RNA–Protein interactions for RNA: ENST00000392456.3

CCDC50-202, Transcript of coiled-coil domain containing 50, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CCDC50, Length 2,454 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-202ENST00000392456 CHP2O43745 196 aa17.67■□□□□ 0.42
CCDC50-202ENST00000392456 HCN1O60741 890 aa17.67■□□□□ 0.42
CCDC50-202ENST00000392456 CPSF4O95639 269 aaKnown RBP17.67■□□□□ 0.42
CCDC50-202ENST00000392456 CD63P08962 238 aa17.67■□□□□ 0.42
CCDC50-202ENST00000392456 MYF5P13349 255 aa17.67■□□□□ 0.42
CCDC50-202ENST00000392456 SSTR2P30874 369 aa17.67■□□□□ 0.42
CCDC50-202ENST00000392456 CHRNB3Q05901 458 aa17.67■□□□□ 0.42
CCDC50-202ENST00000392456 CHCHD2P9Q5T1J5 151 aaPredicted RBP17.67■□□□□ 0.42
CCDC50-202ENST00000392456 FRMPD2BQ6IN97 320 aa17.67■□□□□ 0.42
CCDC50-202ENST00000392456 FIGLAQ6QHK4 219 aa17.67■□□□□ 0.42
CCDC50-202ENST00000392456 ZNF551Q7Z340 670 aaPredicted RBP17.67■□□□□ 0.42
CCDC50-202ENST00000392456 LUZP2Q86TE4 346 aa17.67■□□□□ 0.42
CCDC50-202ENST00000392456 GKN2Q86XP6 184 aa17.67■□□□□ 0.42
CCDC50-202ENST00000392456 OR4N4Q8N0Y3 316 aa17.67■□□□□ 0.42
CCDC50-202ENST00000392456 MFSD9Q8NBP5 474 aa17.67■□□□□ 0.42
CCDC50-202ENST00000392456 RGMAQ96B86 450 aa17.67■□□□□ 0.42
CCDC50-202ENST00000392456 ZNF583Q96ND8 569 aa17.67■□□□□ 0.42
CCDC50-202ENST00000392456 TREX2Q9BQ50 279 aaPredicted RBP17.67■□□□□ 0.42
CCDC50-202ENST00000392456 THUMPD3Q9BV44 507 aaKnown RBP17.67■□□□□ 0.42
CCDC50-202ENST00000392456 REEP4Q9H6H4 257 aa17.67■□□□□ 0.42
CCDC50-202ENST00000392456 RBFOX1Q9NWB1 397 aaKnown RBP17.67■□□□□ 0.42
CCDC50-202ENST00000392456 TEX10Q9NXF1 929 aaPredicted RBP17.67■□□□□ 0.42
CCDC50-202ENST00000392456 NDRG4Q9ULP0 352 aaKnown RBP17.67■□□□□ 0.42
CCDC50-202ENST00000392456 LMO7DNF2Z398 122 aa17.66■□□□□ 0.42
CCDC50-202ENST00000392456 LAMTOR5O43504 91 aa17.66■□□□□ 0.42
CCDC50-202ENST00000392456 TNFSF14O43557 240 aa17.66■□□□□ 0.42
CCDC50-202ENST00000392456 S100A9P06702 114 aaKnown RBP17.66■□□□□ 0.42
CCDC50-202ENST00000392456 ADRB1P08588 477 aa17.66■□□□□ 0.42
CCDC50-202ENST00000392456 CD53P19397 219 aa17.66■□□□□ 0.42
CCDC50-202ENST00000392456 PRKACGP22612 351 aa17.66■□□□□ 0.42
CCDC50-202ENST00000392456 PSMD4P55036 377 aaKnown RBP17.66■□□□□ 0.42
CCDC50-202ENST00000392456 TEAD4Q15561 434 aa17.66■□□□□ 0.42
CCDC50-202ENST00000392456 NHLRC3Q5JS37 347 aa17.66■□□□□ 0.42
CCDC50-202ENST00000392456 LRIF1Q5T3J3 769 aa17.66■□□□□ 0.42
CCDC50-202ENST00000392456 BHLHB9Q6PI77 547 aa17.66■□□□□ 0.42
CCDC50-202ENST00000392456 USP53Q70EK8 1073 aa17.66■□□□□ 0.42
CCDC50-202ENST00000392456 C1orf210Q8IVY1 113 aa17.66■□□□□ 0.42
CCDC50-202ENST00000392456 SHISA5Q8N114 240 aa17.66■□□□□ 0.42
CCDC50-202ENST00000392456 SLC25A45Q8N413 288 aa17.66■□□□□ 0.42
CCDC50-202ENST00000392456 TMEM105Q8N8V8 129 aa17.66■□□□□ 0.42
CCDC50-202ENST00000392456 BVESQ8NE79 360 aa17.66■□□□□ 0.42
CCDC50-202ENST00000392456 OR2T4Q8NH00 348 aa17.66■□□□□ 0.42
CCDC50-202ENST00000392456 OR10A6Q8NH74 314 aa17.66■□□□□ 0.42
CCDC50-202ENST00000392456 SVIPQ8NHG7 77 aa17.66■□□□□ 0.42
CCDC50-202ENST00000392456 CXorf58Q96LI9 332 aa17.66■□□□□ 0.42
CCDC50-202ENST00000392456 OR2A5Q96R48 311 aa17.66■□□□□ 0.42
CCDC50-202ENST00000392456 WNT5BQ9H1J7 359 aa17.66■□□□□ 0.42
CCDC50-202ENST00000392456 EMC7Q9NPA0 242 aa17.66■□□□□ 0.42
CCDC50-202ENST00000392456 MYNNQ9NPC7 610 aa17.66■□□□□ 0.42
CCDC50-202ENST00000392456 LAMP5Q9UJQ1 280 aa17.66■□□□□ 0.42
CCDC50-202ENST00000392456 KLK4Q9Y5K2 254 aa17.66■□□□□ 0.42
CCDC50-202ENST00000392456 CCDC163A0A0D9SF12 145 aa17.66■□□□□ 0.42
CCDC50-202ENST00000392456 A0A1B0GV90 55 aa17.66■□□□□ 0.42
CCDC50-202ENST00000392456 P2RX6O15547 441 aa17.66■□□□□ 0.42
CCDC50-202ENST00000392456 ERI3O43414 337 aaKnown RBP17.66■□□□□ 0.42
CCDC50-202ENST00000392456 ORC5O43913 435 aa17.66■□□□□ 0.42
CCDC50-202ENST00000392456 LALBAP00709 142 aa17.66■□□□□ 0.42
CCDC50-202ENST00000392456 S100A8P05109 93 aa17.66■□□□□ 0.42
CCDC50-202ENST00000392456 CKMT1AP12532 417 aa17.66■□□□□ 0.42
CCDC50-202ENST00000392456 AHRP35869 848 aa17.66■□□□□ 0.42
CCDC50-202ENST00000392456 KEAP1Q14145 624 aa17.66■□□□□ 0.42
CCDC50-202ENST00000392456 PUM1Q14671 1186 aaKnown RBP eCLIP17.66■□□□□ 0.42
CCDC50-202ENST00000392456 FCN2Q15485 313 aa17.66■□□□□ 0.42
CCDC50-202ENST00000392456 OR4C11Q6IEV9 310 aa17.66■□□□□ 0.42
CCDC50-202ENST00000392456 EXOSC8Q96B26 276 aaKnown RBP17.66■□□□□ 0.42
CCDC50-202ENST00000392456 RBM18Q96H35 190 aaKnown RBP17.66■□□□□ 0.42
CCDC50-202ENST00000392456 PANX1Q96RD7 426 aa17.66■□□□□ 0.42
CCDC50-202ENST00000392456 SLC22A11Q9NSA0 550 aa17.66■□□□□ 0.42
CCDC50-202ENST00000392456 AHSPQ9NZD4 102 aa17.66■□□□□ 0.42
CCDC50-202ENST00000392456 GPR179Q6PRD1 2367 aa17.66■□□□□ 0.42
CCDC50-202ENST00000392456 A0A096LPI6 279 aa17.65■□□□□ 0.42
CCDC50-202ENST00000392456 PRKRAO75569 313 aaKnown RBP17.65■□□□□ 0.42
CCDC50-202ENST00000392456 CST1P01037 141 aa17.65■□□□□ 0.42
CCDC50-202ENST00000392456 CTSBP07858 339 aa17.65■□□□□ 0.42
CCDC50-202ENST00000392456 ATP12AP54707 1039 aa17.65■□□□□ 0.42
CCDC50-202ENST00000392456 MAD2L1BPQ15013 274 aaPredicted RBP17.65■□□□□ 0.42
CCDC50-202ENST00000392456 LCN1P1Q5VSP4 162 aa17.65■□□□□ 0.42
CCDC50-202ENST00000392456 LYSMD4Q5XG99 296 aa17.65■□□□□ 0.42
CCDC50-202ENST00000392456 FAM131AQ6UXB0 335 aa17.65■□□□□ 0.42
CCDC50-202ENST00000392456 RBCK1Q9BYM8 510 aa17.65■□□□□ 0.42
CCDC50-202ENST00000392456 ZNF436Q9C0F3 470 aaPredicted RBP17.65■□□□□ 0.42
CCDC50-202ENST00000392456 PRDM7Q9NQW5 492 aa17.65■□□□□ 0.42
CCDC50-202ENST00000392456 IMPAD1Q9NX62 359 aa17.65■□□□□ 0.42
CCDC50-202ENST00000392456 THUMPD1Q9NXG2 353 aaKnown RBP17.65■□□□□ 0.42
CCDC50-202ENST00000392456 PILRAQ9UKJ1 303 aa17.65■□□□□ 0.42
CCDC50-202ENST00000392456 ORC6Q9Y5N6 252 aa17.65■□□□□ 0.42
CCDC50-202ENST00000392456 GPR37O15354 613 aa17.65■□□□□ 0.42
CCDC50-202ENST00000392456 ANXA6P08133 673 aa17.65■□□□□ 0.42
CCDC50-202ENST00000392456 EIF2S3P41091 472 aaKnown RBP17.65■□□□□ 0.42
CCDC50-202ENST00000392456 FASLGP48023 281 aa17.65■□□□□ 0.42
CCDC50-202ENST00000392456 PGDP52209 483 aa17.65■□□□□ 0.42
CCDC50-202ENST00000392456 PDE7AQ13946 482 aa17.65■□□□□ 0.42
CCDC50-202ENST00000392456 SHBQ15464 509 aa17.65■□□□□ 0.42
CCDC50-202ENST00000392456 DUOXA1Q1HG43 343 aa17.65■□□□□ 0.42
CCDC50-202ENST00000392456 EIF2S3LQ2VIR3 472 aaKnown RBP17.65■□□□□ 0.42
CCDC50-202ENST00000392456 TEX30Q5JUR7 227 aa17.65■□□□□ 0.42
CCDC50-202ENST00000392456 ABHD17CQ6PCB6 329 aa17.65■□□□□ 0.42
CCDC50-202ENST00000392456 ZNF621Q6ZSS3 439 aa17.65■□□□□ 0.42
CCDC50-202ENST00000392456 CAMKMTQ7Z624 323 aa17.65■□□□□ 0.42
CCDC50-202ENST00000392456 TMEM179BQ7Z7N9 219 aa17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms