RNA–Protein interactions for RNA: ENST00000393824.7

CUX1-204, Transcript of cut like homeobox 1, humanhuman

TSL 2 BASIC

Gene CUX1, Length 2,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-204ENST00000393824 CMIPQ8IY22 773 aa10.38□□□□□ -0.75
CUX1-204ENST00000393824 EIF4E3Q8N5X7 224 aaKnown RBP10.38□□□□□ -0.75
CUX1-204ENST00000393824 OR5T2Q8NGG2 359 aa10.38□□□□□ -0.75
CUX1-204ENST00000393824 NPAS1Q99742 590 aa10.38□□□□□ -0.75
CUX1-204ENST00000393824 FUZQ9BT04 418 aa10.38□□□□□ -0.75
CUX1-204ENST00000393824 GPR174Q9BXC1 333 aa10.38□□□□□ -0.75
CUX1-204ENST00000393824 CACNG6Q9BXT2 260 aa10.38□□□□□ -0.75
CUX1-204ENST00000393824 CDCP1Q9H5V8 836 aa10.38□□□□□ -0.75
CUX1-204ENST00000393824 BRD7Q9NPI1 651 aa10.38□□□□□ -0.75
CUX1-204ENST00000393824 PPIEQ9UNP9 301 aaKnown RBP10.38□□□□□ -0.75
CUX1-204ENST00000393824 TMEM5Q9Y2B1 443 aa10.38□□□□□ -0.75
CUX1-204ENST00000393824 K7ESF4 209 aa10.37□□□□□ -0.75
CUX1-204ENST00000393824 NUPL2O15504 423 aaKnown RBP10.37□□□□□ -0.75
CUX1-204ENST00000393824 EEF1E1O43324 174 aaKnown RBP10.37□□□□□ -0.75
CUX1-204ENST00000393824 SEMA7AO75326 666 aa10.37□□□□□ -0.75
CUX1-204ENST00000393824 SEMA4FO95754 770 aa10.37□□□□□ -0.75
CUX1-204ENST00000393824 HRGP04196 525 aa10.37□□□□□ -0.75
CUX1-204ENST00000393824 NPR2P20594 1047 aa10.37□□□□□ -0.75
CUX1-204ENST00000393824 MAOBP27338 520 aa10.37□□□□□ -0.75
CUX1-204ENST00000393824 ZP1P60852 638 aa10.37□□□□□ -0.75
CUX1-204ENST00000393824 CDK5Q00535 292 aa10.37□□□□□ -0.75
CUX1-204ENST00000393824 PDE7AQ13946 482 aa10.37□□□□□ -0.75
CUX1-204ENST00000393824 SF1Q15637 639 aaKnown RBP10.37□□□□□ -0.75
CUX1-204ENST00000393824 HBMQ6B0K9 141 aa10.37□□□□□ -0.75
CUX1-204ENST00000393824 PYHIN1Q6K0P9 492 aa10.37□□□□□ -0.75
CUX1-204ENST00000393824 RASSF6Q6ZTQ3 369 aa10.37□□□□□ -0.75
CUX1-204ENST00000393824 BTN2A1Q7KYR7 527 aa10.37□□□□□ -0.75
CUX1-204ENST00000393824 ZNF765Q7L2R6 523 aa10.37□□□□□ -0.75
CUX1-204ENST00000393824 KRT74Q7RTS7 529 aa10.37□□□□□ -0.75
CUX1-204ENST00000393824 HSD17B13Q7Z5P4 300 aaPredicted RBP10.37□□□□□ -0.75
CUX1-204ENST00000393824 IQCF1Q8N6M8 205 aa10.37□□□□□ -0.75
CUX1-204ENST00000393824 BVESQ8NE79 360 aa10.37□□□□□ -0.75
CUX1-204ENST00000393824 SKA2Q8WVK7 121 aaPredicted RBP10.37□□□□□ -0.75
CUX1-204ENST00000393824 RNFT2Q96EX2 444 aa10.37□□□□□ -0.75
CUX1-204ENST00000393824 COX14Q96I36 57 aa10.37□□□□□ -0.75
CUX1-204ENST00000393824 MTERF1Q99551 399 aaKnown RBP10.37□□□□□ -0.75
CUX1-204ENST00000393824 C12orf57Q99622 126 aa10.37□□□□□ -0.75
CUX1-204ENST00000393824 SGK2Q9HBY8 427 aa10.37□□□□□ -0.75
CUX1-204ENST00000393824 ZNF624Q9P2J8 865 aaPredicted RBP10.37□□□□□ -0.75
CUX1-204ENST00000393824 CUL9Q8IWT3 2517 aa10.37□□□□□ -0.75
CUX1-204ENST00000393824 IGHV1OR15-9A0A0B4J2B8 117 aa10.36□□□□□ -0.75
CUX1-204ENST00000393824 OR6C65A6NJZ3 312 aa10.36□□□□□ -0.75
CUX1-204ENST00000393824 H1F0P07305 194 aaKnown RBP10.36□□□□□ -0.75
CUX1-204ENST00000393824 H2AFB2P0C5Z0 115 aa10.36□□□□□ -0.75
CUX1-204ENST00000393824 OR12D1P0DN82 309 aa10.36□□□□□ -0.75
CUX1-204ENST00000393824 GIFP27352 417 aa10.36□□□□□ -0.75
CUX1-204ENST00000393824 PDHA2P29803 388 aa10.36□□□□□ -0.75
CUX1-204ENST00000393824 PBLDP30039 288 aaPredicted RBP10.36□□□□□ -0.75
CUX1-204ENST00000393824 MAPK9P45984 424 aa10.36□□□□□ -0.75
CUX1-204ENST00000393824 MTNR1AP48039 350 aa10.36□□□□□ -0.75
CUX1-204ENST00000393824 PREPP48147 710 aa10.36□□□□□ -0.75
CUX1-204ENST00000393824 MTNR1BP49286 362 aa10.36□□□□□ -0.75
CUX1-204ENST00000393824 SMIM11AP58511 58 aa10.36□□□□□ -0.75
CUX1-204ENST00000393824 GINS1Q14691 196 aa10.36□□□□□ -0.75
CUX1-204ENST00000393824 ETFDHQ16134 617 aa10.36□□□□□ -0.75
CUX1-204ENST00000393824 SLC5A12Q1EHB4 618 aa10.36□□□□□ -0.75
CUX1-204ENST00000393824 MPEG1Q2M385 716 aa10.36□□□□□ -0.75
CUX1-204ENST00000393824 MINDY4Q4G0A6 757 aa10.36□□□□□ -0.75
CUX1-204ENST00000393824 ZNF385BQ569K4 471 aa10.36□□□□□ -0.75
CUX1-204ENST00000393824 ACSM5Q6NUN0 579 aa10.36□□□□□ -0.75
CUX1-204ENST00000393824 FAM198BQ6UWH4 519 aa10.36□□□□□ -0.75
CUX1-204ENST00000393824 LYPD4Q6UWN0 246 aa10.36□□□□□ -0.75
CUX1-204ENST00000393824 IKBIPQ70UQ0 350 aa10.36□□□□□ -0.75
CUX1-204ENST00000393824 NLRC3Q7RTR2 1065 aa10.36□□□□□ -0.75
CUX1-204ENST00000393824 C11orf96Q7Z7L8 435 aa10.36□□□□□ -0.75
CUX1-204ENST00000393824 LRRC56Q8IYG6 542 aaPredicted RBP10.36□□□□□ -0.75
CUX1-204ENST00000393824 GPR135Q8IZ08 494 aa10.36□□□□□ -0.75
CUX1-204ENST00000393824 STPG2Q8N412 459 aa10.36□□□□□ -0.75
CUX1-204ENST00000393824 ZFP41Q8N8Y5 198 aa10.36□□□□□ -0.75
CUX1-204ENST00000393824 OR56B4Q8NH76 319 aa10.36□□□□□ -0.75
CUX1-204ENST00000393824 BMFQ96LC9 184 aa10.36□□□□□ -0.75
CUX1-204ENST00000393824 ABHD1Q96SE0 405 aa10.36□□□□□ -0.75
CUX1-204ENST00000393824 C7orf50Q9BRJ6 194 aaKnown RBP10.36□□□□□ -0.75
CUX1-204ENST00000393824 ORAI3Q9BRQ5 295 aa10.36□□□□□ -0.75
CUX1-204ENST00000393824 TMED9Q9BVK6 235 aa10.36□□□□□ -0.75
CUX1-204ENST00000393824 SARGQ9BW04 601 aa10.36□□□□□ -0.75
CUX1-204ENST00000393824 SAP130Q9H0E3 1048 aa10.36□□□□□ -0.75
CUX1-204ENST00000393824 ATG10Q9H0Y0 220 aa10.36□□□□□ -0.75
CUX1-204ENST00000393824 WSB2Q9NYS7 404 aaPredicted RBP10.36□□□□□ -0.75
CUX1-204ENST00000393824 SLC23A2Q9UGH3 650 aa10.36□□□□□ -0.75
CUX1-204ENST00000393824 CYB5R1Q9UHQ9 305 aa10.36□□□□□ -0.75
CUX1-204ENST00000393824 PFDN2Q9UHV9 154 aa10.36□□□□□ -0.75
CUX1-204ENST00000393824 ING1Q9UK53 422 aaPredicted RBP10.36□□□□□ -0.75
CUX1-204ENST00000393824 ACAD8Q9UKU7 415 aa10.36□□□□□ -0.75
CUX1-204ENST00000393824 CLCA2Q9UQC9 943 aa10.36□□□□□ -0.75
CUX1-204ENST00000393824 PLSCR5A0PG75 271 aa10.36□□□□□ -0.75
CUX1-204ENST00000393824 F8W036 122 aa10.36□□□□□ -0.75
CUX1-204ENST00000393824 AIPO00170 330 aa10.36□□□□□ -0.75
CUX1-204ENST00000393824 GMDSO60547 372 aa10.36□□□□□ -0.75
CUX1-204ENST00000393824 SLCO2B1O94956 709 aa10.36□□□□□ -0.75
CUX1-204ENST00000393824 C6orf47O95873 294 aa10.36□□□□□ -0.75
CUX1-204ENST00000393824 IGLV3-19P01714 112 aa10.36□□□□□ -0.75
CUX1-204ENST00000393824 SOX18P35713 384 aa10.36□□□□□ -0.75
CUX1-204ENST00000393824 HSD17B2P37059 387 aa10.36□□□□□ -0.75
CUX1-204ENST00000393824 SRP9P49458 86 aaKnown RBP10.36□□□□□ -0.75
CUX1-204ENST00000393824 SHC2P98077 582 aa10.36□□□□□ -0.75
CUX1-204ENST00000393824 ZNF763Q0D2J5 394 aa10.36□□□□□ -0.75
CUX1-204ENST00000393824 ZNF155Q12901 538 aaPredicted RBP10.36□□□□□ -0.75
CUX1-204ENST00000393824 SGCGQ13326 291 aa10.36□□□□□ -0.75
CUX1-204ENST00000393824 GRM7Q14831 915 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms