RNA–Protein interactions for RNA: ENST00000395793.7

CXCL12-204, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 5 BASIC

Gene CXCL12, Length 665 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-204ENST00000395793 ABHD3Q8WU67 409 aa16.1■□□□□ 0.17
CXCL12-204ENST00000395793 SDF2Q99470 211 aa16.1■□□□□ 0.17
CXCL12-204ENST00000395793 KCNE5Q9UJ90 142 aa16.1■□□□□ 0.17
CXCL12-204ENST00000395793 ACTL7BQ9Y614 415 aa16.1■□□□□ 0.17
CXCL12-204ENST00000395793 NAV3Q8IVL0 2385 aa16.1■□□□□ 0.17
CXCL12-204ENST00000395793 ESPNB1AK53 854 aa16.09■□□□□ 0.17
CXCL12-204ENST00000395793 CFLARO15519 480 aa16.09■□□□□ 0.17
CXCL12-204ENST00000395793 KLF4O43474 513 aa16.09■□□□□ 0.17
CXCL12-204ENST00000395793 NTN1O95631 604 aa16.09■□□□□ 0.17
CXCL12-204ENST00000395793 PRKCAP17252 672 aa16.09■□□□□ 0.17
CXCL12-204ENST00000395793 ME2P23368 584 aa16.09■□□□□ 0.17
CXCL12-204ENST00000395793 ELK4P28324 431 aa16.09■□□□□ 0.17
CXCL12-204ENST00000395793 NKX6-1P78426 367 aaPredicted RBP16.09■□□□□ 0.17
CXCL12-204ENST00000395793 CHI3L2Q15782 390 aa16.09■□□□□ 0.17
CXCL12-204ENST00000395793 ACKR1Q16570 336 aa16.09■□□□□ 0.17
CXCL12-204ENST00000395793 KRT71Q3SY84 523 aa16.09■□□□□ 0.17
CXCL12-204ENST00000395793 NATD1Q8N6N6 113 aa16.09■□□□□ 0.17
CXCL12-204ENST00000395793 ZNF614Q8N883 585 aa16.09■□□□□ 0.17
CXCL12-204ENST00000395793 ZNF527Q8NB42 609 aa16.09■□□□□ 0.17
CXCL12-204ENST00000395793 GPR119Q8TDV5 335 aa16.09■□□□□ 0.17
CXCL12-204ENST00000395793 RNF128Q8TEB7 428 aa16.09■□□□□ 0.17
CXCL12-204ENST00000395793 MOAP1Q96BY2 351 aa16.09■□□□□ 0.17
CXCL12-204ENST00000395793 SORT1Q99523 831 aa16.09■□□□□ 0.17
CXCL12-204ENST00000395793 HOXD1Q9GZZ0 328 aa16.09■□□□□ 0.17
CXCL12-204ENST00000395793 C12orf49Q9H741 205 aa16.09■□□□□ 0.17
CXCL12-204ENST00000395793 NIPBLQ6KC79 2804 aaeCLIP16.08■□□□□ 0.16
CXCL12-204ENST00000395793 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP16.08■□□□□ 0.16
CXCL12-204ENST00000395793 ZNF195O14628 629 aa16.08■□□□□ 0.16
CXCL12-204ENST00000395793 SCN2BO60939 215 aa16.08■□□□□ 0.16
CXCL12-204ENST00000395793 NUDT14O95848 222 aa16.08■□□□□ 0.16
CXCL12-204ENST00000395793 SERPINE1P05121 402 aa16.08■□□□□ 0.16
CXCL12-204ENST00000395793 TUBBP07437 444 aa16.08■□□□□ 0.16
CXCL12-204ENST00000395793 KRT16P08779 473 aa16.08■□□□□ 0.16
CXCL12-204ENST00000395793 DHRS4L1P0CG22 281 aa16.08■□□□□ 0.16
CXCL12-204ENST00000395793 EIF1P41567 113 aaKnown RBP16.08■□□□□ 0.16
CXCL12-204ENST00000395793 SUMO3P55854 103 aaPredicted RBP16.08■□□□□ 0.16
CXCL12-204ENST00000395793 PHC1P78364 1004 aa16.08■□□□□ 0.16
CXCL12-204ENST00000395793 MPP2Q14168 576 aa16.08■□□□□ 0.16
CXCL12-204ENST00000395793 PGS1Q32NB8 556 aa16.08■□□□□ 0.16
CXCL12-204ENST00000395793 KRTAP21-3Q3LHN1 58 aa16.08■□□□□ 0.16
CXCL12-204ENST00000395793 PDZK1Q5T2W1 519 aa16.08■□□□□ 0.16
CXCL12-204ENST00000395793 NUFIP2Q7Z417 695 aaKnown RBP16.08■□□□□ 0.16
CXCL12-204ENST00000395793 PPP1R14CQ8TAE6 165 aa16.08■□□□□ 0.16
CXCL12-204ENST00000395793 ZBTB9Q96C00 473 aa16.08■□□□□ 0.16
CXCL12-204ENST00000395793 PRPF18Q99633 342 aaKnown RBP16.08■□□□□ 0.16
CXCL12-204ENST00000395793 PIP5K1AQ99755 562 aa16.08■□□□□ 0.16
CXCL12-204ENST00000395793 AKTIPQ9H8T0 292 aa16.08■□□□□ 0.16
CXCL12-204ENST00000395793 NOP53Q9NZM5 478 aaKnown RBP16.08■□□□□ 0.16
CXCL12-204ENST00000395793 DTNAQ9Y4J8 743 aa16.08■□□□□ 0.16
CXCL12-204ENST00000395793 ANKRD28O15084 1053 aa16.07■□□□□ 0.16
CXCL12-204ENST00000395793 PLAUP00749 431 aa16.07■□□□□ 0.16
CXCL12-204ENST00000395793 C1QCP02747 245 aa16.07■□□□□ 0.16
CXCL12-204ENST00000395793 ADH6P28332 368 aa16.07■□□□□ 0.16
CXCL12-204ENST00000395793 CASP9P55211 416 aa16.07■□□□□ 0.16
CXCL12-204ENST00000395793 CARD18P57730 90 aa16.07■□□□□ 0.16
CXCL12-204ENST00000395793 ABCE1P61221 599 aaKnown RBP16.07■□□□□ 0.16
CXCL12-204ENST00000395793 MAD2L1Q13257 205 aaPredicted RBP16.07■□□□□ 0.16
CXCL12-204ENST00000395793 SLC25A53Q5H9E4 307 aa16.07■□□□□ 0.16
CXCL12-204ENST00000395793 Q5PR19 223 aa16.07■□□□□ 0.16
CXCL12-204ENST00000395793 PDSS1Q5T2R2 415 aa16.07■□□□□ 0.16
CXCL12-204ENST00000395793 C6orf120Q7Z4R8 191 aa16.07■□□□□ 0.16
CXCL12-204ENST00000395793 RFWD2Q8NHY2 731 aa16.07■□□□□ 0.16
CXCL12-204ENST00000395793 SLC35G5Q96KT7 338 aa16.07■□□□□ 0.16
CXCL12-204ENST00000395793 GLRX2Q9NS18 164 aa16.07■□□□□ 0.16
CXCL12-204ENST00000395793 GPC6Q9Y625 555 aaPredicted RBP16.07■□□□□ 0.16
CXCL12-204ENST00000395793 UQCRHLA0A096LP55 91 aa16.06■□□□□ 0.16
CXCL12-204ENST00000395793 RNF103-CHMP3A0A140T963 221 aa16.06■□□□□ 0.16
CXCL12-204ENST00000395793 GTPBP1O00178 669 aaKnown RBP16.06■□□□□ 0.16
CXCL12-204ENST00000395793 ETV2O00321 342 aaPredicted RBP16.06■□□□□ 0.16
CXCL12-204ENST00000395793 FCMRO60667 390 aa16.06■□□□□ 0.16
CXCL12-204ENST00000395793 SMPD2O60906 423 aa16.06■□□□□ 0.16
CXCL12-204ENST00000395793 GCM2O75603 506 aaPredicted RBP16.06■□□□□ 0.16
CXCL12-204ENST00000395793 UBL4AP11441 157 aa16.06■□□□□ 0.16
CXCL12-204ENST00000395793 MATN1P21941 496 aa16.06■□□□□ 0.16
CXCL12-204ENST00000395793 FUT5Q11128 374 aa16.06■□□□□ 0.16
CXCL12-204ENST00000395793 SKP2Q13309 424 aa16.06■□□□□ 0.16
CXCL12-204ENST00000395793 TSC22D1Q15714 1073 aa16.06■□□□□ 0.16
CXCL12-204ENST00000395793 SMU1Q2TAY7 513 aa16.06■□□□□ 0.16
CXCL12-204ENST00000395793 TMEM176BQ3YBM2 270 aaPredicted RBP16.06■□□□□ 0.16
CXCL12-204ENST00000395793 SHEQ5VZ18 495 aa16.06■□□□□ 0.16
CXCL12-204ENST00000395793 Q71RC1 249 aaPredicted RBP16.06■□□□□ 0.16
CXCL12-204ENST00000395793 ANKRD46Q86W74 232 aa16.06■□□□□ 0.16
CXCL12-204ENST00000395793 LSRQ86X29 649 aaPredicted RBP16.06■□□□□ 0.16
CXCL12-204ENST00000395793 LRRC75A-AS1Q8N1F1 130 aa16.06■□□□□ 0.16
CXCL12-204ENST00000395793 ATP6V1C2Q8NEY4 427 aa16.06■□□□□ 0.16
CXCL12-204ENST00000395793 OR5W2Q8NH69 310 aa16.06■□□□□ 0.16
CXCL12-204ENST00000395793 ZFP90Q8TF47 636 aa16.06■□□□□ 0.16
CXCL12-204ENST00000395793 IGFBPL1Q8WX77 278 aa16.06■□□□□ 0.16
CXCL12-204ENST00000395793 CPNE4Q96A23 557 aaPredicted RBP16.06■□□□□ 0.16
CXCL12-204ENST00000395793 C18orf12Q96KH6 178 aa16.06■□□□□ 0.16
CXCL12-204ENST00000395793 ZIM3Q96PE6 472 aa16.06■□□□□ 0.16
CXCL12-204ENST00000395793 CCL19Q99731 98 aa16.06■□□□□ 0.16
CXCL12-204ENST00000395793 ACTR6Q9GZN1 396 aa16.06■□□□□ 0.16
CXCL12-204ENST00000395793 NMUR2Q9GZQ4 415 aa16.06■□□□□ 0.16
CXCL12-204ENST00000395793 KLHL13Q9P2N7 655 aa16.06■□□□□ 0.16
CXCL12-204ENST00000395793 RAP2CQ9Y3L5 183 aa16.06■□□□□ 0.16
CXCL12-204ENST00000395793 NSD1Q96L73 2696 aaPredicted RBP16.06■□□□□ 0.16
CXCL12-204ENST00000395793 IGHV3-15A0A0B4J1V0 119 aa16.05■□□□□ 0.16
CXCL12-204ENST00000395793 A0A1W2PNR3 127 aa16.05■□□□□ 0.16
CXCL12-204ENST00000395793 SERINC4A6NH21 518 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms