RNA–Protein interactions for RNA: ENST00000393077.2

VTI1A-201, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

APPRIS P1 TSL 2 BASIC

Gene VTI1A, Length 4,131 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-201ENST00000393077 HPXP02790 462 aa7.16□□□□□ -1.26
VTI1A-201ENST00000393077 SLC35G4P0C7Q5 338 aa7.16□□□□□ -1.26
VTI1A-201ENST00000393077 PIRTP0C851 137 aa7.16□□□□□ -1.26
VTI1A-201ENST00000393077 VAMP2P63027 116 aa7.16□□□□□ -1.26
VTI1A-201ENST00000393077 SKP1P63208 163 aa7.16□□□□□ -1.26
VTI1A-201ENST00000393077 DGCR2P98153 550 aa7.16□□□□□ -1.26
VTI1A-201ENST00000393077 ZNF616Q08AN1 781 aa7.16□□□□□ -1.26
VTI1A-201ENST00000393077 TEX19Q8NA77 164 aa7.16□□□□□ -1.26
VTI1A-201ENST00000393077 OR5T1Q8NG75 326 aa7.16□□□□□ -1.26
VTI1A-201ENST00000393077 OR56A3Q8NH54 315 aa7.16□□□□□ -1.26
VTI1A-201ENST00000393077 RSC1A1Q92681 617 aa7.16□□□□□ -1.26
VTI1A-201ENST00000393077 FBXO32Q969P5 355 aa7.16□□□□□ -1.26
VTI1A-201ENST00000393077 COL26A1Q96A83 441 aa7.16□□□□□ -1.26
VTI1A-201ENST00000393077 ISOC2Q96AB3 205 aa7.16□□□□□ -1.26
VTI1A-201ENST00000393077 MISP3Q96FF7 219 aa7.16□□□□□ -1.26
VTI1A-201ENST00000393077 TMEM169Q96HH4 297 aa7.16□□□□□ -1.26
VTI1A-201ENST00000393077 ZNF354BQ96LW1 612 aa7.16□□□□□ -1.26
VTI1A-201ENST00000393077 C5orf34Q96MH7 638 aa7.16□□□□□ -1.26
VTI1A-201ENST00000393077 NIPSNAP1Q9BPW8 284 aa7.16□□□□□ -1.26
VTI1A-201ENST00000393077 GABARAPL3Q9BY60 117 aa7.16□□□□□ -1.26
VTI1A-201ENST00000393077 RNF32Q9H0A6 362 aa7.16□□□□□ -1.26
VTI1A-201ENST00000393077 ZNF230Q9UIE0 474 aaPredicted RBP7.16□□□□□ -1.26
VTI1A-201ENST00000393077 GABRQQ9UN88 632 aa7.16□□□□□ -1.26
VTI1A-201ENST00000393077 TNKS1BP1Q9C0C2 1729 aaKnown RBP7.16□□□□□ -1.26
VTI1A-201ENST00000393077 TRDV1A0A1B0GX56 115 aa7.16□□□□□ -1.26
VTI1A-201ENST00000393077 TCRBV5S1A1TA0A578 114 aa7.16□□□□□ -1.26
VTI1A-201ENST00000393077 ACOD1A6NK06 481 aa7.16□□□□□ -1.26
VTI1A-201ENST00000393077 SELENOFO60613 162 aa7.16□□□□□ -1.26
VTI1A-201ENST00000393077 DFFBO76075 338 aa7.16□□□□□ -1.26
VTI1A-201ENST00000393077 HPP00738 406 aa7.16□□□□□ -1.26
VTI1A-201ENST00000393077 RPL29P47914 159 aaKnown RBP7.16□□□□□ -1.26
VTI1A-201ENST00000393077 TTPAP49638 278 aa7.16□□□□□ -1.26
VTI1A-201ENST00000393077 LILRA4P59901 499 aa7.16□□□□□ -1.26
VTI1A-201ENST00000393077 ADAM8P78325 824 aa7.16□□□□□ -1.26
VTI1A-201ENST00000393077 GABREP78334 506 aa7.16□□□□□ -1.26
VTI1A-201ENST00000393077 ENPP2Q13822 863 aa7.16□□□□□ -1.26
VTI1A-201ENST00000393077 OR4D1Q15615 310 aa7.16□□□□□ -1.26
VTI1A-201ENST00000393077 SLC25A52Q3SY17 297 aa7.16□□□□□ -1.26
VTI1A-201ENST00000393077 ZNF789Q5FWF6 425 aa7.16□□□□□ -1.26
VTI1A-201ENST00000393077 CLEC12AQ5QGZ9 265 aa7.16□□□□□ -1.26
VTI1A-201ENST00000393077 ZNF385CQ66K41 422 aaPredicted RBP7.16□□□□□ -1.26
VTI1A-201ENST00000393077 SLC36A4Q6YBV0 504 aa7.16□□□□□ -1.26
VTI1A-201ENST00000393077 KCTD9Q7L273 389 aa7.16□□□□□ -1.26
VTI1A-201ENST00000393077 IQCHQ86VS3 1027 aa7.16□□□□□ -1.26
VTI1A-201ENST00000393077 NKAIN4Q8IVV8 208 aa7.16□□□□□ -1.26
VTI1A-201ENST00000393077 MRPL41Q8IXM3 137 aaKnown RBP7.16□□□□□ -1.26
VTI1A-201ENST00000393077 EIF4E3Q8N5X7 224 aaKnown RBP7.16□□□□□ -1.26
VTI1A-201ENST00000393077 OR52B6Q8NGF0 335 aa7.16□□□□□ -1.26
VTI1A-201ENST00000393077 RHEBL1Q8TAI7 183 aa7.16□□□□□ -1.26
VTI1A-201ENST00000393077 RAB24Q969Q5 203 aa7.16□□□□□ -1.26
VTI1A-201ENST00000393077 CYP2S1Q96SQ9 504 aa7.16□□□□□ -1.26
VTI1A-201ENST00000393077 COLEC11Q9BWP8 271 aa7.16□□□□□ -1.26
VTI1A-201ENST00000393077 FAIM2Q9BWQ8 316 aa7.16□□□□□ -1.26
VTI1A-201ENST00000393077 RIMS4Q9H426 269 aaPredicted RBP7.16□□□□□ -1.26
VTI1A-201ENST00000393077 PPP1R3EQ9H7J1 279 aa7.16□□□□□ -1.26
VTI1A-201ENST00000393077 NLE1Q9NVX2 485 aaPredicted RBP7.16□□□□□ -1.26
VTI1A-201ENST00000393077 PARPBPQ9NWS1 579 aa7.16□□□□□ -1.26
VTI1A-201ENST00000393077 GULP1Q9UBP9 304 aa7.16□□□□□ -1.26
VTI1A-201ENST00000393077 ARAP2Q8WZ64 1704 aa7.16□□□□□ -1.26
VTI1A-201ENST00000393077 C20orf202A1L168 122 aa7.16□□□□□ -1.26
VTI1A-201ENST00000393077 GABRR3A8MPY1 467 aa7.16□□□□□ -1.26
VTI1A-201ENST00000393077 HMSDA8MTL9 139 aa7.16□□□□□ -1.26
VTI1A-201ENST00000393077 UBE2CO00762 179 aa7.16□□□□□ -1.26
VTI1A-201ENST00000393077 PCDH7O60245 1069 aa7.16□□□□□ -1.26
VTI1A-201ENST00000393077 SCGB1D1O95968 90 aa7.16□□□□□ -1.26
VTI1A-201ENST00000393077 GP1BAP07359 652 aa7.16□□□□□ -1.26
VTI1A-201ENST00000393077 OSMP13725 252 aa7.16□□□□□ -1.26
VTI1A-201ENST00000393077 ABOP16442 354 aa7.16□□□□□ -1.26
VTI1A-201ENST00000393077 MAOAP21397 527 aa7.16□□□□□ -1.26
VTI1A-201ENST00000393077 ADH6P28332 368 aa7.16□□□□□ -1.26
VTI1A-201ENST00000393077 HOXA9P31269 272 aa7.16□□□□□ -1.26
VTI1A-201ENST00000393077 CXCR3P49682 368 aa7.16□□□□□ -1.26
VTI1A-201ENST00000393077 CD81P60033 236 aa7.16□□□□□ -1.26
VTI1A-201ENST00000393077 SCARB2Q14108 478 aa7.16□□□□□ -1.26
VTI1A-201ENST00000393077 GAMTQ14353 236 aa7.16□□□□□ -1.26
VTI1A-201ENST00000393077 MICBQ29980 383 aa7.16□□□□□ -1.26
VTI1A-201ENST00000393077 FAM219BQ5XKK7 198 aa7.16□□□□□ -1.26
VTI1A-201ENST00000393077 GRHL2Q6ISB3 625 aa7.16□□□□□ -1.26
VTI1A-201ENST00000393077 ZNF585AQ6P3V2 769 aa7.16□□□□□ -1.26
VTI1A-201ENST00000393077 ENPP7Q6UWV6 458 aa7.16□□□□□ -1.26
VTI1A-201ENST00000393077 CBLL1Q75N03 491 aa7.16□□□□□ -1.26
VTI1A-201ENST00000393077 CILP2Q8IUL8 1156 aa7.16□□□□□ -1.26
VTI1A-201ENST00000393077 PNPLA1Q8N8W4 532 aa7.16□□□□□ -1.26
VTI1A-201ENST00000393077 DUSP19Q8WTR2 217 aa7.16□□□□□ -1.26
VTI1A-201ENST00000393077 CASTOR1Q8WTX7 329 aa7.16□□□□□ -1.26
VTI1A-201ENST00000393077 THOC3Q96J01 351 aaKnown RBP7.16□□□□□ -1.26
VTI1A-201ENST00000393077 ZNF382Q96SR6 550 aa7.16□□□□□ -1.26
VTI1A-201ENST00000393077 EBPLQ9BY08 206 aa7.16□□□□□ -1.26
VTI1A-201ENST00000393077 TM6SF2Q9BZW4 377 aa7.16□□□□□ -1.26
VTI1A-201ENST00000393077 UQCC1Q9NVA1 299 aa7.16□□□□□ -1.26
VTI1A-201ENST00000393077 C2orf42Q9NWW7 574 aa7.16□□□□□ -1.26
VTI1A-201ENST00000393077 FAM120CQ9NX05 1096 aaKnown RBP7.16□□□□□ -1.26
VTI1A-201ENST00000393077 SIX4Q9UIU6 781 aa7.16□□□□□ -1.26
VTI1A-201ENST00000393077 MAP4K5Q9Y4K4 846 aa7.16□□□□□ -1.26
VTI1A-201ENST00000393077 DNAJC25-GNG10A0A024R161 153 aa7.15□□□□□ -1.26
VTI1A-201ENST00000393077 TMEM235A6NFC5 223 aa7.15□□□□□ -1.26
VTI1A-201ENST00000393077 B4E171 279 aa7.15□□□□□ -1.26
VTI1A-201ENST00000393077 RNF13O43567 381 aa7.15□□□□□ -1.26
VTI1A-201ENST00000393077 CIDEAO60543 219 aa7.15□□□□□ -1.26
VTI1A-201ENST00000393077 OR2C1O95371 312 aa7.15□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms