RNA–Protein interactions for RNA: ENST00000384706.1

SNORD28-201, Transcript of small nucleolar RNA, C/D box 28, humanhuman

BASIC

Gene SNORD28, Length 75 nt, Biotype snoRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD28-201ENST00000384706 RFLNAQ6ZTI6 216 aa0.1□□□□□ -2.39
SNORD28-201ENST00000384706 PRSS41Q7RTY9 318 aa0.1□□□□□ -2.39
SNORD28-201ENST00000384706 CAMK2N1Q7Z7J9 78 aa0.1□□□□□ -2.39
SNORD28-201ENST00000384706 RANBP3LQ86VV4 465 aaPredicted RBP0.1□□□□□ -2.39
SNORD28-201ENST00000384706 IFNEQ86WN2 208 aa0.1□□□□□ -2.39
SNORD28-201ENST00000384706 HIST2H2ABQ8IUE6 130 aaPredicted RBP0.1□□□□□ -2.39
SNORD28-201ENST00000384706 STHQ8IWL8 128 aa0.1□□□□□ -2.39
SNORD28-201ENST00000384706 NRMQ8IXM6 262 aa0.1□□□□□ -2.39
SNORD28-201ENST00000384706 TMEM183AQ8IXX5 376 aa0.1□□□□□ -2.39
SNORD28-201ENST00000384706 EXOC8Q8IYI6 725 aa0.1□□□□□ -2.39
SNORD28-201ENST00000384706 NUP93Q8N1F7 819 aa0.1□□□□□ -2.39
SNORD28-201ENST00000384706 MLKLQ8NB16 471 aa0.1□□□□□ -2.39
SNORD28-201ENST00000384706 NHLRC2Q8NBF2 726 aa0.1□□□□□ -2.39
SNORD28-201ENST00000384706 Q8NDZ9 215 aa0.1□□□□□ -2.39
SNORD28-201ENST00000384706 GMCL1P1Q8NEA9 526 aa0.1□□□□□ -2.39
SNORD28-201ENST00000384706 CCDC54Q8NEL0 328 aa0.1□□□□□ -2.39
SNORD28-201ENST00000384706 Q8NFD4 153 aa0.1□□□□□ -2.39
SNORD28-201ENST00000384706 NPBQ8NG41 125 aa0.1□□□□□ -2.39
SNORD28-201ENST00000384706 OR1P1Q8NH06 330 aa0.1□□□□□ -2.39
SNORD28-201ENST00000384706 OR5W2Q8NH69 310 aa0.1□□□□□ -2.39
SNORD28-201ENST00000384706 FANK1Q8TC84 345 aa0.1□□□□□ -2.39
SNORD28-201ENST00000384706 ZFP90Q8TF47 636 aa0.1□□□□□ -2.39
SNORD28-201ENST00000384706 RGP1Q92546 391 aaPredicted RBP0.1□□□□□ -2.39
SNORD28-201ENST00000384706 ESR2Q92731 530 aa0.1□□□□□ -2.39
SNORD28-201ENST00000384706 ART4Q93070 314 aa0.1□□□□□ -2.39
SNORD28-201ENST00000384706 HIST1H2ACQ93077 130 aa0.1□□□□□ -2.39
SNORD28-201ENST00000384706 EXOSC8Q96B26 276 aaKnown RBP0.1□□□□□ -2.39
SNORD28-201ENST00000384706 AP2M1Q96CW1 435 aa0.1□□□□□ -2.39
SNORD28-201ENST00000384706 LRRC58Q96CX6 371 aa0.1□□□□□ -2.39
SNORD28-201ENST00000384706 RAB39BQ96DA2 213 aa0.1□□□□□ -2.39
SNORD28-201ENST00000384706 ASB9Q96DX5 294 aa0.1□□□□□ -2.39
SNORD28-201ENST00000384706 TIMD4Q96H15 378 aa0.1□□□□□ -2.39
SNORD28-201ENST00000384706 DEFB118Q96PH6 123 aa0.1□□□□□ -2.39
SNORD28-201ENST00000384706 PARK7Q99497 189 aaKnown RBP0.1□□□□□ -2.39
SNORD28-201ENST00000384706 NAP1L4Q99733 375 aaKnown RBP0.1□□□□□ -2.39
SNORD28-201ENST00000384706 TSG101Q99816 390 aa0.1□□□□□ -2.39
SNORD28-201ENST00000384706 NUDT16L1Q9BRJ7 211 aaKnown RBP0.1□□□□□ -2.39
SNORD28-201ENST00000384706 OR11A1Q9GZK7 315 aa0.1□□□□□ -2.39
SNORD28-201ENST00000384706 NAPBQ9H115 298 aa0.1□□□□□ -2.39
SNORD28-201ENST00000384706 LHX5Q9H2C1 402 aa0.1□□□□□ -2.39
SNORD28-201ENST00000384706 TMEM245Q9H330 911 aa0.1□□□□□ -2.39
SNORD28-201ENST00000384706 DUS2Q9NX74 493 aaKnown RBP0.1□□□□□ -2.39
SNORD28-201ENST00000384706 SEPT10Q9P0V9 454 aa0.1□□□□□ -2.39
SNORD28-201ENST00000384706 RIMS3Q9UJD0 308 aa0.1□□□□□ -2.39
SNORD28-201ENST00000384706 ANAPC5Q9UJX4 755 aa0.1□□□□□ -2.39
SNORD28-201ENST00000384706 FBXL5Q9UKA1 691 aa0.1□□□□□ -2.39
SNORD28-201ENST00000384706 CDH9Q9ULB4 789 aa0.1□□□□□ -2.39
SNORD28-201ENST00000384706 ENTPD4Q9Y227 616 aa0.1□□□□□ -2.39
SNORD28-201ENST00000384706 ASF1AQ9Y294 204 aa0.1□□□□□ -2.39
SNORD28-201ENST00000384706 PLLPQ9Y342 182 aa0.1□□□□□ -2.39
SNORD28-201ENST00000384706 EXOSC1Q9Y3B2 195 aaKnown RBP0.1□□□□□ -2.39
SNORD28-201ENST00000384706 MAD1L1Q9Y6D9 718 aa0.1□□□□□ -2.39
SNORD28-201ENST00000384706 CACNA1DQ01668 2161 aa0.1□□□□□ -2.39
SNORD28-201ENST00000384706 PTPRUQ92729 1446 aa0.1□□□□□ -2.39
SNORD28-201ENST00000384706 NOTCH1P46531 2555 aa0.09□□□□□ -2.39
SNORD28-201ENST00000384706 TRAV34A0A0B4J273 112 aa0.09□□□□□ -2.4
SNORD28-201ENST00000384706 A0A0G2JN53 185 aa0.09□□□□□ -2.4
SNORD28-201ENST00000384706 A0A0G2JRQ6 117 aa0.09□□□□□ -2.4
SNORD28-201ENST00000384706 LOC100131303A0A0U1RQF7 123 aa0.09□□□□□ -2.4
SNORD28-201ENST00000384706 A0A1B0GUL7 405 aa0.09□□□□□ -2.4
SNORD28-201ENST00000384706 RBMY1BA6NDE4 496 aaKnown RBP0.09□□□□□ -2.4
SNORD28-201ENST00000384706 RBMY1EA6NEQ0 496 aaKnown RBP0.09□□□□□ -2.4
SNORD28-201ENST00000384706 ZNF705EA8MWA4 302 aaPredicted RBP0.09□□□□□ -2.4
SNORD28-201ENST00000384706 FCN1O00602 326 aa0.09□□□□□ -2.4
SNORD28-201ENST00000384706 OVOL1O14753 267 aa0.09□□□□□ -2.4
SNORD28-201ENST00000384706 CHEK1O14757 476 aa0.09□□□□□ -2.4
SNORD28-201ENST00000384706 IFIT3O14879 490 aaKnown RBP0.09□□□□□ -2.4
SNORD28-201ENST00000384706 P4HA2O15460 535 aa0.09□□□□□ -2.4
SNORD28-201ENST00000384706 RBFOX2O43251 390 aaKnown RBP eCLIP0.09□□□□□ -2.4
SNORD28-201ENST00000384706 CD5LO43866 347 aa0.09□□□□□ -2.4
SNORD28-201ENST00000384706 RAMP1O60894 148 aa0.09□□□□□ -2.4
SNORD28-201ENST00000384706 TRIM3O75382 744 aaPredicted RBP0.09□□□□□ -2.4
SNORD28-201ENST00000384706 SUPT3HO75486 399 aa0.09□□□□□ -2.4
SNORD28-201ENST00000384706 SRP72O76094 671 aaKnown RBP0.09□□□□□ -2.4
SNORD28-201ENST00000384706 IGLV6-57P01721 117 aa0.09□□□□□ -2.4
SNORD28-201ENST00000384706 PRB1P04280 392 aa0.09□□□□□ -2.4
SNORD28-201ENST00000384706 IL4P05112 153 aa0.09□□□□□ -2.4
SNORD28-201ENST00000384706 ALPPP05187 535 aa0.09□□□□□ -2.4
SNORD28-201ENST00000384706 SFTPBP07988 381 aa0.09□□□□□ -2.4
SNORD28-201ENST00000384706 RBMY1DP0C7P1 496 aaKnown RBP0.09□□□□□ -2.4
SNORD28-201ENST00000384706 LINC00869P0C866 280 aa0.09□□□□□ -2.4
SNORD28-201ENST00000384706 RBMY1A1P0DJD3 496 aaKnown RBP0.09□□□□□ -2.4
SNORD28-201ENST00000384706 RBMY1CP0DJD4 496 aa0.09□□□□□ -2.4
SNORD28-201ENST00000384706 PRB4P10163 310 aaPredicted RBP0.09□□□□□ -2.4
SNORD28-201ENST00000384706 ICAM2P13598 275 aa0.09□□□□□ -2.4
SNORD28-201ENST00000384706 PSMC3P17980 439 aa0.09□□□□□ -2.4
SNORD28-201ENST00000384706 FCARP24071 287 aa0.09□□□□□ -2.4
SNORD28-201ENST00000384706 CTNNA1P35221 906 aaKnown RBP0.09□□□□□ -2.4
SNORD28-201ENST00000384706 SLC26A3P40879 764 aa0.09□□□□□ -2.4
SNORD28-201ENST00000384706 GNPDA1P46926 289 aa0.09□□□□□ -2.4
SNORD28-201ENST00000384706 EMDP50402 254 aa0.09□□□□□ -2.4
SNORD28-201ENST00000384706 NOVA1P51513 510 aaKnown RBP0.09□□□□□ -2.4
SNORD28-201ENST00000384706 RND3P61587 244 aa0.09□□□□□ -2.4
SNORD28-201ENST00000384706 ST8SIA6P61647 398 aa0.09□□□□□ -2.4
SNORD28-201ENST00000384706 SELENOTP62341 195 aa0.09□□□□□ -2.4
SNORD28-201ENST00000384706 RPL8P62917 257 aaKnown RBP0.09□□□□□ -2.4
SNORD28-201ENST00000384706 PITPNAQ00169 270 aa0.09□□□□□ -2.4
SNORD28-201ENST00000384706 EWSR1Q01844 656 aaKnown RBP eCLIP0.09□□□□□ -2.4
SNORD28-201ENST00000384706 SRYQ05066 204 aa0.09□□□□□ -2.4
SNORD28-201ENST00000384706 CCDC173Q0VFZ6 552 aa0.09□□□□□ -2.4
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms