredicted RBP4.98□□□□□ -1.61
VPS41-203ENST00000395969 CREB3L1Q96BA8 519 aa4.98□□□□□ -1.61
VPS41-203ENST00000395969 ZNF354BQ96LW1 612 aa4.98□□□□□ -1.61
VPS41-203ENST00000395969 ZNF426Q9BUY5 554 aa4.98□□□□□ -1.61
VPS41-203ENST00000395969 SERHL2Q9H4I8 314 aa4.98□□□□□ -1.61
VPS41-203ENST00000395969 CXorf36Q9H7Y0 433 aa4.98□□□□□ -1.61
VPS41-203ENST00000395969 REEP1Q9H902 201 aa4.98□□□□□ -1.61
VPS41-203ENST00000395969 GALNT9Q9HCQ5 603 aa4.98□□□□□ -1.61
VPS41-203ENST00000395969 IFT46Q9NQC8 304 aa4.98□□□□□ -1.61
VPS41-203ENST00000395969 SNTG1Q9NSN8 517 aa4.98□□□□□ -1.61
VPS41-203ENST00000395969 NDUFB11Q9NX14 153 aa4.98□□□□□ -1.61
VPS41-203ENST00000395969 SEC14L4Q9UDX3 406 aa4.98□□□□□ -1.61
VPS41-203ENST00000395969 TAC3Q9UHF0 121 aa4.98□□□□□ -1.61
VPS41-203ENST00000395969 KCNMB2Q9Y691 235 aa4.98□□□□□ -1.61
VPS41-203ENST00000395969 A0A1B0GTQ1 180 aa4.98□□□□□ -1.61
VPS41-203ENST00000395969 DUXAA6NLW8 204 aa4.98□□□□□ -1.61
VPS41-203ENST00000395969 FAM25EA8MYX2 175 aa4.98□□□□□ -1.61
VPS41-203ENST00000395969 C4orf51C9J302 202 aa4.98□□□□□ -1.61
VPS41-203ENST00000395969 SGK494L7N484 410 aa4.98□□□□□ -1.61
VPS41-203ENST00000395969 TO15178 435 aa4.98□□□□□ -1.61
VPS41-203ENST00000395969 LYRM1O43325 122 aa4.98□□□□□ -1.61
VPS41-203ENST00000395969 ZNF749O43361 778 aa4.98□□□□□ -1.61
VPS41-203ENST00000395969 EMC8O43402 210 aa4.98□□□□□ -1.61
VPS41-203ENST00000395969 ORC5O43913 435 aa4.98□□□□□ -1.61
VPS41-203ENST00000395969 GALR3O60755 368 aaPredicted RBP4.98□□□□□ -1.61
VPS41-203ENST00000395969 PTP4A3O75365 173 aa4.98□□□□□ -1.61
VPS41-203ENST00000395969 ZNF254O75437 659 aa4.98□□□□□ -1.61
VPS41-203ENST00000395969 MPC2O95563 127 aa4.98□□□□□ -1.61
VPS41-203ENST00000395969 ADAP00813 363 aa4.98□□□□□ -1.61
VPS41-203ENST00000395969 IFNA7P01567 189 aa4.98□□□□□ -1.61
VPS41-203ENST00000395969 IL3P08700 152 aa4.98□□□□□ -1.61
VPS41-203ENST00000395969 PTBP1P26599 531 aaKnown RBP eCLIP4.98□□□□□ -1.611e-6■■■□□ 17.6
VPS41-203ENST00000395969 CNR2P34972 360 aa4.98□□□□□ -1.61
VPS41-203ENST00000395969 ARHGDIBP52566 201 aa4.98□□□□□ -1.61
VPS41-203ENST00000395969 RAB38P57729 211 aa4.98□□□□□ -1.61
VPS41-203ENST00000395969 TAS2R50P59544 299 aa4.98□□□□□ -1.61
VPS41-203ENST00000395969 RUNX1T1Q06455 604 aa4.98□□□□□ -1.61
VPS41-203ENST00000395969 FUT5Q11128 374 aa4.98□□□□□ -1.61
VPS41-203ENST00000395969 DUSP8Q13202 625 aa4.98□□□□□ -1.61
VPS41-203ENST00000395969 SLC9A5Q14940 896 aa4.98□□□□□ -1.61
VPS41-203ENST00000395969 SEC23BQ15437 767 aa4.98□□□□□ -1.61
VPS41-203ENST00000395969 MICAQ29983 383 aa4.98□□□□□ -1.61
VPS41-203ENST00000395969 IFI44LQ53G44 452 aa4.98□□□□□ -1.61
VPS41-203ENST00000395969 KLHL12Q53G59 568 aa4.98□□□□□ -1.61
VPS41-203ENST00000395969 C12orf73Q69YU5 71 aa4.98□□□□□ -1.61
VPS41-203ENST00000395969 PLAG1Q6DJT9 500 aa4.98□□□□□ -1.61
VPS41-203ENST00000395969 LINC00114Q6XXX2 140 aa4.98□□□□□ -1.61
VPS41-203ENST00000395969 TRILQ7L0X0 811 aa4.98□□□□□ -1.61
VPS41-203ENST00000395969 RABEPKQ7Z6M1 372 aa4.98□□□□□ -1.61
VPS41-203ENST00000395969 ACOT4Q8N9L9 421 aa4.98□□□□□ -1.61
VPS41-203ENST00000395969 OR11H4Q8NGC9 324 aa4.98□□□□□ -1.61
VPS41-203ENST00000395969 OR4A15Q8NGL6 344 aa4.98□□□□□ -1.61
VPS41-203ENST00000395969 OR14C36Q8NHC7 312 aa4.98□□□□□ -1.61
VPS41-203ENST00000395969 FCRL4Q96PJ5 515 aa4.98□□□□□ -1.61
VPS41-203ENST00000395969 RBP7Q96R05 134 aa4.98□□□□□ -1.61
VPS41-203ENST00000395969 PIP5K1AQ99755 562 aa4.98□□□□□ -1.61
VPS41-203ENST00000395969 MAPKAP1Q9BPZ7 522 aa4.98□□□□□ -1.61
VPS41-203ENST00000395969 SLC35A5Q9BS91 424 aa4.98□□□□□ -1.61
VPS41-203ENST00000395969 ZNF350Q9GZX5 532 aa4.98□□□□□ -1.61
VPS41-203ENST00000395969 LDAHQ9H6V9 325 aa4.98□□□□□ -1.61
VPS41-203ENST00000395969 EMC7Q9NPA0 242 aa4.98□□□□□ -1.61
VPS41-203ENST00000395969 APOBEC3BQ9UH17 382 aaKnown RBP4.98□□□□□ -1.61
VPS41-203ENST00000395969 GLS2Q9UI32 602 aa4.98□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms