RNA–Protein interactions for RNA: ENST00000374943.8

HLA-DQB1-201, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,656 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-201ENST00000374943 SURF4O15260 269 aa16.58■□□□□ 0.24
HLA-DQB1-201ENST00000374943 CFIP05156 583 aa16.58■□□□□ 0.24
HLA-DQB1-201ENST00000374943 IFI30P13284 250 aa16.58■□□□□ 0.24
HLA-DQB1-201ENST00000374943 MAKP20794 623 aa16.58■□□□□ 0.24
HLA-DQB1-201ENST00000374943 CLPPQ16740 277 aaPredicted RBP16.58■□□□□ 0.24
HLA-DQB1-201ENST00000374943 VWA2Q5GFL6 755 aa16.58■□□□□ 0.24
HLA-DQB1-201ENST00000374943 C1orf189Q5VU69 101 aa16.58■□□□□ 0.24
HLA-DQB1-201ENST00000374943 LINC00114Q6XXX2 140 aa16.58■□□□□ 0.24
HLA-DQB1-201ENST00000374943 COX15Q7KZN9 410 aa16.58■□□□□ 0.24
HLA-DQB1-201ENST00000374943 OR2T33Q8NG76 320 aa16.58■□□□□ 0.24
HLA-DQB1-201ENST00000374943 PFN4Q8NHR9 129 aa16.58■□□□□ 0.24
HLA-DQB1-201ENST00000374943 TBC1D15Q8TC07 691 aa16.58■□□□□ 0.24
HLA-DQB1-201ENST00000374943 DAZLQ92904 295 aaKnown RBP16.58■□□□□ 0.24
HLA-DQB1-201ENST00000374943 ADIPOR1Q96A54 375 aa16.58■□□□□ 0.24
HLA-DQB1-201ENST00000374943 LCORQ96JN0 433 aaPredicted RBP16.58■□□□□ 0.24
HLA-DQB1-201ENST00000374943 OR8D2Q9GZM6 311 aa16.58■□□□□ 0.24
HLA-DQB1-201ENST00000374943 VN1R1Q9GZP7 353 aa16.58■□□□□ 0.24
HLA-DQB1-201ENST00000374943 C20orf141Q9NUB4 165 aa16.58■□□□□ 0.24
HLA-DQB1-201ENST00000374943 DIMT1Q9UNQ2 313 aaKnown RBP16.58■□□□□ 0.24
HLA-DQB1-201ENST00000374943 LSM2Q9Y333 95 aaKnown RBP16.58■□□□□ 0.24
HLA-DQB1-201ENST00000374943 IGHV5-10-1A0A0J9YXX1 117 aa16.57■□□□□ 0.24
HLA-DQB1-201ENST00000374943 HMGN1P05114 100 aa16.57■□□□□ 0.24
HLA-DQB1-201ENST00000374943 NR4A1P22736 598 aa16.57■□□□□ 0.24
HLA-DQB1-201ENST00000374943 OCA2Q04671 838 aa16.57■□□□□ 0.24
HLA-DQB1-201ENST00000374943 CLEC12AQ5QGZ9 265 aa16.57■□□□□ 0.24
HLA-DQB1-201ENST00000374943 FNDC7Q5VTL7 733 aa16.57■□□□□ 0.24
HLA-DQB1-201ENST00000374943 SLC30A6Q6NXT4 461 aa16.57■□□□□ 0.24
HLA-DQB1-201ENST00000374943 BCDIN3DQ7Z5W3 292 aaKnown RBP16.57■□□□□ 0.24
HLA-DQB1-201ENST00000374943 CDK20Q8IZL9 346 aa16.57■□□□□ 0.24
HLA-DQB1-201ENST00000374943 OR4C3Q8NH37 302 aa16.57■□□□□ 0.24
HLA-DQB1-201ENST00000374943 BPIFA2Q96DR5 249 aa16.57■□□□□ 0.24
HLA-DQB1-201ENST00000374943 DPH1Q9BZG8 443 aa16.57■□□□□ 0.24
HLA-DQB1-201ENST00000374943 NXF5Q9H1B4 397 aaKnown RBP16.57■□□□□ 0.24
HLA-DQB1-201ENST00000374943 TAS2R16Q9NYV7 291 aa16.57■□□□□ 0.24
HLA-DQB1-201ENST00000374943 MRTO4Q9UKD2 239 aaKnown RBP16.57■□□□□ 0.24
HLA-DQB1-201ENST00000374943 FBXO4Q9UKT5 387 aa16.57■□□□□ 0.24
HLA-DQB1-201ENST00000374943 A8MUA0 341 aa16.56■□□□□ 0.24
HLA-DQB1-201ENST00000374943 CER1O95813 267 aa16.56■□□□□ 0.24
HLA-DQB1-201ENST00000374943 CSTAP01040 98 aa16.56■□□□□ 0.24
HLA-DQB1-201ENST00000374943 GRK5P34947 590 aa16.56■□□□□ 0.24
HLA-DQB1-201ENST00000374943 GAS1P54826 345 aa16.56■□□□□ 0.24
HLA-DQB1-201ENST00000374943 EBPQ15125 230 aaKnown RBP16.56■□□□□ 0.24
HLA-DQB1-201ENST00000374943 NSDHLQ15738 373 aa16.56■□□□□ 0.24
HLA-DQB1-201ENST00000374943 KLHL22Q53GT1 634 aa16.56■□□□□ 0.24
HLA-DQB1-201ENST00000374943 ARMCX4Q5H9R4 360 aa16.56■□□□□ 0.24
HLA-DQB1-201ENST00000374943 ULK3Q6PHR2 472 aa16.56■□□□□ 0.24
HLA-DQB1-201ENST00000374943 SLC43A2Q8N370 569 aa16.56■□□□□ 0.24
HLA-DQB1-201ENST00000374943 EID2Q8N6I1 236 aa16.56■□□□□ 0.24
HLA-DQB1-201ENST00000374943 ZNF527Q8NB42 609 aa16.56■□□□□ 0.24
HLA-DQB1-201ENST00000374943 ANKK1Q8NFD2 765 aa16.56■□□□□ 0.24
HLA-DQB1-201ENST00000374943 FANK1Q8TC84 345 aa16.56■□□□□ 0.24
HLA-DQB1-201ENST00000374943 GRHL3Q8TE85 626 aa16.56■□□□□ 0.24
HLA-DQB1-201ENST00000374943 SAMD8Q96LT4 415 aa16.56■□□□□ 0.24
HLA-DQB1-201ENST00000374943 NUDT9Q9BW91 350 aa16.56■□□□□ 0.24
HLA-DQB1-201ENST00000374943 OR52D1Q9H346 318 aa16.56■□□□□ 0.24
HLA-DQB1-201ENST00000374943 HHATLQ9HCP6 504 aa16.56■□□□□ 0.24
HLA-DQB1-201ENST00000374943 FGF20Q9NP95 211 aaPredicted RBP16.56■□□□□ 0.24
HLA-DQB1-201ENST00000374943 MEPEQ9NQ76 525 aaPredicted RBP16.56■□□□□ 0.24
HLA-DQB1-201ENST00000374943 UBQLN4Q9NRR5 601 aa16.56■□□□□ 0.24
HLA-DQB1-201ENST00000374943 SLC22A11Q9NSA0 550 aa16.56■□□□□ 0.24
HLA-DQB1-201ENST00000374943 OR6C76A6NM76 312 aa16.56■□□□□ 0.24
HLA-DQB1-201ENST00000374943 TO15178 435 aa16.56■□□□□ 0.24
HLA-DQB1-201ENST00000374943 CLPXO76031 633 aa16.56■□□□□ 0.24
HLA-DQB1-201ENST00000374943 RCBTB2O95199 551 aa16.56■□□□□ 0.24
HLA-DQB1-201ENST00000374943 RAB36O95755 333 aa16.56■□□□□ 0.24
HLA-DQB1-201ENST00000374943 ONECUT2O95948 504 aa16.56■□□□□ 0.24
HLA-DQB1-201ENST00000374943 ZGLP1P0C6A0 271 aa16.56■□□□□ 0.24
HLA-DQB1-201ENST00000374943 CKMT1AP12532 417 aa16.56■□□□□ 0.24
HLA-DQB1-201ENST00000374943 TBXA2RP21731 343 aa16.56■□□□□ 0.24
HLA-DQB1-201ENST00000374943 FXYD6P3P58550 94 aa16.56■□□□□ 0.24
HLA-DQB1-201ENST00000374943 RAB40BQ12829 278 aa16.56■□□□□ 0.24
HLA-DQB1-201ENST00000374943 ALG10BQ5I7T1 473 aa16.56■□□□□ 0.24
HLA-DQB1-201ENST00000374943 AADACL4Q5VUY2 407 aa16.56■□□□□ 0.24
HLA-DQB1-201ENST00000374943 C19orf48Q6RUI8 117 aa16.56■□□□□ 0.24
HLA-DQB1-201ENST00000374943 BMP8AQ7Z5Y6 402 aa16.56■□□□□ 0.24
HLA-DQB1-201ENST00000374943 PROKR2Q8NFJ6 384 aa16.56■□□□□ 0.24
HLA-DQB1-201ENST00000374943 OR52L1Q8NGH7 329 aa16.56■□□□□ 0.24
HLA-DQB1-201ENST00000374943 OR52I1Q8NGK6 324 aa16.56■□□□□ 0.24
HLA-DQB1-201ENST00000374943 EFHD2Q96C19 240 aaPredicted RBP16.56■□□□□ 0.24
HLA-DQB1-201ENST00000374943 LMF1Q96S06 567 aa16.56■□□□□ 0.24
HLA-DQB1-201ENST00000374943 CCNL2Q96S94 520 aaPredicted RBP16.56■□□□□ 0.24
HLA-DQB1-201ENST00000374943 MND1Q9BWT6 205 aa16.56■□□□□ 0.24
HLA-DQB1-201ENST00000374943 UBQLN3Q9H347 655 aa16.56■□□□□ 0.24
HLA-DQB1-201ENST00000374943 ATP13A2Q9NQ11 1180 aa16.56■□□□□ 0.24
HLA-DQB1-201ENST00000374943 EXOSC3Q9NQT5 275 aaKnown RBP16.56■□□□□ 0.24
HLA-DQB1-201ENST00000374943 CTSFQ9UBX1 484 aa16.56■□□□□ 0.24
HLA-DQB1-201ENST00000374943 MKL2Q9ULH7 1088 aa16.56■□□□□ 0.24
HLA-DQB1-201ENST00000374943 ERGIC3Q9Y282 383 aa16.56■□□□□ 0.24
HLA-DQB1-201ENST00000374943 MUC6Q6W4X9 2439 aa16.55■□□□□ 0.24
HLA-DQB1-201ENST00000374943 MPDZO75970 2070 aa16.55■□□□□ 0.24
HLA-DQB1-201ENST00000374943 ZDBF2Q9HCK1 2354 aa16.55■□□□□ 0.24
HLA-DQB1-201ENST00000374943 PRR33A8MZF0 331 aa16.55■□□□□ 0.24
HLA-DQB1-201ENST00000374943 RGS6P49758 472 aa16.55■□□□□ 0.24
HLA-DQB1-201ENST00000374943 C3orf38Q5JPI3 329 aa16.55■□□□□ 0.24
HLA-DQB1-201ENST00000374943 SLC23A3Q6PIS1 610 aa16.55■□□□□ 0.24
HLA-DQB1-201ENST00000374943 KIRREL2Q6UWL6 708 aa16.55■□□□□ 0.24
HLA-DQB1-201ENST00000374943 LINC00299Q6ZSB3 139 aa16.55■□□□□ 0.24
HLA-DQB1-201ENST00000374943 OR1N1Q8NGS0 311 aa16.55■□□□□ 0.24
HLA-DQB1-201ENST00000374943 RNF217Q8TC41 542 aa16.55■□□□□ 0.24
HLA-DQB1-201ENST00000374943 DNAJA4Q8WW22 397 aaPredicted RBP16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 488.9 ms