RNA–Protein interactions for RNA: ENST00000394536.4

PCDH1-203, Transcript of protocadherin 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDH1, Length 3,827 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1-203ENST00000394536 MN1Q10571 1320 aaPredicted RBP15.04■□□□□ -0
PCDH1-203ENST00000394536 GATBO75879 557 aaKnown RBP15.04■□□□□ -0
PCDH1-203ENST00000394536 EVI2BP34910 448 aa15.04■□□□□ -0
PCDH1-203ENST00000394536 GRK6P43250 576 aa15.04■□□□□ -0
PCDH1-203ENST00000394536 IRF4Q15306 451 aa15.04■□□□□ -0
PCDH1-203ENST00000394536 THAP4Q8WY91 577 aa15.04■□□□□ -0
PCDH1-203ENST00000394536 HERVK_113Q902F9 699 aa15.04■□□□□ -0
PCDH1-203ENST00000394536 RAB7BQ96AH8 199 aa15.04■□□□□ -0
PCDH1-203ENST00000394536 MRGPRX3Q96LB0 322 aa15.04■□□□□ -0
PCDH1-203ENST00000394536 PDCD10Q9BUL8 212 aa15.04■□□□□ -0
PCDH1-203ENST00000394536 GPR174Q9BXC1 333 aa15.04■□□□□ -0
PCDH1-203ENST00000394536 NXF2Q9GZY0 626 aaKnown RBP15.04■□□□□ -0
PCDH1-203ENST00000394536 ARRDC5A6NEK1 342 aa15.04■□□□□ -0
PCDH1-203ENST00000394536 TEX46H3BTG2 121 aa15.04■□□□□ -0
PCDH1-203ENST00000394536 MAN2B1O00754 1011 aa15.04■□□□□ -0
PCDH1-203ENST00000394536 ICMTO60725 284 aa15.04■□□□□ -0
PCDH1-203ENST00000394536 C21orf58P58505 322 aa15.04■□□□□ -0
PCDH1-203ENST00000394536 TAS2R43P59537 309 aa15.04■□□□□ -0
PCDH1-203ENST00000394536 AP3S2P59780 193 aa15.04■□□□□ -0
PCDH1-203ENST00000394536 TAF8Q7Z7C8 310 aa15.04■□□□□ -0
PCDH1-203ENST00000394536 CAMKVQ8NCB2 501 aa15.04■□□□□ -0
PCDH1-203ENST00000394536 OR8S1Q8NH09 359 aa15.04■□□□□ -0
PCDH1-203ENST00000394536 ABHD4Q8TB40 342 aa15.04■□□□□ -0
PCDH1-203ENST00000394536 ORAI1Q96D31 301 aa15.04■□□□□ -0
PCDH1-203ENST00000394536 MS4A4EQ96PG1 132 aa15.04■□□□□ -0
PCDH1-203ENST00000394536 TNFRSF13CQ96RJ3 184 aa15.04■□□□□ -0
PCDH1-203ENST00000394536 SLC17A9Q9BYT1 436 aa15.04■□□□□ -0
PCDH1-203ENST00000394536 GPN1Q9HCN4 374 aaPredicted RBP15.04■□□□□ -0
PCDH1-203ENST00000394536 PRELID1Q9Y255 219 aa15.04■□□□□ -0
PCDH1-203ENST00000394536 IER3IP1Q9Y5U9 82 aa15.04■□□□□ -0
PCDH1-203ENST00000394536 PCP4L1A6NKN8 68 aa15.04■□□□□ -0
PCDH1-203ENST00000394536 ZNF879B4DU55 563 aa15.04■□□□□ -0
PCDH1-203ENST00000394536 MSL3P1P0C860 447 aa15.04■□□□□ -0
PCDH1-203ENST00000394536 CLUP10909 449 aa15.04■□□□□ -0
PCDH1-203ENST00000394536 HTR1FP30939 366 aa15.04■□□□□ -0
PCDH1-203ENST00000394536 TRHRP34981 398 aaPredicted RBP15.04■□□□□ -0
PCDH1-203ENST00000394536 MAZP56270 477 aaKnown RBP15.04■□□□□ -0
PCDH1-203ENST00000394536 PSMA6P60900 246 aaKnown RBP15.04■□□□□ -0
PCDH1-203ENST00000394536 OC90Q02509 493 aaPredicted RBP15.04■□□□□ -0
PCDH1-203ENST00000394536 TRMT12Q53H54 448 aaKnown RBP15.04■□□□□ -0
PCDH1-203ENST00000394536 ARL14Q8N4G2 192 aa15.04■□□□□ -0
PCDH1-203ENST00000394536 FBXL6Q8N531 539 aa15.04■□□□□ -0
PCDH1-203ENST00000394536 TMIEQ8NEW7 156 aa15.04■□□□□ -0
PCDH1-203ENST00000394536 THEM6Q8WUY1 208 aa15.04■□□□□ -0
PCDH1-203ENST00000394536 NR4A3Q92570 626 aa15.04■□□□□ -0
PCDH1-203ENST00000394536 SLC22A18Q96BI1 424 aa15.04■□□□□ -0
PCDH1-203ENST00000394536 MS4A6EQ96DS6 147 aa15.04■□□□□ -0
PCDH1-203ENST00000394536 SLC35A4Q96G79 324 aa15.04■□□□□ -0
PCDH1-203ENST00000394536 DIABLOQ9NR28 239 aa15.04■□□□□ -0
PCDH1-203ENST00000394536 LYARQ9NX58 379 aaKnown RBP15.04■□□□□ -0
PCDH1-203ENST00000394536 MGAT4CQ9UBM8 478 aa15.04■□□□□ -0
PCDH1-203ENST00000394536 KDM4BO94953 1096 aa15.03■□□□□ -0
PCDH1-203ENST00000394536 FBXO45P0C2W1 286 aa15.03■□□□□ -0
PCDH1-203ENST00000394536 CFL1P23528 166 aaKnown RBP15.03■□□□□ -0
PCDH1-203ENST00000394536 AGERQ15109 404 aa15.03■□□□□ -0
PCDH1-203ENST00000394536 ZNF77Q15935 545 aa15.03■□□□□ -0
PCDH1-203ENST00000394536 AMZ1Q400G9 498 aa15.03■□□□□ -0
PCDH1-203ENST00000394536 KIF18BQ86Y91 864 aa15.03■□□□□ -0
PCDH1-203ENST00000394536 FAM109AQ8N4B1 249 aa15.03■□□□□ -0
PCDH1-203ENST00000394536 MS4A15Q8N5U1 240 aa15.03■□□□□ -0
PCDH1-203ENST00000394536 OR2L3Q8NG85 312 aa15.03■□□□□ -0
PCDH1-203ENST00000394536 OR4Q3Q8NH05 313 aa15.03■□□□□ -0
PCDH1-203ENST00000394536 COQ8AQ8NI60 647 aa15.03■□□□□ -0
PCDH1-203ENST00000394536 KXD1Q9BQD3 176 aa15.03■□□□□ -0
PCDH1-203ENST00000394536 ZNF559Q9BR84 538 aa15.03■□□□□ -0
PCDH1-203ENST00000394536 SLC7A5P2Q9GIP4 190 aa15.03■□□□□ -0
PCDH1-203ENST00000394536 C6orf106Q9H6K1 298 aaPredicted RBP15.03■□□□□ -0
PCDH1-203ENST00000394536 SCN4AP35499 1836 aa15.03■□□□□ -0
PCDH1-203ENST00000394536 SLC43A1O75387 559 aa15.03■□□□□ -0
PCDH1-203ENST00000394536 BCL2A1Q16548 175 aa15.03■□□□□ -0
PCDH1-203ENST00000394536 SLC48A1Q6P1K1 146 aa15.03■□□□□ -0
PCDH1-203ENST00000394536 LYPD8Q6UX82 237 aa15.03■□□□□ -0
PCDH1-203ENST00000394536 MBOAT2Q6ZWT7 520 aa15.03■□□□□ -0
PCDH1-203ENST00000394536 ABHD13Q7L211 337 aa15.03■□□□□ -0
PCDH1-203ENST00000394536 CHAC2Q8WUX2 184 aa15.03■□□□□ -0
PCDH1-203ENST00000394536 S100A16Q96FQ6 103 aaKnown RBP15.03■□□□□ -0
PCDH1-203ENST00000394536 SLC6A18Q96N87 628 aa15.03■□□□□ -0
PCDH1-203ENST00000394536 SIGLEC11Q96RL6 698 aa15.03■□□□□ -0
PCDH1-203ENST00000394536 GAL3ST4Q96RP7 486 aa15.03■□□□□ -0
PCDH1-203ENST00000394536 HRASLS2Q9NWW9 162 aa15.03■□□□□ -0
PCDH1-203ENST00000394536 KLHL21Q9UJP4 597 aa15.03■□□□□ -0
PCDH1-203ENST00000394536 SCN2AQ99250 2005 aa15.03■□□□□ -0
PCDH1-203ENST00000394536 LOC100509620A0A075B734 347 aa15.03■□□□□ -0
PCDH1-203ENST00000394536 CDHR4A6H8M9 788 aa15.03■□□□□ -0
PCDH1-203ENST00000394536 ACOD1A6NK06 481 aa15.03■□□□□ -0
PCDH1-203ENST00000394536 PEX12O00623 359 aa15.03■□□□□ -0
PCDH1-203ENST00000394536 RAD1O60671 282 aa15.03■□□□□ -0
PCDH1-203ENST00000394536 ZNF780AO75290 641 aaPredicted RBP15.03■□□□□ -0
PCDH1-203ENST00000394536 SOD1P00441 154 aa15.03■□□□□ -0
PCDH1-203ENST00000394536 GDI2P50395 445 aaKnown RBP15.03■□□□□ -0
PCDH1-203ENST00000394536 DUSP5Q16690 384 aa15.03■□□□□ -0
PCDH1-203ENST00000394536 TMEM31Q5JXX7 168 aa15.03■□□□□ -0
PCDH1-203ENST00000394536 HBMQ6B0K9 141 aa15.03■□□□□ -0
PCDH1-203ENST00000394536 SIAH3Q8IW03 269 aa15.03■□□□□ -0
PCDH1-203ENST00000394536 LRRC56Q8IYG6 542 aaPredicted RBP15.03■□□□□ -0
PCDH1-203ENST00000394536 OR2A1Q8NGT9 310 aa15.03■□□□□ -0
PCDH1-203ENST00000394536 CEP76Q8TAP6 659 aa15.03■□□□□ -0
PCDH1-203ENST00000394536 TAPBPLQ9BX59 468 aa15.03■□□□□ -0
PCDH1-203ENST00000394536 SLC38A1Q9H2H9 487 aa15.03■□□□□ -0
PCDH1-203ENST00000394536 KCND3Q9UK17 655 aa15.03■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms