RNA–Protein interactions for RNA: ENST00000394817.6

SIL1-202, Transcript of SIL1 nucleotide exchange factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIL1, Length 1,923 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIL1-202ENST00000394817 LDHAL6BQ9BYZ2 381 aaPredicted RBP17.19■□□□□ 0.34
SIL1-202ENST00000394817 CAPN10Q9HC96 672 aa17.19■□□□□ 0.34
SIL1-202ENST00000394817 ERVK13-1Q9NX77 482 aa17.19■□□□□ 0.34
SIL1-202ENST00000394817 DNAJB12Q9NXW2 375 aaKnown RBP17.19■□□□□ 0.34
SIL1-202ENST00000394817 H2AFY2Q9P0M6 372 aaPredicted RBP17.19■□□□□ 0.34
SIL1-202ENST00000394817 ZNF229Q9UJW7 825 aa17.19■□□□□ 0.34
SIL1-202ENST00000394817 YARS2Q9Y2Z4 477 aaKnown RBP17.19■□□□□ 0.34
SIL1-202ENST00000394817 CLDN16Q9Y5I7 305 aa17.19■□□□□ 0.34
SIL1-202ENST00000394817 EML5Q05BV3 1969 aa17.19■□□□□ 0.34
SIL1-202ENST00000394817 ABCA7Q8IZY2 2146 aa17.19■□□□□ 0.34
SIL1-202ENST00000394817 MN1Q10571 1320 aaPredicted RBP17.19■□□□□ 0.34
SIL1-202ENST00000394817 PCDH15Q96QU1 1955 aa17.19■□□□□ 0.34
SIL1-202ENST00000394817 J3QRE1 110 aa17.19■□□□□ 0.34
SIL1-202ENST00000394817 CDRT1O95170 752 aa17.19■□□□□ 0.34
SIL1-202ENST00000394817 FGF9P31371 208 aaPredicted RBP17.19■□□□□ 0.34
SIL1-202ENST00000394817 RFX3P48380 749 aa17.19■□□□□ 0.34
SIL1-202ENST00000394817 RUNX1T1Q06455 604 aa17.19■□□□□ 0.34
SIL1-202ENST00000394817 SRSF5Q13243 272 aaKnown RBP17.19■□□□□ 0.34
SIL1-202ENST00000394817 NIPAL3Q6P499 406 aa17.19■□□□□ 0.34
SIL1-202ENST00000394817 ZC3H14Q6PJT7 736 aaKnown RBP17.19■□□□□ 0.34
SIL1-202ENST00000394817 KLHL36Q8N4N3 616 aa17.19■□□□□ 0.34
SIL1-202ENST00000394817 ZNF614Q8N883 585 aa17.19■□□□□ 0.34
SIL1-202ENST00000394817 POC5Q8NA72 575 aa17.19■□□□□ 0.34
SIL1-202ENST00000394817 GALNT6Q8NCL4 622 aa17.19■□□□□ 0.34
SIL1-202ENST00000394817 RNF217Q8TC41 542 aa17.19■□□□□ 0.34
SIL1-202ENST00000394817 SLC35B4Q969S0 331 aa17.19■□□□□ 0.34
SIL1-202ENST00000394817 KCTD7Q96MP8 289 aa17.19■□□□□ 0.34
SIL1-202ENST00000394817 SDHCQ99643 169 aaPredicted RBP17.19■□□□□ 0.34
SIL1-202ENST00000394817 MEPEQ9NQ76 525 aaPredicted RBP17.19■□□□□ 0.34
SIL1-202ENST00000394817 PRTFDC1Q9NRG1 225 aa17.19■□□□□ 0.34
SIL1-202ENST00000394817 FLRT3Q9NZU0 649 aa17.19■□□□□ 0.34
SIL1-202ENST00000394817 SIGLEC7Q9Y286 467 aa17.19■□□□□ 0.34
SIL1-202ENST00000394817 TRAPPC4Q9Y296 219 aa17.19■□□□□ 0.34
SIL1-202ENST00000394817 HRKO00198 91 aa17.18■□□□□ 0.34
SIL1-202ENST00000394817 PRAMEF2O60811 474 aa17.18■□□□□ 0.34
SIL1-202ENST00000394817 MSL3P1P0C860 447 aa17.18■□□□□ 0.34
SIL1-202ENST00000394817 SEPHS1P49903 392 aa17.18■□□□□ 0.34
SIL1-202ENST00000394817 PSPHP78330 225 aa17.18■□□□□ 0.34
SIL1-202ENST00000394817 LSRQ86X29 649 aaPredicted RBP17.18■□□□□ 0.34
SIL1-202ENST00000394817 CADM3Q8N126 398 aa17.18■□□□□ 0.34
SIL1-202ENST00000394817 SIRT6Q8N6T7 355 aa17.18■□□□□ 0.34
SIL1-202ENST00000394817 OR4N2Q8NGD1 307 aa17.18■□□□□ 0.34
SIL1-202ENST00000394817 OR13C2Q8NGS9 318 aa17.18■□□□□ 0.34
SIL1-202ENST00000394817 LMX1AQ8TE12 382 aa17.18■□□□□ 0.34
SIL1-202ENST00000394817 ASB15Q8WXK1 588 aa17.18■□□□□ 0.34
SIL1-202ENST00000394817 DGAT2Q96PD7 388 aa17.18■□□□□ 0.34
SIL1-202ENST00000394817 SLC38A3Q99624 504 aa17.18■□□□□ 0.34
SIL1-202ENST00000394817 ENKD1Q9H0I2 346 aa17.18■□□□□ 0.34
SIL1-202ENST00000394817 TNFRSF10DQ9UBN6 386 aa17.18■□□□□ 0.34
SIL1-202ENST00000394817 DTX4Q9Y2E6 619 aa17.18■□□□□ 0.34
SIL1-202ENST00000394817 A0A1B0GWA3 101 aa17.17■□□□□ 0.34
SIL1-202ENST00000394817 SLC35F4A4IF30 521 aa17.17■□□□□ 0.34
SIL1-202ENST00000394817 FAM183AA6NL82 134 aa17.17■□□□□ 0.34
SIL1-202ENST00000394817 METTL12A8MUP2 240 aa17.17■□□□□ 0.34
SIL1-202ENST00000394817 NPIPB9F8W1W9 429 aa17.17■□□□□ 0.34
SIL1-202ENST00000394817 CLDN4O14493 209 aa17.17■□□□□ 0.34
SIL1-202ENST00000394817 ZNF749O43361 778 aa17.17■□□□□ 0.34
SIL1-202ENST00000394817 AKAP8O43823 692 aaKnown RBP17.17■□□□□ 0.34
SIL1-202ENST00000394817 ADAM11O75078 769 aa17.17■□□□□ 0.34
SIL1-202ENST00000394817 CDC123O75794 336 aaPredicted RBP17.17■□□□□ 0.34
SIL1-202ENST00000394817 LALBAP00709 142 aa17.17■□□□□ 0.34
SIL1-202ENST00000394817 MLLT3P42568 568 aaPredicted RBP17.17■□□□□ 0.34
SIL1-202ENST00000394817 RBM34P42696 430 aaKnown RBP17.17■□□□□ 0.34
SIL1-202ENST00000394817 ACAA2P42765 397 aaKnown RBP17.17■□□□□ 0.34
SIL1-202ENST00000394817 GPR3P46089 330 aa17.17■□□□□ 0.34
SIL1-202ENST00000394817 MAT1AQ00266 395 aaKnown RBP17.17■□□□□ 0.34
SIL1-202ENST00000394817 ZNF141Q15928 474 aa17.17■□□□□ 0.34
SIL1-202ENST00000394817 ZSWIM7Q19AV6 140 aa17.17■□□□□ 0.34
SIL1-202ENST00000394817 PLBD1Q6P4A8 553 aa17.17■□□□□ 0.34
SIL1-202ENST00000394817 SMARCD3Q6STE5 483 aa17.17■□□□□ 0.34
SIL1-202ENST00000394817 NPSR1Q6W5P4 371 aa17.17■□□□□ 0.34
SIL1-202ENST00000394817 THSD4Q6ZMP0 1018 aa17.17■□□□□ 0.34
SIL1-202ENST00000394817 C17orf82Q86X59 251 aaPredicted RBP17.17■□□□□ 0.34
SIL1-202ENST00000394817 SPEM1Q8N4L4 309 aa17.17■□□□□ 0.34
SIL1-202ENST00000394817 LSMEM1Q8N8F7 131 aa17.17■□□□□ 0.34
SIL1-202ENST00000394817 GRHL3Q8TE85 626 aa17.17■□□□□ 0.34
SIL1-202ENST00000394817 C1GALT1C1Q96EU7 318 aa17.17■□□□□ 0.34
SIL1-202ENST00000394817 ZNF578Q96N58 590 aaPredicted RBP17.17■□□□□ 0.34
SIL1-202ENST00000394817 SECISBP2Q96T21 854 aaKnown RBP17.17■□□□□ 0.34
SIL1-202ENST00000394817 TRIM2Q9C040 744 aa17.17■□□□□ 0.34
SIL1-202ENST00000394817 CMC2Q9NRP2 79 aa17.17■□□□□ 0.34
SIL1-202ENST00000394817 PLCL2Q9UPR0 1127 aa17.17■□□□□ 0.34
SIL1-202ENST00000394817 RGS5O15539 181 aa17.17■□□□□ 0.34
SIL1-202ENST00000394817 DCNP07585 359 aaKnown RBP17.17■□□□□ 0.34
SIL1-202ENST00000394817 SAGP10523 405 aaPredicted RBP17.17■□□□□ 0.34
SIL1-202ENST00000394817 SLC9A3P48764 834 aa17.17■□□□□ 0.34
SIL1-202ENST00000394817 FABP5Q01469 135 aa17.17■□□□□ 0.34
SIL1-202ENST00000394817 MXD1Q05195 221 aa17.17■□□□□ 0.34
SIL1-202ENST00000394817 FGFBP1Q14512 234 aa17.17■□□□□ 0.34
SIL1-202ENST00000394817 CRTC2Q53ET0 693 aaPredicted RBP17.17■□□□□ 0.34
SIL1-202ENST00000394817 ARMC4Q5T2S8 1044 aa17.17■□□□□ 0.34
SIL1-202ENST00000394817 LAX1Q8IWV1 398 aa17.17■□□□□ 0.34
SIL1-202ENST00000394817 ARSGQ96EG1 525 aa17.17■□□□□ 0.34
SIL1-202ENST00000394817 TM9SF2Q99805 663 aa17.17■□□□□ 0.34
SIL1-202ENST00000394817 COQ7Q99807 217 aa17.17■□□□□ 0.34
SIL1-202ENST00000394817 ST6GALNAC1Q9NSC7 600 aaPredicted RBP17.17■□□□□ 0.34
SIL1-202ENST00000394817 TOR4AQ9NXH8 423 aa17.17■□□□□ 0.34
SIL1-202ENST00000394817 GSTK1Q9Y2Q3 226 aa17.17■□□□□ 0.34
SIL1-202ENST00000394817 CAB39Q9Y376 341 aaPredicted RBP17.17■□□□□ 0.34
SIL1-202ENST00000394817 V9GYH0 126 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms