RNA–Protein interactions for RNA: ENST00000380871.4

NKX3-1-201, Transcript of NK3 homeobox 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NKX3-1, Length 3,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX3-1-201ENST00000380871 OR10H4Q8NGA5 316 aa15.11■□□□□ 0.01
NKX3-1-201ENST00000380871 OR52N1Q8NH53 320 aa15.11■□□□□ 0.01
NKX3-1-201ENST00000380871 ABHD1Q96SE0 405 aa15.11■□□□□ 0.01
NKX3-1-201ENST00000380871 NUDT15Q9NV35 164 aa15.11■□□□□ 0.01
NKX3-1-201ENST00000380871 H2AFY2Q9P0M6 372 aaPredicted RBP15.11■□□□□ 0.01
NKX3-1-201ENST00000380871 POLHQ9Y253 713 aa15.11■□□□□ 0.01
NKX3-1-201ENST00000380871 SLC17A4Q9Y2C5 497 aa15.11■□□□□ 0.01
NKX3-1-201ENST00000380871 GIMAP1-GIMAP5A0A087WTJ2 511 aa15.1■□□□□ 0.01
NKX3-1-201ENST00000380871 A0A1W2PPK0 400 aa15.1■□□□□ 0.01
NKX3-1-201ENST00000380871 A0A1W2PQF6 199 aa15.1■□□□□ 0.01
NKX3-1-201ENST00000380871 CHST10O43529 356 aa15.1■□□□□ 0.01
NKX3-1-201ENST00000380871 RGS9O75916 674 aaPredicted RBP15.1■□□□□ 0.01
NKX3-1-201ENST00000380871 CSNK2A2P19784 350 aaPredicted RBP15.1■□□□□ 0.01
NKX3-1-201ENST00000380871 CTHP32929 405 aa15.1■□□□□ 0.01
NKX3-1-201ENST00000380871 PRR5P85299 388 aa15.1■□□□□ 0.01
NKX3-1-201ENST00000380871 SLC25A35Q3KQZ1 300 aa15.1■□□□□ 0.01
NKX3-1-201ENST00000380871 SLC48A1Q6P1K1 146 aa15.1■□□□□ 0.01
NKX3-1-201ENST00000380871 C9orf62Q8N4C0 152 aa15.1■□□□□ 0.01
NKX3-1-201ENST00000380871 OR56A1Q8NGH5 318 aa15.1■□□□□ 0.01
NKX3-1-201ENST00000380871 GIMAP5Q96F15 307 aa15.1■□□□□ 0.01
NKX3-1-201ENST00000380871 TIMM29Q9BSF4 260 aa15.1■□□□□ 0.01
NKX3-1-201ENST00000380871 ZNF624Q9P2J8 865 aaPredicted RBP15.1■□□□□ 0.01
NKX3-1-201ENST00000380871 FBXL4Q9UKA2 621 aa15.1■□□□□ 0.01
NKX3-1-201ENST00000380871 NCKAP1Q9Y2A7 1128 aa15.1■□□□□ 0.01
NKX3-1-201ENST00000380871 THBS2P35442 1172 aa15.1■□□□□ 0.01
NKX3-1-201ENST00000380871 ARPC4P59998 168 aa15.1■□□□□ 0.01
NKX3-1-201ENST00000380871 MRPL28Q13084 256 aaKnown RBP15.1■□□□□ 0.01
NKX3-1-201ENST00000380871 BHLHB9Q6PI77 547 aa15.1■□□□□ 0.01
NKX3-1-201ENST00000380871 OR2L5Q8NG80 312 aa15.1■□□□□ 0.01
NKX3-1-201ENST00000380871 OR7G2Q8NG99 324 aa15.1■□□□□ 0.01
NKX3-1-201ENST00000380871 GTPBP2Q9BX10 602 aaKnown RBP15.1■□□□□ 0.01
NKX3-1-201ENST00000380871 KLHL1Q9NR64 748 aa15.1■□□□□ 0.01
NKX3-1-201ENST00000380871 NPIPA5A0A0B4J1W7 369 aa15.09■□□□□ 0.01
NKX3-1-201ENST00000380871 NPIPA7E9PJI5 369 aa15.09■□□□□ 0.01
NKX3-1-201ENST00000380871 J3QRE1 110 aa15.09■□□□□ 0.01
NKX3-1-201ENST00000380871 SYT5O00445 386 aa15.09■□□□□ 0.01
NKX3-1-201ENST00000380871 EMC8O43402 210 aa15.09■□□□□ 0.01
NKX3-1-201ENST00000380871 PLRG1O43660 514 aaKnown RBP15.09■□□□□ 0.01
NKX3-1-201ENST00000380871 CHP2O43745 196 aa15.09■□□□□ 0.01
NKX3-1-201ENST00000380871 ICMTO60725 284 aa15.09■□□□□ 0.01
NKX3-1-201ENST00000380871 NPIPA8P0DM63 369 aa15.09■□□□□ 0.01
NKX3-1-201ENST00000380871 NDUFV2P19404 249 aa15.09■□□□□ 0.01
NKX3-1-201ENST00000380871 RIN1Q13671 783 aa15.09■□□□□ 0.01
NKX3-1-201ENST00000380871 MRM1Q6IN84 353 aaKnown RBP15.09■□□□□ 0.01
NKX3-1-201ENST00000380871 FRRS1Q6ZNA5 592 aa15.09■□□□□ 0.01
NKX3-1-201ENST00000380871 MBOAT2Q6ZWT7 520 aa15.09■□□□□ 0.01
NKX3-1-201ENST00000380871 PCNPQ8WW12 178 aaKnown RBP15.09■□□□□ 0.01
NKX3-1-201ENST00000380871 MS4A3Q96HJ5 214 aa15.09■□□□□ 0.01
NKX3-1-201ENST00000380871 NT5DC2Q9H857 520 aa15.09■□□□□ 0.01
NKX3-1-201ENST00000380871 TMEM74BQ9NUR3 256 aa15.09■□□□□ 0.01
NKX3-1-201ENST00000380871 COLEC10Q9Y6Z7 277 aa15.09■□□□□ 0.01
NKX3-1-201ENST00000380871 ARHGEF17Q96PE2 2063 aaPredicted RBP15.09■□□□□ 0.01
NKX3-1-201ENST00000380871 OR6C74A6NCV1 312 aa15.09■□□□□ 0.01
NKX3-1-201ENST00000380871 MAGEB4O15481 346 aaPredicted RBP15.09■□□□□ 0.01
NKX3-1-201ENST00000380871 ACVR1BP36896 505 aa15.09■□□□□ 0.01
NKX3-1-201ENST00000380871 STAT5AP42229 794 aa15.09■□□□□ 0.01
NKX3-1-201ENST00000380871 TRA2BP62995 288 aaKnown RBP15.09■□□□□ 0.01
NKX3-1-201ENST00000380871 GNA13Q14344 377 aa15.09■□□□□ 0.01
NKX3-1-201ENST00000380871 ZIC1Q15915 447 aa15.09■□□□□ 0.01
NKX3-1-201ENST00000380871 PLA1AQ53H76 456 aa15.09■□□□□ 0.01
NKX3-1-201ENST00000380871 ESPNLQ6ZVH7 1005 aa15.09■□□□□ 0.01
NKX3-1-201ENST00000380871 ELMOD2Q8IZ81 293 aa15.09■□□□□ 0.01
NKX3-1-201ENST00000380871 DEFB119Q8N690 84 aa15.09■□□□□ 0.01
NKX3-1-201ENST00000380871 OR11H7Q8NGC8 314 aa15.09■□□□□ 0.01
NKX3-1-201ENST00000380871 OR5M3Q8NGP4 307 aa15.09■□□□□ 0.01
NKX3-1-201ENST00000380871 SFXN5Q8TD22 340 aa15.09■□□□□ 0.01
NKX3-1-201ENST00000380871 OR52D1Q9H346 318 aa15.09■□□□□ 0.01
NKX3-1-201ENST00000380871 ASB6Q9NWX5 421 aa15.09■□□□□ 0.01
NKX3-1-201ENST00000380871 ZNF780BQ9Y6R6 833 aa15.09■□□□□ 0.01
NKX3-1-201ENST00000380871 PIAS3Q9Y6X2 628 aa15.09■□□□□ 0.01
NKX3-1-201ENST00000380871 POU2F2P09086 479 aa15.09■□□□□ 0.01
NKX3-1-201ENST00000380871 MAKP20794 623 aa15.09■□□□□ 0.01
NKX3-1-201ENST00000380871 NOS3P29474 1203 aa15.09■□□□□ 0.01
NKX3-1-201ENST00000380871 DECR1Q16698 335 aa15.09■□□□□ 0.01
NKX3-1-201ENST00000380871 PUS10Q3MIT2 529 aaKnown RBP15.09■□□□□ 0.01
NKX3-1-201ENST00000380871 NIPAL3Q6P499 406 aa15.09■□□□□ 0.01
NKX3-1-201ENST00000380871 ACBD7Q8N6N7 88 aa15.09■□□□□ 0.01
NKX3-1-201ENST00000380871 RPLP0P6Q8NHW5 317 aa15.09■□□□□ 0.01
NKX3-1-201ENST00000380871 RFT1Q96AA3 541 aa15.09■□□□□ 0.01
NKX3-1-201ENST00000380871 CREB3L1Q96BA8 519 aa15.09■□□□□ 0.01
NKX3-1-201ENST00000380871 ELSPBP1Q96BH3 223 aa15.09■□□□□ 0.01
NKX3-1-201ENST00000380871 ZNF681Q96N22 645 aa15.09■□□□□ 0.01
NKX3-1-201ENST00000380871 OR51V1Q9H2C8 321 aa15.09■□□□□ 0.01
NKX3-1-201ENST00000380871 TCEAL2Q9H3H9 227 aaPredicted RBP15.09■□□□□ 0.01
NKX3-1-201ENST00000380871 CYSLTR2Q9NS75 346 aa15.09■□□□□ 0.01
NKX3-1-201ENST00000380871 BABAM2Q9NXR7 383 aa15.09■□□□□ 0.01
NKX3-1-201ENST00000380871 ZNF443Q9Y2A4 671 aaPredicted RBP15.09■□□□□ 0.01
NKX3-1-201ENST00000380871 A0A1W2PQ72 361 aa15.08■□□□□ 0
NKX3-1-201ENST00000380871 SLC19A2O60779 497 aa15.08■□□□□ 0
NKX3-1-201ENST00000380871 CRYZL1O95825 349 aa15.08■□□□□ 0
NKX3-1-201ENST00000380871 GYPBP06028 91 aa15.08■□□□□ 0
NKX3-1-201ENST00000380871 CD3GP09693 182 aa15.08■□□□□ 0
NKX3-1-201ENST00000380871 TYRP1P17643 537 aa15.08■□□□□ 0
NKX3-1-201ENST00000380871 CXCL3P19876 107 aa15.08■□□□□ 0
NKX3-1-201ENST00000380871 PAICSP22234 425 aaKnown RBP15.08■□□□□ 0
NKX3-1-201ENST00000380871 HOXD11P31277 338 aaPredicted RBP15.08■□□□□ 0
NKX3-1-201ENST00000380871 RPS7P62081 194 aaKnown RBP15.08■□□□□ 0
NKX3-1-201ENST00000380871 GPR68Q15743 365 aa15.08■□□□□ 0
NKX3-1-201ENST00000380871 THSD4Q6ZMP0 1018 aa15.08■□□□□ 0
NKX3-1-201ENST00000380871 ZNF836Q6ZNA1 936 aa15.08■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms