RNA–Protein interactions for RNA: ENST00000389629.8

RTF1-201, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTF1, Length 5,021 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-201ENST00000389629 MPP7Q5T2T1 576 aa13.35□□□□□ -0.27
RTF1-201ENST00000389629 OR2L2Q8NH16 312 aa13.35□□□□□ -0.27
RTF1-201ENST00000389629 DUSP19Q8WTR2 217 aa13.35□□□□□ -0.27
RTF1-201ENST00000389629 CLSTN3Q9BQT9 956 aa13.35□□□□□ -0.27
RTF1-201ENST00000389629 SYNDIG1Q9H7V2 258 aa13.35□□□□□ -0.27
RTF1-201ENST00000389629 DOCK1Q14185 1865 aa13.35□□□□□ -0.27
RTF1-201ENST00000389629 TRIM64A6NGJ6 449 aa13.35□□□□□ -0.27
RTF1-201ENST00000389629 AKR1C4P17516 323 aa13.35□□□□□ -0.27
RTF1-201ENST00000389629 MC3RP41968 323 aa13.35□□□□□ -0.27
RTF1-201ENST00000389629 AKR1C2P52895 323 aa13.35□□□□□ -0.27
RTF1-201ENST00000389629 AKR1C1Q04828 323 aa13.35□□□□□ -0.27
RTF1-201ENST00000389629 HYAL2Q12891 473 aa13.35□□□□□ -0.27
RTF1-201ENST00000389629 SYT9Q86SS6 491 aa13.35□□□□□ -0.27
RTF1-201ENST00000389629 ZNF101Q8IZC7 436 aa13.35□□□□□ -0.27
RTF1-201ENST00000389629 LGALS14Q8TCE9 139 aa13.35□□□□□ -0.27
RTF1-201ENST00000389629 PAQR8Q8TEZ7 354 aa13.35□□□□□ -0.27
RTF1-201ENST00000389629 GHSRQ92847 366 aa13.35□□□□□ -0.27
RTF1-201ENST00000389629 FLVCR2Q9UPI3 526 aa13.35□□□□□ -0.27
RTF1-201ENST00000389629 LATO43561 262 aa13.35□□□□□ -0.27
RTF1-201ENST00000389629 HRO43593 1189 aa13.35□□□□□ -0.27
RTF1-201ENST00000389629 RENP00797 406 aa13.35□□□□□ -0.27
RTF1-201ENST00000389629 ADH5P11766 374 aa13.35□□□□□ -0.27
RTF1-201ENST00000389629 C6P13671 934 aa13.35□□□□□ -0.27
RTF1-201ENST00000389629 PSMB5P28074 263 aa13.35□□□□□ -0.27
RTF1-201ENST00000389629 S100A11P31949 105 aa13.35□□□□□ -0.27
RTF1-201ENST00000389629 VITQ6UXI7 678 aa13.35□□□□□ -0.27
RTF1-201ENST00000389629 MOAP1Q96BY2 351 aa13.35□□□□□ -0.27
RTF1-201ENST00000389629 DPYSL5Q9BPU6 564 aa13.35□□□□□ -0.27
RTF1-201ENST00000389629 UQCC2Q9BRT2 126 aa13.35□□□□□ -0.27
RTF1-201ENST00000389629 RAB11FIP5Q9BXF6 653 aa13.35□□□□□ -0.27
RTF1-201ENST00000389629 C20orf85Q9H1P6 137 aa13.35□□□□□ -0.27
RTF1-201ENST00000389629 CPEP16870 476 aa13.35□□□□□ -0.27
RTF1-201ENST00000389629 DLSTP36957 453 aa13.35□□□□□ -0.27
RTF1-201ENST00000389629 KLHDC8AQ8IYD2 350 aa13.35□□□□□ -0.27
RTF1-201ENST00000389629 OR6M1Q8NGM8 313 aa13.35□□□□□ -0.27
RTF1-201ENST00000389629 LRRC46Q96FV0 321 aa13.35□□□□□ -0.27
RTF1-201ENST00000389629 HS6ST2Q96MM7 605 aa13.35□□□□□ -0.27
RTF1-201ENST00000389629 COL4A5P29400 1685 aa13.34□□□□□ -0.27
RTF1-201ENST00000389629 C1orf226A1L170 272 aa13.34□□□□□ -0.27
RTF1-201ENST00000389629 NAP1L6A6NFF2 107 aa13.34□□□□□ -0.27
RTF1-201ENST00000389629 ERVH48-1M5A8F1 160 aa13.34□□□□□ -0.27
RTF1-201ENST00000389629 FOXE1O00358 373 aaPredicted RBP13.34□□□□□ -0.27
RTF1-201ENST00000389629 UBL3O95164 117 aa13.34□□□□□ -0.27
RTF1-201ENST00000389629 NFATC1O95644 943 aa13.34□□□□□ -0.27
RTF1-201ENST00000389629 ZNF35P13682 527 aa13.34□□□□□ -0.27
RTF1-201ENST00000389629 TCEAL3Q969E4 200 aa13.34□□□□□ -0.27
RTF1-201ENST00000389629 MARCH5Q9NX47 278 aa13.34□□□□□ -0.27
RTF1-201ENST00000389629 ACOD1A6NK06 481 aa13.34□□□□□ -0.27
RTF1-201ENST00000389629 MTRF1O75570 445 aaKnown RBP13.34□□□□□ -0.27
RTF1-201ENST00000389629 PPP3CBP16298 524 aa13.34□□□□□ -0.27
RTF1-201ENST00000389629 RFX2P48378 723 aa13.34□□□□□ -0.27
RTF1-201ENST00000389629 KCNJ5P48544 419 aa13.34□□□□□ -0.27
RTF1-201ENST00000389629 ACTA2P62736 377 aa13.34□□□□□ -0.27
RTF1-201ENST00000389629 ACTG2P63267 376 aa13.34□□□□□ -0.27
RTF1-201ENST00000389629 SDR9C7Q8NEX9 313 aa13.34□□□□□ -0.27
RTF1-201ENST00000389629 ABHD4Q8TB40 342 aa13.34□□□□□ -0.27
RTF1-201ENST00000389629 ACOT11Q8WXI4 607 aaPredicted RBP13.34□□□□□ -0.27
RTF1-201ENST00000389629 UPRTQ96BW1 309 aa13.34□□□□□ -0.27
RTF1-201ENST00000389629 MSLNLQ96KJ4 702 aa13.34□□□□□ -0.27
RTF1-201ENST00000389629 PINK1Q9BXM7 581 aa13.34□□□□□ -0.27
RTF1-201ENST00000389629 DPP7Q9UHL4 492 aa13.34□□□□□ -0.27
RTF1-201ENST00000389629 CLEC4EQ9ULY5 219 aa13.34□□□□□ -0.27
RTF1-201ENST00000389629 EXO1Q9UQ84 846 aaKnown RBP13.34□□□□□ -0.27
RTF1-201ENST00000389629 ACOT7O00154 380 aa13.34□□□□□ -0.27
RTF1-201ENST00000389629 ERVK-21P61565 698 aa13.34□□□□□ -0.27
RTF1-201ENST00000389629 NNATQ16517 81 aa13.34□□□□□ -0.27
RTF1-201ENST00000389629 C17orf99Q6UX52 265 aa13.34□□□□□ -0.27
RTF1-201ENST00000389629 ZNF584Q8IVC4 421 aa13.34□□□□□ -0.27
RTF1-201ENST00000389629 CPA6Q8N4T0 437 aa13.34□□□□□ -0.27
RTF1-201ENST00000389629 LDHAL6BQ9BYZ2 381 aaPredicted RBP13.34□□□□□ -0.27
RTF1-201ENST00000389629 ZNF334Q9HCZ1 680 aaPredicted RBP13.34□□□□□ -0.27
RTF1-201ENST00000389629 TRAV27A0A087WT01 109 aa13.34□□□□□ -0.27
RTF1-201ENST00000389629 NPIPA5A0A0B4J1W7 369 aa13.34□□□□□ -0.27
RTF1-201ENST00000389629 LEUTXA8MZ59 168 aa13.34□□□□□ -0.27
RTF1-201ENST00000389629 NPIPA7E9PJI5 369 aa13.34□□□□□ -0.27
RTF1-201ENST00000389629 GFYI3L273 518 aa13.34□□□□□ -0.27
RTF1-201ENST00000389629 RGS11O94810 467 aa13.34□□□□□ -0.27
RTF1-201ENST00000389629 FGF19O95750 216 aa13.34□□□□□ -0.27
RTF1-201ENST00000389629 SFTPBP07988 381 aa13.34□□□□□ -0.27
RTF1-201ENST00000389629 NPIPA8P0DM63 369 aa13.34□□□□□ -0.27
RTF1-201ENST00000389629 TRIM23P36406 574 aa13.34□□□□□ -0.27
RTF1-201ENST00000389629 PRLHRP49683 370 aa13.34□□□□□ -0.27
RTF1-201ENST00000389629 TSPAN31Q12999 210 aa13.34□□□□□ -0.27
RTF1-201ENST00000389629 FAM71E1Q6IPT2 247 aa13.34□□□□□ -0.27
RTF1-201ENST00000389629 MEPCEQ7L2J0 689 aaKnown RBP13.34□□□□□ -0.27
RTF1-201ENST00000389629 LRRC56Q8IYG6 542 aaPredicted RBP13.34□□□□□ -0.27
RTF1-201ENST00000389629 WFIKKN2Q8TEU8 576 aa13.34□□□□□ -0.27
RTF1-201ENST00000389629 TBC1D20Q96BZ9 403 aa13.34□□□□□ -0.27
RTF1-201ENST00000389629 KCTD12Q96CX2 325 aaKnown RBP13.34□□□□□ -0.27
RTF1-201ENST00000389629 EID2BQ96D98 161 aa13.34□□□□□ -0.27
RTF1-201ENST00000389629 CPEB1Q9BZB8 566 aaKnown RBP13.34□□□□□ -0.27
RTF1-201ENST00000389629 C1GALT1Q9NS00 363 aa13.34□□□□□ -0.27
RTF1-201ENST00000389629 LY75O60449 1722 aa13.33□□□□□ -0.27
RTF1-201ENST00000389629 COL11A2P13942 1736 aaPredicted RBP13.33□□□□□ -0.27
RTF1-201ENST00000389629 GXYLT2A0PJZ3 443 aa13.33□□□□□ -0.27
RTF1-201ENST00000389629 VNN2O95498 520 aa13.33□□□□□ -0.27
RTF1-201ENST00000389629 TIMP2P16035 220 aa13.33□□□□□ -0.27
RTF1-201ENST00000389629 ANXA7P20073 488 aaKnown RBP13.33□□□□□ -0.27
RTF1-201ENST00000389629 CRYBB2P43320 205 aa13.33□□□□□ -0.27
RTF1-201ENST00000389629 MTNR1BP49286 362 aa13.33□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms