RNA–Protein interactions for RNA: ENST00000390847.1

SNORA40.2-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 128 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.2-201ENST00000390847 HTR2AP28223 471 aa3.07□□□□□ -1.92
SNORA40.2-201ENST00000390847 MDH1P40925 334 aaKnown RBP3.07□□□□□ -1.92
SNORA40.2-201ENST00000390847 KIR2DS2P43631 304 aa3.07□□□□□ -1.92
SNORA40.2-201ENST00000390847 EWSR1Q01844 656 aaKnown RBP eCLIP3.07□□□□□ -1.92
SNORA40.2-201ENST00000390847 RAB40BQ12829 278 aa3.07□□□□□ -1.92
SNORA40.2-201ENST00000390847 CUL1Q13616 776 aa3.07□□□□□ -1.92
SNORA40.2-201ENST00000390847 TPD52L1Q16890 204 aaPredicted RBP3.07□□□□□ -1.92
SNORA40.2-201ENST00000390847 C2orf83Q53S99 150 aa3.07□□□□□ -1.92
SNORA40.2-201ENST00000390847 LIPNQ5VXI9 398 aa3.07□□□□□ -1.92
SNORA40.2-201ENST00000390847 ERI1Q8IV48 349 aaKnown RBP3.07□□□□□ -1.92
SNORA40.2-201ENST00000390847 SKA3Q8IX90 412 aa3.07□□□□□ -1.92
SNORA40.2-201ENST00000390847 FADS6Q8N9I5 356 aa3.07□□□□□ -1.92
SNORA40.2-201ENST00000390847 DENND6BQ8NEG7 585 aa3.07□□□□□ -1.92
SNORA40.2-201ENST00000390847 OR9A1PQ8NGU1 263 aa3.07□□□□□ -1.92
SNORA40.2-201ENST00000390847 OR10T2Q8NGX3 314 aa3.07□□□□□ -1.92
SNORA40.2-201ENST00000390847 FRAT1Q92837 279 aaPredicted RBP3.07□□□□□ -1.92
SNORA40.2-201ENST00000390847 C4orf36Q96KX1 117 aa3.07□□□□□ -1.92
SNORA40.2-201ENST00000390847 IMMP1LQ96LU5 166 aa3.07□□□□□ -1.92
SNORA40.2-201ENST00000390847 CHIAQ9BZP6 476 aa3.07□□□□□ -1.92
SNORA40.2-201ENST00000390847 MARCH5Q9NX47 278 aa3.07□□□□□ -1.92
SNORA40.2-201ENST00000390847 ZNF221Q9UK13 617 aa3.07□□□□□ -1.92
SNORA40.2-201ENST00000390847 GSTK1Q9Y2Q3 226 aa3.07□□□□□ -1.92
SNORA40.2-201ENST00000390847 ALG6Q9Y672 507 aa3.07□□□□□ -1.92
SNORA40.2-201ENST00000390847 SF3B1O75533 1304 aaKnown RBP eCLIP3.06□□□□□ -1.92
SNORA40.2-201ENST00000390847 MMP23AO75900 390 aa3.06□□□□□ -1.92
SNORA40.2-201ENST00000390847 KRT6BP04259 564 aa3.06□□□□□ -1.92
SNORA40.2-201ENST00000390847 ASNSP08243 561 aa3.06□□□□□ -1.92
SNORA40.2-201ENST00000390847 EPB41P11171 864 aaKnown RBP3.06□□□□□ -1.92
SNORA40.2-201ENST00000390847 GCFC2P16383 781 aaKnown RBP3.06□□□□□ -1.92
SNORA40.2-201ENST00000390847 ELK1P19419 428 aa3.06□□□□□ -1.92
SNORA40.2-201ENST00000390847 GABRR1P24046 479 aa3.06□□□□□ -1.92
SNORA40.2-201ENST00000390847 HOXD10P28358 340 aa3.06□□□□□ -1.92
SNORA40.2-201ENST00000390847 RBMXP38159 391 aaKnown RBP3.06□□□□□ -1.92
SNORA40.2-201ENST00000390847 KRT6CP48668 564 aa3.06□□□□□ -1.92
SNORA40.2-201ENST00000390847 PLA2G16P53816 162 aa3.06□□□□□ -1.92
SNORA40.2-201ENST00000390847 ORC2Q13416 577 aaPredicted RBP3.06□□□□□ -1.92
SNORA40.2-201ENST00000390847 SLC5A12Q1EHB4 618 aa3.06□□□□□ -1.92
SNORA40.2-201ENST00000390847 TIGITQ495A1 244 aa3.06□□□□□ -1.92
SNORA40.2-201ENST00000390847 CFAP221Q4G0U5 840 aa3.06□□□□□ -1.92
SNORA40.2-201ENST00000390847 EOGTQ5NDL2 527 aa3.06□□□□□ -1.92
SNORA40.2-201ENST00000390847 LCE3EQ5T5B0 92 aa3.06□□□□□ -1.92
SNORA40.2-201ENST00000390847 ATF7IP2Q5U623 682 aa3.06□□□□□ -1.92
SNORA40.2-201ENST00000390847 C16orf62Q7Z3J2 963 aa3.06□□□□□ -1.92
SNORA40.2-201ENST00000390847 LCA5Q86VQ0 697 aa3.06□□□□□ -1.92
SNORA40.2-201ENST00000390847 KRTAP11-1Q8IUC1 163 aa3.06□□□□□ -1.92
SNORA40.2-201ENST00000390847 NRMQ8IXM6 262 aa3.06□□□□□ -1.92
SNORA40.2-201ENST00000390847 OR51G2Q8NGK0 314 aa3.06□□□□□ -1.92
SNORA40.2-201ENST00000390847 PNPT1Q8TCS8 783 aaKnown RBP3.06□□□□□ -1.92
SNORA40.2-201ENST00000390847 SLC5A11Q8WWX8 675 aa3.06□□□□□ -1.92
SNORA40.2-201ENST00000390847 CELF6Q96J87 481 aaKnown RBP3.06□□□□□ -1.92
SNORA40.2-201ENST00000390847 MCHR1Q99705 422 aa3.06□□□□□ -1.92
SNORA40.2-201ENST00000390847 CITED1Q99966 193 aa3.06□□□□□ -1.92
SNORA40.2-201ENST00000390847 FARSBQ9NSD9 589 aaKnown RBP3.06□□□□□ -1.92
SNORA40.2-201ENST00000390847 CD274Q9NZQ7 290 aa3.06□□□□□ -1.92
SNORA40.2-201ENST00000390847 IGHV1OR15-1A0A075B7D0 117 aa3.05□□□□□ -1.92
SNORA40.2-201ENST00000390847 PP2D1A8MPX8 630 aa3.05□□□□□ -1.92
SNORA40.2-201ENST00000390847 A8MUI8 341 aa3.05□□□□□ -1.92
SNORA40.2-201ENST00000390847 ZNF705EA8MWA4 302 aaPredicted RBP3.05□□□□□ -1.92
SNORA40.2-201ENST00000390847 K7EPI3 171 aa3.05□□□□□ -1.92
SNORA40.2-201ENST00000390847 SULT2B1O00204 365 aa3.05□□□□□ -1.92
SNORA40.2-201ENST00000390847 ZNF264O43296 627 aa3.05□□□□□ -1.92
SNORA40.2-201ENST00000390847 SMPD2O60906 423 aa3.05□□□□□ -1.92
SNORA40.2-201ENST00000390847 TM7SF2O76062 418 aa3.05□□□□□ -1.92
SNORA40.2-201ENST00000390847 UFL1O94874 794 aa3.05□□□□□ -1.92
SNORA40.2-201ENST00000390847 IGLV1-47P01700 117 aa3.05□□□□□ -1.92
SNORA40.2-201ENST00000390847 TBXA2RP21731 343 aa3.05□□□□□ -1.92
SNORA40.2-201ENST00000390847 NMT1P30419 496 aaKnown RBP3.05□□□□□ -1.92
SNORA40.2-201ENST00000390847 ACADVLP49748 655 aa3.05□□□□□ -1.92
SNORA40.2-201ENST00000390847 CAV2P51636 162 aa3.05□□□□□ -1.92
SNORA40.2-201ENST00000390847 TIMM10P62072 90 aa3.05□□□□□ -1.92
SNORA40.2-201ENST00000390847 PJVKQ0ZLH3 352 aa3.05□□□□□ -1.92
SNORA40.2-201ENST00000390847 RABGAP1LQ5R372 815 aa3.05□□□□□ -1.92
SNORA40.2-201ENST00000390847 RIPPLY2Q5TAB7 128 aa3.05□□□□□ -1.92
SNORA40.2-201ENST00000390847 OTPQ5XKR4 325 aa3.05□□□□□ -1.92
SNORA40.2-201ENST00000390847 NCR3LG1Q68D85 454 aa3.05□□□□□ -1.92
SNORA40.2-201ENST00000390847 FAM199XQ6PEV8 388 aaPredicted RBP3.05□□□□□ -1.92
SNORA40.2-201ENST00000390847 ARCQ7LC44 396 aa3.05□□□□□ -1.92
SNORA40.2-201ENST00000390847 ACOT1Q86TX2 421 aa3.05□□□□□ -1.92
SNORA40.2-201ENST00000390847 GRAMD2AQ8IUY3 354 aa3.05□□□□□ -1.92
SNORA40.2-201ENST00000390847 C15orf54Q8N8G6 183 aa3.05□□□□□ -1.92
SNORA40.2-201ENST00000390847 TBC1D31Q96DN5 1066 aa3.05□□□□□ -1.92
SNORA40.2-201ENST00000390847 CYYR1Q96J86 154 aa3.05□□□□□ -1.92
SNORA40.2-201ENST00000390847 TXN2Q99757 166 aa3.05□□□□□ -1.92
SNORA40.2-201ENST00000390847 SLC6A7Q99884 636 aa3.05□□□□□ -1.92
SNORA40.2-201ENST00000390847 TPPP3Q9BW30 176 aa3.05□□□□□ -1.92
SNORA40.2-201ENST00000390847 NXF5Q9H1B4 397 aaKnown RBP3.05□□□□□ -1.92
SNORA40.2-201ENST00000390847 OR51J1Q9H342 316 aa3.05□□□□□ -1.92
SNORA40.2-201ENST00000390847 LIN28AQ9H9Z2 209 aaKnown RBP3.05□□□□□ -1.92
SNORA40.2-201ENST00000390847 SDAD1Q9NVU7 687 aaKnown RBP eCLIP3.05□□□□□ -1.92
SNORA40.2-201ENST00000390847 AIPL1Q9NZN9 384 aa3.05□□□□□ -1.92
SNORA40.2-201ENST00000390847 WRAP73Q9P2S5 460 aaPredicted RBP3.05□□□□□ -1.92
SNORA40.2-201ENST00000390847 GNG12Q9UBI6 72 aa3.05□□□□□ -1.92
SNORA40.2-201ENST00000390847 LAMP5Q9UJQ1 280 aa3.05□□□□□ -1.92
SNORA40.2-201ENST00000390847 SCML2Q9UQR0 700 aa3.05□□□□□ -1.92
SNORA40.2-201ENST00000390847 IFT52Q9Y366 437 aa3.05□□□□□ -1.92
SNORA40.2-201ENST00000390847 KIF2AO00139 706 aaPredicted RBP3.04□□□□□ -1.92
SNORA40.2-201ENST00000390847 MSH4O15457 936 aa3.04□□□□□ -1.92
SNORA40.2-201ENST00000390847 OR1F1O43749 312 aa3.04□□□□□ -1.92
SNORA40.2-201ENST00000390847 HCN1O60741 890 aa3.04□□□□□ -1.92
SNORA40.2-201ENST00000390847 UGT2B17O75795 530 aa3.04□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms