RNA–Protein interactions for RNA: ENST00000395794.2

CXCL12-205, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 1 (best) BASIC

Gene CXCL12, Length 1,052 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-205ENST00000395794 CLEC4FQ8N1N0 589 aa12.34□□□□□ -0.43
CXCL12-205ENST00000395794 TRIML2Q8N7C3 387 aa12.34□□□□□ -0.43
CXCL12-205ENST00000395794 CHDHQ8NE62 594 aaPredicted RBP12.34□□□□□ -0.43
CXCL12-205ENST00000395794 GMPPAQ96IJ6 420 aaPredicted RBP12.34□□□□□ -0.43
CXCL12-205ENST00000395794 KLHL15Q96M94 604 aa12.34□□□□□ -0.43
CXCL12-205ENST00000395794 MED18Q9BUE0 208 aa12.34□□□□□ -0.43
CXCL12-205ENST00000395794 NMUR2Q9GZQ4 415 aa12.34□□□□□ -0.43
CXCL12-205ENST00000395794 OPN3Q9H1Y3 402 aaPredicted RBP12.34□□□□□ -0.43
CXCL12-205ENST00000395794 OR51I1Q9H343 314 aa12.34□□□□□ -0.43
CXCL12-205ENST00000395794 ICAM5Q9UMF0 924 aa12.34□□□□□ -0.43
CXCL12-205ENST00000395794 POLQO75417 2590 aa12.34□□□□□ -0.43
CXCL12-205ENST00000395794 KIAA1549Q9HCM3 1950 aa12.34□□□□□ -0.43
CXCL12-205ENST00000395794 SERINC4A6NH21 518 aa12.33□□□□□ -0.44
CXCL12-205ENST00000395794 NPIPB9F8W1W9 429 aa12.33□□□□□ -0.44
CXCL12-205ENST00000395794 C16orf97H3BN30 126 aa12.33□□□□□ -0.44
CXCL12-205ENST00000395794 ZNF195O14628 629 aa12.33□□□□□ -0.44
CXCL12-205ENST00000395794 CYP7B1O75881 506 aa12.33□□□□□ -0.44
CXCL12-205ENST00000395794 AQP8O94778 261 aa12.33□□□□□ -0.44
CXCL12-205ENST00000395794 KITP10721 976 aa12.33□□□□□ -0.44
CXCL12-205ENST00000395794 PSMA4P25789 261 aaKnown RBP12.33□□□□□ -0.44
CXCL12-205ENST00000395794 SFTPDP35247 375 aa12.33□□□□□ -0.44
CXCL12-205ENST00000395794 KHKP50053 298 aa12.33□□□□□ -0.44
CXCL12-205ENST00000395794 ANXA11P50995 505 aaKnown RBP12.33□□□□□ -0.44
CXCL12-205ENST00000395794 NME5P56597 212 aa12.33□□□□□ -0.44
CXCL12-205ENST00000395794 WDR4P57081 412 aaKnown RBP12.33□□□□□ -0.44
CXCL12-205ENST00000395794 HPCAP84074 193 aa12.33□□□□□ -0.44
CXCL12-205ENST00000395794 LRRC74AQ0VAA2 488 aa12.33□□□□□ -0.44
CXCL12-205ENST00000395794 FOXF1Q12946 379 aa12.33□□□□□ -0.44
CXCL12-205ENST00000395794 TESK1Q15569 626 aa12.33□□□□□ -0.44
CXCL12-205ENST00000395794 SPANXN4Q5MJ08 99 aa12.33□□□□□ -0.44
CXCL12-205ENST00000395794 DDX59Q5T1V6 619 aaKnown RBP eCLIP12.33□□□□□ -0.44
CXCL12-205ENST00000395794 PDZK1Q5T2W1 519 aa12.33□□□□□ -0.44
CXCL12-205ENST00000395794 NXNQ6DKJ4 435 aa12.33□□□□□ -0.44
CXCL12-205ENST00000395794 CBLN3Q6UW01 205 aa12.33□□□□□ -0.44
CXCL12-205ENST00000395794 EIF3MQ7L2H7 374 aaKnown RBP12.33□□□□□ -0.44
CXCL12-205ENST00000395794 STK32CQ86UX6 486 aa12.33□□□□□ -0.44
CXCL12-205ENST00000395794 ZNF610Q8N9Z0 462 aa12.33□□□□□ -0.44
CXCL12-205ENST00000395794 OR6K3Q8NGY3 331 aa12.33□□□□□ -0.44
CXCL12-205ENST00000395794 OR5W2Q8NH69 310 aa12.33□□□□□ -0.44
CXCL12-205ENST00000395794 FBXO27Q8NI29 283 aa12.33□□□□□ -0.44
CXCL12-205ENST00000395794 POC1BQ8TC44 478 aa12.33□□□□□ -0.44
CXCL12-205ENST00000395794 MIPOL1Q8TD10 442 aa12.33□□□□□ -0.44
CXCL12-205ENST00000395794 XAGE5Q8WWM1 108 aa12.33□□□□□ -0.44
CXCL12-205ENST00000395794 OSTF1Q92882 214 aa12.33□□□□□ -0.44
CXCL12-205ENST00000395794 MRGPRX4Q96LA9 322 aa12.33□□□□□ -0.44
CXCL12-205ENST00000395794 PANX1Q96RD7 426 aa12.33□□□□□ -0.44
CXCL12-205ENST00000395794 FOXC2Q99958 501 aa12.33□□□□□ -0.44
CXCL12-205ENST00000395794 SLC35A5Q9BS91 424 aa12.33□□□□□ -0.44
CXCL12-205ENST00000395794 MANSC1Q9H8J5 431 aa12.33□□□□□ -0.44
CXCL12-205ENST00000395794 CCM2LQ9NUG4 571 aaPredicted RBP12.33□□□□□ -0.44
CXCL12-205ENST00000395794 MARCOQ9UEW3 520 aaPredicted RBP12.33□□□□□ -0.44
CXCL12-205ENST00000395794 ANKRD17O75179 2603 aaKnown RBP12.33□□□□□ -0.44
CXCL12-205ENST00000395794 AKAP9Q99996 3911 aa12.32□□□□□ -0.44
CXCL12-205ENST00000395794 A0A0J9YW62 118 aa12.32□□□□□ -0.44
CXCL12-205ENST00000395794 GOLGA8QA0A0J9YX86 632 aa12.32□□□□□ -0.44
CXCL12-205ENST00000395794 GOLGA8OA6NCC3 632 aa12.32□□□□□ -0.44
CXCL12-205ENST00000395794 GOLGA8NF8WBI6 632 aa12.32□□□□□ -0.44
CXCL12-205ENST00000395794 SDHDO14521 159 aa12.32□□□□□ -0.44
CXCL12-205ENST00000395794 ANKRD28O15084 1053 aa12.32□□□□□ -0.44
CXCL12-205ENST00000395794 FCMRO60667 390 aa12.32□□□□□ -0.44
CXCL12-205ENST00000395794 SS18L1O75177 396 aaPredicted RBP12.32□□□□□ -0.44
CXCL12-205ENST00000395794 CSTAP01040 98 aa12.32□□□□□ -0.44
CXCL12-205ENST00000395794 OR12D1P0DN82 309 aa12.32□□□□□ -0.44
CXCL12-205ENST00000395794 EPHA3P29320 983 aa12.32□□□□□ -0.44
CXCL12-205ENST00000395794 SLC7A1P30825 629 aa12.32□□□□□ -0.44
CXCL12-205ENST00000395794 UGT2B10P36537 528 aa12.32□□□□□ -0.44
CXCL12-205ENST00000395794 SLC6A8P48029 635 aa12.32□□□□□ -0.44
CXCL12-205ENST00000395794 CASP9P55211 416 aa12.32□□□□□ -0.44
CXCL12-205ENST00000395794 KEAP1Q14145 624 aa12.32□□□□□ -0.44
CXCL12-205ENST00000395794 CASP8Q14790 479 aa12.32□□□□□ -0.44
CXCL12-205ENST00000395794 POU4F3Q15319 338 aa12.32□□□□□ -0.44
CXCL12-205ENST00000395794 ZNF141Q15928 474 aa12.32□□□□□ -0.44
CXCL12-205ENST00000395794 EXOC3L2Q2M3D2 409 aa12.32□□□□□ -0.44
CXCL12-205ENST00000395794 TNFAIP8L2Q6P589 184 aaPredicted RBP12.32□□□□□ -0.44
CXCL12-205ENST00000395794 ZNF474Q6S9Z5 364 aaPredicted RBP12.32□□□□□ -0.44
CXCL12-205ENST00000395794 ATP6V1C2Q8NEY4 427 aa12.32□□□□□ -0.44
CXCL12-205ENST00000395794 GPR119Q8TDV5 335 aa12.32□□□□□ -0.44
CXCL12-205ENST00000395794 OIT3Q8WWZ8 545 aa12.32□□□□□ -0.44
CXCL12-205ENST00000395794 TMEM234Q8WY98 164 aa12.32□□□□□ -0.44
CXCL12-205ENST00000395794 CPNE4Q96A23 557 aaPredicted RBP12.32□□□□□ -0.44
CXCL12-205ENST00000395794 NEURL3Q96EH8 262 aa12.32□□□□□ -0.44
CXCL12-205ENST00000395794 ADGRG7Q96K78 797 aa12.32□□□□□ -0.44
CXCL12-205ENST00000395794 OR52E6Q96RD3 313 aa12.32□□□□□ -0.44
CXCL12-205ENST00000395794 NPAS1Q99742 590 aa12.32□□□□□ -0.44
CXCL12-205ENST00000395794 KLHL4Q9C0H6 718 aa12.32□□□□□ -0.44
CXCL12-205ENST00000395794 WDR55Q9H6Y2 383 aaPredicted RBP12.32□□□□□ -0.44
CXCL12-205ENST00000395794 TMBIM4Q9HC24 238 aa12.32□□□□□ -0.44
CXCL12-205ENST00000395794 POLE3Q9NRF9 147 aa12.32□□□□□ -0.44
CXCL12-205ENST00000395794 SERINC1Q9NRX5 453 aa12.32□□□□□ -0.44
CXCL12-205ENST00000395794 AIG1Q9NVV5 245 aa12.32□□□□□ -0.44
CXCL12-205ENST00000395794 KLHL28Q9NXS3 571 aa12.32□□□□□ -0.44
CXCL12-205ENST00000395794 BTNL2Q9UIR0 455 aa12.32□□□□□ -0.44
CXCL12-205ENST00000395794 MKLN1Q9UL63 735 aa12.32□□□□□ -0.44
CXCL12-205ENST00000395794 CLEC4AQ9UMR7 237 aa12.32□□□□□ -0.44
CXCL12-205ENST00000395794 PLEKHA6Q9Y2H5 1048 aa12.32□□□□□ -0.44
CXCL12-205ENST00000395794 WDR45Q9Y484 360 aa12.32□□□□□ -0.44
CXCL12-205ENST00000395794 TESMINQ9Y4I5 508 aa12.32□□□□□ -0.44
CXCL12-205ENST00000395794 DOCK7Q96N67 2140 aa12.32□□□□□ -0.44
CXCL12-205ENST00000395794 MED12Q93074 2177 aa12.32□□□□□ -0.44
CXCL12-205ENST00000395794 OIP5O43482 229 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms