RNA–Protein interactions for RNA: ENST00000375274.6

PTCH1-203, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 4,720 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-203ENST00000375274 FZD7O75084 574 aa10.82□□□□□ -0.68
PTCH1-203ENST00000375274 PGFP49763 221 aa10.82□□□□□ -0.68
PTCH1-203ENST00000375274 SF3B4Q15427 424 aaKnown RBP eCLIP10.82□□□□□ -0.68
PTCH1-203ENST00000375274 MFSD8Q8NHS3 518 aa10.82□□□□□ -0.68
PTCH1-203ENST00000375274 NEURL3Q96EH8 262 aa10.82□□□□□ -0.68
PTCH1-203ENST00000375274 ZNF582Q96NG8 517 aaPredicted RBP10.82□□□□□ -0.68
PTCH1-203ENST00000375274 NOX3Q9HBY0 568 aa10.82□□□□□ -0.68
PTCH1-203ENST00000375274 MED17Q9NVC6 651 aa10.82□□□□□ -0.68
PTCH1-203ENST00000375274 ATXN7L1Q9ULK2 861 aaPredicted RBP10.82□□□□□ -0.68
PTCH1-203ENST00000375274 NUPL2O15504 423 aaKnown RBP10.81□□□□□ -0.68
PTCH1-203ENST00000375274 LDB3O75112 727 aa10.81□□□□□ -0.68
PTCH1-203ENST00000375274 CSF1P09603 554 aa10.81□□□□□ -0.68
PTCH1-203ENST00000375274 CLEC2LP0C7M8 214 aa10.81□□□□□ -0.68
PTCH1-203ENST00000375274 ZNF14P17017 642 aaPredicted RBP10.81□□□□□ -0.68
PTCH1-203ENST00000375274 RORAP35398 523 aa10.81□□□□□ -0.68
PTCH1-203ENST00000375274 RPS19P39019 145 aaKnown RBP10.81□□□□□ -0.68
PTCH1-203ENST00000375274 KCNJ5P48544 419 aa10.81□□□□□ -0.68
PTCH1-203ENST00000375274 ARRB1P49407 418 aaPredicted RBP10.81□□□□□ -0.68
PTCH1-203ENST00000375274 RGS19P49795 217 aa10.81□□□□□ -0.68
PTCH1-203ENST00000375274 ERVK-25P63136 954 aa10.81□□□□□ -0.68
PTCH1-203ENST00000375274 GALK2Q01415 458 aa10.81□□□□□ -0.68
PTCH1-203ENST00000375274 CBFBQ13951 182 aa10.81□□□□□ -0.68
PTCH1-203ENST00000375274 RHEBQ15382 184 aa10.81□□□□□ -0.68
PTCH1-203ENST00000375274 HBMQ6B0K9 141 aa10.81□□□□□ -0.68
PTCH1-203ENST00000375274 BCDIN3DQ7Z5W3 292 aaKnown RBP10.81□□□□□ -0.68
PTCH1-203ENST00000375274 TMEM150AQ86TG1 271 aa10.81□□□□□ -0.68
PTCH1-203ENST00000375274 TGM7Q96PF1 710 aa10.81□□□□□ -0.68
PTCH1-203ENST00000375274 ZIC5Q96T25 663 aa10.81□□□□□ -0.68
PTCH1-203ENST00000375274 SAV1Q9H4B6 383 aaPredicted RBP10.81□□□□□ -0.68
PTCH1-203ENST00000375274 SIAEQ9HAT2 523 aa10.81□□□□□ -0.68
PTCH1-203ENST00000375274 ADAM29Q9UKF5 820 aa10.81□□□□□ -0.68
PTCH1-203ENST00000375274 N4BP2Q86UW6 1770 aaPredicted RBP10.81□□□□□ -0.68
PTCH1-203ENST00000375274 RAD1O60671 282 aa10.81□□□□□ -0.68
PTCH1-203ENST00000375274 JUNDP17535 347 aa10.81□□□□□ -0.68
PTCH1-203ENST00000375274 DUSP7Q16829 419 aa10.81□□□□□ -0.68
PTCH1-203ENST00000375274 CFAP77Q6ZQR2 320 aa10.81□□□□□ -0.68
PTCH1-203ENST00000375274 SLC35B4Q969S0 331 aa10.81□□□□□ -0.68
PTCH1-203ENST00000375274 ALOXE3Q9BYJ1 711 aa10.81□□□□□ -0.68
PTCH1-203ENST00000375274 RGCCQ9H4X1 137 aa10.81□□□□□ -0.68
PTCH1-203ENST00000375274 C19orf25Q9UFG5 118 aaPredicted RBP10.81□□□□□ -0.68
PTCH1-203ENST00000375274 APOBEC3BQ9UH17 382 aaKnown RBP10.81□□□□□ -0.68
PTCH1-203ENST00000375274 KLK3P07288 261 aaPredicted RBP10.81□□□□□ -0.68
PTCH1-203ENST00000375274 RBMS1P29558 406 aaKnown RBP10.81□□□□□ -0.68
PTCH1-203ENST00000375274 BMPR1AP36894 532 aa10.81□□□□□ -0.68
PTCH1-203ENST00000375274 AQP2P41181 271 aa10.81□□□□□ -0.68
PTCH1-203ENST00000375274 HSD11B2P80365 405 aa10.81□□□□□ -0.68
PTCH1-203ENST00000375274 HHEXQ03014 270 aa10.81□□□□□ -0.68
PTCH1-203ENST00000375274 GAB1Q13480 694 aa10.81□□□□□ -0.68
PTCH1-203ENST00000375274 ZNF322Q6U7Q0 402 aaPredicted RBP10.81□□□□□ -0.68
PTCH1-203ENST00000375274 RASGRP3Q8IV61 690 aa10.81□□□□□ -0.68
PTCH1-203ENST00000375274 LILRA3Q8N6C8 439 aaPredicted RBP10.81□□□□□ -0.68
PTCH1-203ENST00000375274 DYNC2LI1Q8TCX1 351 aa10.81□□□□□ -0.68
PTCH1-203ENST00000375274 CHTF18Q8WVB6 975 aa10.81□□□□□ -0.68
PTCH1-203ENST00000375274 ZNF587Q96SQ5 575 aaPredicted RBP10.81□□□□□ -0.68
PTCH1-203ENST00000375274 ZNF436Q9C0F3 470 aaPredicted RBP10.81□□□□□ -0.68
PTCH1-203ENST00000375274 SFXN1Q9H9B4 322 aa10.81□□□□□ -0.68
PTCH1-203ENST00000375274 ABI3Q9P2A4 366 aa10.81□□□□□ -0.68
PTCH1-203ENST00000375274 HMGB3O15347 200 aaKnown RBP10.8□□□□□ -0.68
PTCH1-203ENST00000375274 CYCSP99999 105 aaKnown RBP10.8□□□□□ -0.68
PTCH1-203ENST00000375274 FAPQ12884 760 aa10.8□□□□□ -0.68
PTCH1-203ENST00000375274 GNMTQ14749 295 aa10.8□□□□□ -0.68
PTCH1-203ENST00000375274 OR1Q1Q15612 314 aa10.8□□□□□ -0.68
PTCH1-203ENST00000375274 ZNF761Q86XN6 746 aaPredicted RBP10.8□□□□□ -0.68
PTCH1-203ENST00000375274 OR6T1Q8NGN1 323 aa10.8□□□□□ -0.68
PTCH1-203ENST00000375274 ADAMTS18Q8TE60 1221 aa10.8□□□□□ -0.68
PTCH1-203ENST00000375274 SLC7A6Q92536 515 aa10.8□□□□□ -0.68
PTCH1-203ENST00000375274 C16orf58Q96GQ5 468 aa10.8□□□□□ -0.68
PTCH1-203ENST00000375274 PGAM5Q96HS1 289 aa10.8□□□□□ -0.68
PTCH1-203ENST00000375274 DHRS1Q96LJ7 313 aa10.8□□□□□ -0.68
PTCH1-203ENST00000375274 PHB2Q99623 299 aa10.8□□□□□ -0.68
PTCH1-203ENST00000375274 TMEM121BQ9BXQ6 578 aaPredicted RBP10.8□□□□□ -0.68
PTCH1-203ENST00000375274 SLC5A7Q9GZV3 580 aa10.8□□□□□ -0.68
PTCH1-203ENST00000375274 METTL17Q9H7H0 456 aaPredicted RBP10.8□□□□□ -0.68
PTCH1-203ENST00000375274 DZANK1Q9NVP4 752 aa10.8□□□□□ -0.68
PTCH1-203ENST00000375274 ZNF443Q9Y2A4 671 aaPredicted RBP10.8□□□□□ -0.68
PTCH1-203ENST00000375274 A0A1B0GTL3 188 aa10.8□□□□□ -0.68
PTCH1-203ENST00000375274 TVP23AA6NH52 213 aa10.8□□□□□ -0.68
PTCH1-203ENST00000375274 ZNF736B4DX44 427 aaPredicted RBP10.8□□□□□ -0.68
PTCH1-203ENST00000375274 FABP7O15540 132 aa10.8□□□□□ -0.68
PTCH1-203ENST00000375274 GPRIN2O60269 458 aa10.8□□□□□ -0.68
PTCH1-203ENST00000375274 SLCO2B1O94956 709 aa10.8□□□□□ -0.68
PTCH1-203ENST00000375274 FARS2O95363 451 aaKnown RBP10.8□□□□□ -0.68
PTCH1-203ENST00000375274 PNMTP11086 282 aa10.8□□□□□ -0.68
PTCH1-203ENST00000375274 NPR2P20594 1047 aa10.8□□□□□ -0.68
PTCH1-203ENST00000375274 HOXC12P31275 282 aa10.8□□□□□ -0.68
PTCH1-203ENST00000375274 RAB5BP61020 215 aa10.8□□□□□ -0.68
PTCH1-203ENST00000375274 KCNJ10P78508 379 aa10.8□□□□□ -0.68
PTCH1-203ENST00000375274 ZNF616Q08AN1 781 aa10.8□□□□□ -0.68
PTCH1-203ENST00000375274 CCINQ13939 588 aa10.8□□□□□ -0.68
PTCH1-203ENST00000375274 GK2Q14410 553 aaPredicted RBP10.8□□□□□ -0.68
PTCH1-203ENST00000375274 KIR2DS3Q14952 304 aa10.8□□□□□ -0.68
PTCH1-203ENST00000375274 CCSMST1Q4G0I0 132 aa10.8□□□□□ -0.68
PTCH1-203ENST00000375274 ARSKQ6UWY0 536 aa10.8□□□□□ -0.68
PTCH1-203ENST00000375274 TANKQ92844 425 aa10.8□□□□□ -0.68
PTCH1-203ENST00000375274 PITX2Q99697 317 aa10.8□□□□□ -0.68
PTCH1-203ENST00000375274 WDR77Q9BQA1 342 aaPredicted RBP10.8□□□□□ -0.68
PTCH1-203ENST00000375274 RLIMQ9NVW2 624 aa10.8□□□□□ -0.68
PTCH1-203ENST00000375274 KCMF1Q9P0J7 381 aa10.8□□□□□ -0.68
PTCH1-203ENST00000375274 OSGIN1Q9UJX0 560 aa10.8□□□□□ -0.68
PTCH1-203ENST00000375274 ENTPD2Q9Y5L3 495 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 141.3 ms