RNA–Protein interactions for RNA: ENST00000375740.7

MSH5-202, Transcript of mutS homolog 5, humanhuman

TSL 1 (best) BASIC

Gene MSH5, Length 2,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-202ENST00000375740 SLC41A3Q96GZ6 507 aa12.98□□□□□ -0.33
MSH5-202ENST00000375740 DIRAS2Q96HU8 199 aa12.98□□□□□ -0.33
MSH5-202ENST00000375740 ANKRD19PQ9H560 264 aa12.98□□□□□ -0.33
MSH5-202ENST00000375740 CACYBPQ9HB71 228 aaKnown RBP12.98□□□□□ -0.33
MSH5-202ENST00000375740 FBXO34Q9NWN3 711 aa12.98□□□□□ -0.33
MSH5-202ENST00000375740 WSB2Q9NYS7 404 aaPredicted RBP12.98□□□□□ -0.33
MSH5-202ENST00000375740 CMAHPQ9Y471 501 aa12.98□□□□□ -0.33
MSH5-202ENST00000375740 DNAH14Q0VDD8 3507 aa12.98□□□□□ -0.33
MSH5-202ENST00000375740 A0A1W2PQL4 384 aaPredicted RBP12.97□□□□□ -0.33
MSH5-202ENST00000375740 I3L521 148 aa12.97□□□□□ -0.33
MSH5-202ENST00000375740 LRRTM2O43300 516 aa12.97□□□□□ -0.33
MSH5-202ENST00000375740 SCG5P05408 212 aa12.97□□□□□ -0.33
MSH5-202ENST00000375740 ST6GAL1P15907 406 aa12.97□□□□□ -0.33
MSH5-202ENST00000375740 CRYBB2P43320 205 aa12.97□□□□□ -0.33
MSH5-202ENST00000375740 ZNF267Q14586 743 aaPredicted RBP12.97□□□□□ -0.33
MSH5-202ENST00000375740 EXOSC7Q15024 291 aaKnown RBP12.97□□□□□ -0.33
MSH5-202ENST00000375740 MAPK14Q16539 360 aa12.97□□□□□ -0.33
MSH5-202ENST00000375740 DECR1Q16698 335 aa12.97□□□□□ -0.33
MSH5-202ENST00000375740 FLYWCH1Q4VC44 716 aa12.97□□□□□ -0.33
MSH5-202ENST00000375740 RASSF6Q6ZTQ3 369 aa12.97□□□□□ -0.33
MSH5-202ENST00000375740 LSRQ86X29 649 aaPredicted RBP12.97□□□□□ -0.33
MSH5-202ENST00000375740 TIGD4Q8IY51 512 aa12.97□□□□□ -0.33
MSH5-202ENST00000375740 FAM160A2Q8N612 972 aaPredicted RBP12.97□□□□□ -0.33
MSH5-202ENST00000375740 OR52I1Q8NGK6 324 aa12.97□□□□□ -0.33
MSH5-202ENST00000375740 ZDHHC1Q8WTX9 485 aa12.97□□□□□ -0.33
MSH5-202ENST00000375740 RLN3Q8WXF3 142 aa12.97□□□□□ -0.33
MSH5-202ENST00000375740 ACOT11Q8WXI4 607 aaPredicted RBP12.97□□□□□ -0.33
MSH5-202ENST00000375740 CCDC3Q9BQI4 270 aa12.97□□□□□ -0.33
MSH5-202ENST00000375740 GALNT9Q9HCQ5 603 aa12.97□□□□□ -0.33
MSH5-202ENST00000375740 NLKQ9UBE8 527 aa12.97□□□□□ -0.33
MSH5-202ENST00000375740 KLHL21Q9UJP4 597 aa12.97□□□□□ -0.33
MSH5-202ENST00000375740 GPR52Q9Y2T5 361 aa12.97□□□□□ -0.33
MSH5-202ENST00000375740 H3BUI4 141 aa12.97□□□□□ -0.33
MSH5-202ENST00000375740 CT62P0C5K7 136 aa12.97□□□□□ -0.33
MSH5-202ENST00000375740 APEX1P27695 318 aaKnown RBP12.97□□□□□ -0.33
MSH5-202ENST00000375740 EEF1A1P68104 462 aaKnown RBP12.97□□□□□ -0.33
MSH5-202ENST00000375740 DUSP8Q13202 625 aa12.97□□□□□ -0.33
MSH5-202ENST00000375740 PRICKLE4Q2TBC4 344 aa12.97□□□□□ -0.33
MSH5-202ENST00000375740 DEFB110Q30KQ9 67 aa12.97□□□□□ -0.33
MSH5-202ENST00000375740 PYDC2Q56P42 97 aa12.97□□□□□ -0.33
MSH5-202ENST00000375740 CLEC12AQ5QGZ9 265 aa12.97□□□□□ -0.33
MSH5-202ENST00000375740 PDZK1Q5T2W1 519 aa12.97□□□□□ -0.33
MSH5-202ENST00000375740 ARMC6Q6NXE6 501 aa12.97□□□□□ -0.33
MSH5-202ENST00000375740 TMEM255BQ8WV15 326 aa12.97□□□□□ -0.33
MSH5-202ENST00000375740 KLHDC7BQ96G42 594 aa12.97□□□□□ -0.33
MSH5-202ENST00000375740 MND1Q9BWT6 205 aa12.97□□□□□ -0.33
MSH5-202ENST00000375740 MALT1Q9UDY8 824 aa12.97□□□□□ -0.33
MSH5-202ENST00000375740 TESQ9UGI8 421 aaKnown RBP12.97□□□□□ -0.33
MSH5-202ENST00000375740 CLCA2Q9UQC9 943 aa12.97□□□□□ -0.33
MSH5-202ENST00000375740 A0A087WV62 115 aa12.96□□□□□ -0.33
MSH5-202ENST00000375740 SLC35F4A4IF30 521 aa12.96□□□□□ -0.33
MSH5-202ENST00000375740 PLOD3O60568 738 aa12.96□□□□□ -0.33
MSH5-202ENST00000375740 CDRT1O95170 752 aa12.96□□□□□ -0.33
MSH5-202ENST00000375740 OR5F1O95221 314 aa12.96□□□□□ -0.33
MSH5-202ENST00000375740 HBQ1P09105 142 aa12.96□□□□□ -0.33
MSH5-202ENST00000375740 ICAM2P13598 275 aa12.96□□□□□ -0.33
MSH5-202ENST00000375740 RNF144AP50876 292 aaPredicted RBP12.96□□□□□ -0.33
MSH5-202ENST00000375740 BNC1Q01954 994 aa12.96□□□□□ -0.33
MSH5-202ENST00000375740 MGAT2Q10469 447 aa12.96□□□□□ -0.33
MSH5-202ENST00000375740 TIMM50Q3ZCQ8 353 aa12.96□□□□□ -0.33
MSH5-202ENST00000375740 DCST2Q5T1A1 773 aa12.96□□□□□ -0.33
MSH5-202ENST00000375740 RNLSQ5VYX0 342 aa12.96□□□□□ -0.33
MSH5-202ENST00000375740 PLET1Q6UQ28 207 aa12.96□□□□□ -0.33
MSH5-202ENST00000375740 KCTD20Q7Z5Y7 419 aa12.96□□□□□ -0.33
MSH5-202ENST00000375740 MRGPREQ86SM8 312 aa12.96□□□□□ -0.33
MSH5-202ENST00000375740 NRMQ8IXM6 262 aa12.96□□□□□ -0.33
MSH5-202ENST00000375740 PROKR2Q8NFJ6 384 aa12.96□□□□□ -0.33
MSH5-202ENST00000375740 TMEM163Q8TC26 289 aa12.96□□□□□ -0.33
MSH5-202ENST00000375740 ANKRD9Q96BM1 317 aaPredicted RBP12.96□□□□□ -0.33
MSH5-202ENST00000375740 UPRTQ96BW1 309 aa12.96□□□□□ -0.33
MSH5-202ENST00000375740 ZNF350Q9GZX5 532 aa12.96□□□□□ -0.33
MSH5-202ENST00000375740 NIPAL2Q9H841 368 aa12.96□□□□□ -0.33
MSH5-202ENST00000375740 GPR27Q9NS67 375 aa12.96□□□□□ -0.33
MSH5-202ENST00000375740 B3GNT2Q9NY97 397 aa12.96□□□□□ -0.33
MSH5-202ENST00000375740 NUP50Q9UKX7 468 aa12.96□□□□□ -0.33
MSH5-202ENST00000375740 SLC7A7Q9UM01 511 aa12.96□□□□□ -0.33
MSH5-202ENST00000375740 EYSQ5T1H1 3165 aa12.96□□□□□ -0.33
MSH5-202ENST00000375740 NPIPA5A0A0B4J1W7 369 aa12.96□□□□□ -0.33
MSH5-202ENST00000375740 A0A1W2PPC4 97 aa12.96□□□□□ -0.33
MSH5-202ENST00000375740 B4DGG1 531 aa12.96□□□□□ -0.33
MSH5-202ENST00000375740 NPIPA7E9PJI5 369 aa12.96□□□□□ -0.33
MSH5-202ENST00000375740 PIP5K1CO60331 668 aa12.96□□□□□ -0.33
MSH5-202ENST00000375740 UBXN7O94888 489 aa12.96□□□□□ -0.33
MSH5-202ENST00000375740 TSPAN19P0C672 248 aa12.96□□□□□ -0.33
MSH5-202ENST00000375740 NPIPA8P0DM63 369 aa12.96□□□□□ -0.33
MSH5-202ENST00000375740 PTNP21246 168 aa12.96□□□□□ -0.33
MSH5-202ENST00000375740 IGFBP4P22692 258 aa12.96□□□□□ -0.33
MSH5-202ENST00000375740 GPR4P46093 362 aa12.96□□□□□ -0.33
MSH5-202ENST00000375740 ZNF136P52737 540 aa12.96□□□□□ -0.33
MSH5-202ENST00000375740 EXOSC6Q5RKV6 272 aaKnown RBP12.96□□□□□ -0.33
MSH5-202ENST00000375740 TMEM65Q6PI78 240 aa12.96□□□□□ -0.33
MSH5-202ENST00000375740 TDHQ8IZJ6 230 aa12.96□□□□□ -0.33
MSH5-202ENST00000375740 OR8H3Q8N146 312 aa12.96□□□□□ -0.33
MSH5-202ENST00000375740 ZNF619Q8N2I2 560 aa12.96□□□□□ -0.33
MSH5-202ENST00000375740 CDRT4Q8N9R6 151 aa12.96□□□□□ -0.33
MSH5-202ENST00000375740 ATP6V1C2Q8NEY4 427 aa12.96□□□□□ -0.33
MSH5-202ENST00000375740 OR9A4Q8NGU2 314 aa12.96□□□□□ -0.33
MSH5-202ENST00000375740 MSANTD3Q96H12 275 aa12.96□□□□□ -0.33
MSH5-202ENST00000375740 WDFY2Q96P53 400 aa12.96□□□□□ -0.33
MSH5-202ENST00000375740 POLR2J2Q9GZM3 115 aaKnown RBP12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms