RNA–Protein interactions for RNA: ENST00000392128.6

SMARCAL1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene SMARCAL1, Length 2,431 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-203ENST00000392128 EMP2P54851 167 aa10.53□□□□□ -0.72
SMARCAL1-203ENST00000392128 FOXL2P58012 376 aa10.53□□□□□ -0.72
SMARCAL1-203ENST00000392128 MVKQ03426 396 aa10.53□□□□□ -0.72
SMARCAL1-203ENST00000392128 PRKCDQ05655 676 aa10.53□□□□□ -0.72
SMARCAL1-203ENST00000392128 SLC25A30Q5SVS4 291 aa10.53□□□□□ -0.72
SMARCAL1-203ENST00000392128 SLC27A4Q6P1M0 643 aa10.53□□□□□ -0.72
SMARCAL1-203ENST00000392128 ALDH16A1Q8IZ83 802 aa10.53□□□□□ -0.72
SMARCAL1-203ENST00000392128 SLC34A3Q8N130 599 aa10.53□□□□□ -0.72
SMARCAL1-203ENST00000392128 NFAM1Q8NET5 270 aaPredicted RBP10.53□□□□□ -0.72
SMARCAL1-203ENST00000392128 B3GNT7Q8NFL0 401 aa10.53□□□□□ -0.72
SMARCAL1-203ENST00000392128 ZNF420Q8TAQ5 688 aaPredicted RBP10.53□□□□□ -0.72
SMARCAL1-203ENST00000392128 GGHQ92820 318 aa10.53□□□□□ -0.72
SMARCAL1-203ENST00000392128 OSTF1Q92882 214 aa10.53□□□□□ -0.72
SMARCAL1-203ENST00000392128 MYDGFQ969H8 173 aa10.53□□□□□ -0.72
SMARCAL1-203ENST00000392128 MPP4Q96JB8 637 aa10.53□□□□□ -0.72
SMARCAL1-203ENST00000392128 Q96MT0 163 aa10.53□□□□□ -0.72
SMARCAL1-203ENST00000392128 COPS4Q9BT78 406 aa10.53□□□□□ -0.72
SMARCAL1-203ENST00000392128 DSN1Q9H410 356 aa10.53□□□□□ -0.72
SMARCAL1-203ENST00000392128 EGLN3Q9H6Z9 239 aa10.53□□□□□ -0.72
SMARCAL1-203ENST00000392128 WDR54Q9H977 334 aa10.53□□□□□ -0.72
SMARCAL1-203ENST00000392128 EXOSC3Q9NQT5 275 aaKnown RBP10.53□□□□□ -0.72
SMARCAL1-203ENST00000392128 IL20Q9NYY1 176 aa10.53□□□□□ -0.72
SMARCAL1-203ENST00000392128 TMEM5Q9Y2B1 443 aa10.53□□□□□ -0.72
SMARCAL1-203ENST00000392128 HEATR5AQ86XA9 2040 aa10.52□□□□□ -0.72
SMARCAL1-203ENST00000392128 TSPAN2O60636 221 aa10.52□□□□□ -0.73
SMARCAL1-203ENST00000392128 HPGDP15428 266 aa10.52□□□□□ -0.73
SMARCAL1-203ENST00000392128 DCKP27707 260 aa10.52□□□□□ -0.73
SMARCAL1-203ENST00000392128 GSTT1P30711 240 aa10.52□□□□□ -0.73
SMARCAL1-203ENST00000392128 NR0B1P51843 470 aaKnown RBP10.52□□□□□ -0.73
SMARCAL1-203ENST00000392128 CTBP2P56545 445 aa10.52□□□□□ -0.73
SMARCAL1-203ENST00000392128 LCN10Q6JVE6 187 aa10.52□□□□□ -0.73
SMARCAL1-203ENST00000392128 ULK3Q6PHR2 472 aa10.52□□□□□ -0.73
SMARCAL1-203ENST00000392128 ZNF620Q6ZNG0 422 aa10.52□□□□□ -0.73
SMARCAL1-203ENST00000392128 SLCO6A1Q86UG4 719 aa10.52□□□□□ -0.73
SMARCAL1-203ENST00000392128 CLVS1Q8IUQ0 354 aaPredicted RBP10.52□□□□□ -0.73
SMARCAL1-203ENST00000392128 IQCF1Q8N6M8 205 aa10.52□□□□□ -0.73
SMARCAL1-203ENST00000392128 OR8D4Q8NGM9 314 aa10.52□□□□□ -0.73
SMARCAL1-203ENST00000392128 FAR1Q8WVX9 515 aa10.52□□□□□ -0.73
SMARCAL1-203ENST00000392128 LHPPQ9H008 270 aa10.52□□□□□ -0.73
SMARCAL1-203ENST00000392128 MED31Q9Y3C7 131 aa10.52□□□□□ -0.73
SMARCAL1-203ENST00000392128 COMMD3-BMI1R4GMX3 469 aa10.52□□□□□ -0.73
SMARCAL1-203ENST00000392128 IGHV3-20A0A0C4DH32 117 aa10.52□□□□□ -0.73
SMARCAL1-203ENST00000392128 B4E171 279 aa10.52□□□□□ -0.73
SMARCAL1-203ENST00000392128 GDF9O60383 454 aa10.52□□□□□ -0.73
SMARCAL1-203ENST00000392128 CDK1P06493 297 aa10.52□□□□□ -0.73
SMARCAL1-203ENST00000392128 NGFRP08138 427 aa10.52□□□□□ -0.73
SMARCAL1-203ENST00000392128 CCL4P13236 92 aa10.52□□□□□ -0.73
SMARCAL1-203ENST00000392128 IL12BP29460 328 aa10.52□□□□□ -0.73
SMARCAL1-203ENST00000392128 SLC5A2P31639 672 aa10.52□□□□□ -0.73
SMARCAL1-203ENST00000392128 TSPAN7P41732 249 aa10.52□□□□□ -0.73
SMARCAL1-203ENST00000392128 PCYT1AP49585 367 aa10.52□□□□□ -0.73
SMARCAL1-203ENST00000392128 NUDT6P53370 316 aa10.52□□□□□ -0.73
SMARCAL1-203ENST00000392128 EFNB1P98172 346 aa10.52□□□□□ -0.73
SMARCAL1-203ENST00000392128 OCLNQ16625 522 aa10.52□□□□□ -0.73
SMARCAL1-203ENST00000392128 ALG10BQ5I7T1 473 aa10.52□□□□□ -0.73
SMARCAL1-203ENST00000392128 ACSM5Q6NUN0 579 aa10.52□□□□□ -0.73
SMARCAL1-203ENST00000392128 TMEM205Q6UW68 189 aa10.52□□□□□ -0.73
SMARCAL1-203ENST00000392128 LINC00114Q6XXX2 140 aa10.52□□□□□ -0.73
SMARCAL1-203ENST00000392128 FAM26EQ8N5C1 309 aa10.52□□□□□ -0.73
SMARCAL1-203ENST00000392128 APCDD1LQ8NCL9 501 aa10.52□□□□□ -0.73
SMARCAL1-203ENST00000392128 GRHL3Q8TE85 626 aa10.52□□□□□ -0.73
SMARCAL1-203ENST00000392128 TP53INP1Q96A56 240 aa10.52□□□□□ -0.73
SMARCAL1-203ENST00000392128 NMD3Q96D46 503 aaKnown RBP10.52□□□□□ -0.73
SMARCAL1-203ENST00000392128 IL4I1Q96RQ9 567 aa10.52□□□□□ -0.73
SMARCAL1-203ENST00000392128 ADOQ96SZ5 270 aa10.52□□□□□ -0.73
SMARCAL1-203ENST00000392128 TSC22D3Q99576 134 aa10.52□□□□□ -0.73
SMARCAL1-203ENST00000392128 NRSN2Q9GZP1 204 aa10.52□□□□□ -0.73
SMARCAL1-203ENST00000392128 TVP23BQ9NYZ1 205 aa10.52□□□□□ -0.73
SMARCAL1-203ENST00000392128 CNOT2Q9NZN8 540 aaKnown RBP10.52□□□□□ -0.73
SMARCAL1-203ENST00000392128 NXT1Q9UKK6 140 aaKnown RBP10.52□□□□□ -0.73
SMARCAL1-203ENST00000392128 CDH10Q9Y6N8 788 aa10.52□□□□□ -0.73
SMARCAL1-203ENST00000392128 EFCAB10A6NFE3 127 aa10.51□□□□□ -0.73
SMARCAL1-203ENST00000392128 ZNF99A8MXY4 864 aaPredicted RBP10.51□□□□□ -0.73
SMARCAL1-203ENST00000392128 CDC42EP2O14613 210 aa10.51□□□□□ -0.73
SMARCAL1-203ENST00000392128 CDX4O14627 284 aaPredicted RBP10.51□□□□□ -0.73
SMARCAL1-203ENST00000392128 REM1O75628 298 aa10.51□□□□□ -0.73
SMARCAL1-203ENST00000392128 UBL4AP11441 157 aa10.51□□□□□ -0.73
SMARCAL1-203ENST00000392128 CD59P13987 128 aa10.51□□□□□ -0.73
SMARCAL1-203ENST00000392128 ZNF28P17035 718 aa10.51□□□□□ -0.73
SMARCAL1-203ENST00000392128 MASP1P48740 699 aa10.51□□□□□ -0.73
SMARCAL1-203ENST00000392128 PNLIPRP2P54317 469 aa10.51□□□□□ -0.73
SMARCAL1-203ENST00000392128 RNF4P78317 190 aa10.51□□□□□ -0.73
SMARCAL1-203ENST00000392128 PLCXD2Q0VAA5 305 aa10.51□□□□□ -0.73
SMARCAL1-203ENST00000392128 SKP2Q13309 424 aa10.51□□□□□ -0.73
SMARCAL1-203ENST00000392128 CD226Q15762 336 aa10.51□□□□□ -0.73
SMARCAL1-203ENST00000392128 NDUFAF6Q330K2 333 aa10.51□□□□□ -0.73
SMARCAL1-203ENST00000392128 KIRREL2Q6UWL6 708 aa10.51□□□□□ -0.73
SMARCAL1-203ENST00000392128 B3GNT6Q6ZMB0 384 aa10.51□□□□□ -0.73
SMARCAL1-203ENST00000392128 TMPRSS11FQ6ZWK6 438 aa10.51□□□□□ -0.73
SMARCAL1-203ENST00000392128 CPEB2Q7Z5Q1 589 aaKnown RBP10.51□□□□□ -0.73
SMARCAL1-203ENST00000392128 PRR22Q8IZ63 422 aa10.51□□□□□ -0.73
SMARCAL1-203ENST00000392128 TCEANCQ8N8B7 351 aa10.51□□□□□ -0.73
SMARCAL1-203ENST00000392128 PFN4Q8NHR9 129 aa10.51□□□□□ -0.73
SMARCAL1-203ENST00000392128 DNAJA4Q8WW22 397 aaPredicted RBP10.51□□□□□ -0.73
SMARCAL1-203ENST00000392128 FGF11Q92914 225 aa10.51□□□□□ -0.73
SMARCAL1-203ENST00000392128 ISOC1Q96CN7 298 aa10.51□□□□□ -0.73
SMARCAL1-203ENST00000392128 OMA1Q96E52 524 aa10.51□□□□□ -0.73
SMARCAL1-203ENST00000392128 ARSGQ96EG1 525 aa10.51□□□□□ -0.73
SMARCAL1-203ENST00000392128 DOK1Q99704 481 aa10.51□□□□□ -0.73
SMARCAL1-203ENST00000392128 WDR77Q9BQA1 342 aaPredicted RBP10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms