RNA–Protein interactions for RNA: ENST00000374676.4

HSPG2-202, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 3

Gene HSPG2, Length 411 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-202ENST00000374676 ALG2Q9H553 416 aa10.32□□□□□ -0.76
HSPG2-202ENST00000374676 ADA2Q9NZK5 511 aa10.32□□□□□ -0.76
HSPG2-202ENST00000374676 USP22Q9UPT9 525 aa10.32□□□□□ -0.76
HSPG2-202ENST00000374676 ZNF443Q9Y2A4 671 aaPredicted RBP10.32□□□□□ -0.76
HSPG2-202ENST00000374676 CHST2Q9Y4C5 530 aa10.32□□□□□ -0.76
HSPG2-202ENST00000374676 DIDO1Q9BTC0 2240 aaKnown RBP10.31□□□□□ -0.76
HSPG2-202ENST00000374676 TRGV5A0A0B4J1U4 118 aa10.31□□□□□ -0.76
HSPG2-202ENST00000374676 C7orf72A4D263 438 aa10.31□□□□□ -0.76
HSPG2-202ENST00000374676 OR14I1A6ND48 311 aa10.31□□□□□ -0.76
HSPG2-202ENST00000374676 CLDN24A6NM45 220 aa10.31□□□□□ -0.76
HSPG2-202ENST00000374676 LINC01387J3KSC0 135 aa10.31□□□□□ -0.76
HSPG2-202ENST00000374676 ETV2O00321 342 aaPredicted RBP10.31□□□□□ -0.76
HSPG2-202ENST00000374676 FAAHO00519 579 aa10.31□□□□□ -0.76
HSPG2-202ENST00000374676 AQP7O14520 342 aa10.31□□□□□ -0.76
HSPG2-202ENST00000374676 LINGO3P0C6S8 592 aa10.31□□□□□ -0.76
HSPG2-202ENST00000374676 UBTFL6P0CB48 400 aaPredicted RBP10.31□□□□□ -0.76
HSPG2-202ENST00000374676 HSD17B1P14061 328 aa10.31□□□□□ -0.76
HSPG2-202ENST00000374676 HK1P19367 917 aa10.31□□□□□ -0.76
HSPG2-202ENST00000374676 PGCP20142 388 aa10.31□□□□□ -0.76
HSPG2-202ENST00000374676 AQP1P29972 269 aa10.31□□□□□ -0.76
HSPG2-202ENST00000374676 KDELR2P33947 212 aa10.31□□□□□ -0.76
HSPG2-202ENST00000374676 SLC6A8P48029 635 aa10.31□□□□□ -0.76
HSPG2-202ENST00000374676 RNF144AP50876 292 aaPredicted RBP10.31□□□□□ -0.76
HSPG2-202ENST00000374676 DLX5P56178 289 aa10.31□□□□□ -0.76
HSPG2-202ENST00000374676 DMTNQ08495 405 aa10.31□□□□□ -0.76
HSPG2-202ENST00000374676 BNIP1Q12981 228 aa10.31□□□□□ -0.76
HSPG2-202ENST00000374676 CBFBQ13951 182 aa10.31□□□□□ -0.76
HSPG2-202ENST00000374676 TOMM20Q15388 145 aa10.31□□□□□ -0.76
HSPG2-202ENST00000374676 FXNQ16595 210 aa10.31□□□□□ -0.76
HSPG2-202ENST00000374676 TMEM44Q2T9K0 475 aa10.31□□□□□ -0.76
HSPG2-202ENST00000374676 EIPR1Q53HC9 387 aa10.31□□□□□ -0.76
HSPG2-202ENST00000374676 NHSL2Q5HYW2 709 aa10.31□□□□□ -0.76
HSPG2-202ENST00000374676 MRPL2Q5T653 305 aaKnown RBP10.31□□□□□ -0.76
HSPG2-202ENST00000374676 GFRALQ6UXV0 394 aa10.31□□□□□ -0.76
HSPG2-202ENST00000374676 RINLQ6ZS11 566 aa10.31□□□□□ -0.76
HSPG2-202ENST00000374676 YRDCQ86U90 279 aaKnown RBP10.31□□□□□ -0.76
HSPG2-202ENST00000374676 ARMC8Q8IUR7 673 aa10.31□□□□□ -0.76
HSPG2-202ENST00000374676 CLIP4Q8N3C7 705 aa10.31□□□□□ -0.76
HSPG2-202ENST00000374676 TNIP2Q8NFZ5 429 aa10.31□□□□□ -0.76
HSPG2-202ENST00000374676 OR14L1PQ8NHC6 308 aa10.31□□□□□ -0.76
HSPG2-202ENST00000374676 RASSF5Q8WWW0 418 aa10.31□□□□□ -0.76
HSPG2-202ENST00000374676 ZBTB8AQ96BR9 441 aa10.31□□□□□ -0.76
HSPG2-202ENST00000374676 PINK1Q9BXM7 581 aa10.31□□□□□ -0.76
HSPG2-202ENST00000374676 LDAHQ9H6V9 325 aa10.31□□□□□ -0.76
HSPG2-202ENST00000374676 EVA1AQ9H8M9 152 aa10.31□□□□□ -0.76
HSPG2-202ENST00000374676 MED17Q9NVC6 651 aa10.31□□□□□ -0.76
HSPG2-202ENST00000374676 DNAJB12Q9NXW2 375 aaKnown RBP10.31□□□□□ -0.76
HSPG2-202ENST00000374676 TAS2R10Q9NYW0 307 aa10.31□□□□□ -0.76
HSPG2-202ENST00000374676 TAS2R1Q9NYW7 299 aa10.31□□□□□ -0.76
HSPG2-202ENST00000374676 GMPR2Q9P2T1 348 aaKnown RBP10.31□□□□□ -0.76
HSPG2-202ENST00000374676 CD300AQ9UGN4 299 aa10.31□□□□□ -0.76
HSPG2-202ENST00000374676 DKKL1Q9UK85 242 aa10.31□□□□□ -0.76
HSPG2-202ENST00000374676 LIPGQ9Y5X9 500 aa10.31□□□□□ -0.76
HSPG2-202ENST00000374676 A0A1B0GTH9 108 aa10.3□□□□□ -0.76
HSPG2-202ENST00000374676 FAM47E-STBD1D6RA91 191 aa10.3□□□□□ -0.76
HSPG2-202ENST00000374676 SYT5O00445 386 aa10.3□□□□□ -0.76
HSPG2-202ENST00000374676 TPST1O60507 370 aa10.3□□□□□ -0.76
HSPG2-202ENST00000374676 CDC40O60508 579 aaKnown RBP eCLIP10.3□□□□□ -0.76
HSPG2-202ENST00000374676 BCAS1O75363 584 aaPredicted RBP10.3□□□□□ -0.76
HSPG2-202ENST00000374676 CYP7B1O75881 506 aa10.3□□□□□ -0.76
HSPG2-202ENST00000374676 ATP5HO75947 161 aa10.3□□□□□ -0.76
HSPG2-202ENST00000374676 ACTL6AO96019 429 aa10.3□□□□□ -0.76
HSPG2-202ENST00000374676 IFNA14P01570 189 aa10.3□□□□□ -0.76
HSPG2-202ENST00000374676 C8BP07358 591 aa10.3□□□□□ -0.76
HSPG2-202ENST00000374676 CHMP24386 653 aa10.3□□□□□ -0.76
HSPG2-202ENST00000374676 ADH6P28332 368 aa10.3□□□□□ -0.76
HSPG2-202ENST00000374676 HTR1EP28566 365 aa10.3□□□□□ -0.76
HSPG2-202ENST00000374676 GCKP35557 465 aa10.3□□□□□ -0.76
HSPG2-202ENST00000374676 EIF1P41567 113 aaKnown RBP10.3□□□□□ -0.76
HSPG2-202ENST00000374676 KCNJ5P48544 419 aa10.3□□□□□ -0.76
HSPG2-202ENST00000374676 ZNF41P51814 821 aaPredicted RBP10.3□□□□□ -0.76
HSPG2-202ENST00000374676 GFRA1P56159 465 aa10.3□□□□□ -0.76
HSPG2-202ENST00000374676 B3GALT5-AS1P59052 145 aa10.3□□□□□ -0.76
HSPG2-202ENST00000374676 RBPJQ06330 500 aa10.3□□□□□ -0.76
HSPG2-202ENST00000374676 IGFBP7Q16270 282 aa10.3□□□□□ -0.76
HSPG2-202ENST00000374676 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10.3□□□□□ -0.76
HSPG2-202ENST00000374676 PLPPR5Q32ZL2 321 aa10.3□□□□□ -0.76
HSPG2-202ENST00000374676 NDUFAF6Q330K2 333 aa10.3□□□□□ -0.76
HSPG2-202ENST00000374676 SLC25A53Q5H9E4 307 aa10.3□□□□□ -0.76
HSPG2-202ENST00000374676 WIPI1Q5MNZ9 446 aaPredicted RBP10.3□□□□□ -0.76
HSPG2-202ENST00000374676 VASNQ6EMK4 673 aa10.3□□□□□ -0.76
HSPG2-202ENST00000374676 ARSKQ6UWY0 536 aa10.3□□□□□ -0.76
HSPG2-202ENST00000374676 ZNF550Q7Z398 422 aa10.3□□□□□ -0.76
HSPG2-202ENST00000374676 ATCAYQ86WG3 371 aa10.3□□□□□ -0.76
HSPG2-202ENST00000374676 GTPBP8Q8N3Z3 284 aaPredicted RBP10.3□□□□□ -0.76
HSPG2-202ENST00000374676 ST8SIA1Q92185 356 aa10.3□□□□□ -0.76
HSPG2-202ENST00000374676 TAMM41Q96BW9 452 aa10.3□□□□□ -0.76
HSPG2-202ENST00000374676 SARAFQ96BY9 339 aa10.3□□□□□ -0.76
HSPG2-202ENST00000374676 KCTD14Q9BQ13 255 aaPredicted RBP10.3□□□□□ -0.76
HSPG2-202ENST00000374676 KLHDC3Q9BQ90 382 aa10.3□□□□□ -0.76
HSPG2-202ENST00000374676 SLC6A15Q9H2J7 730 aa10.3□□□□□ -0.76
HSPG2-202ENST00000374676 RLIMQ9NVW2 624 aa10.3□□□□□ -0.76
HSPG2-202ENST00000374676 ZNF835Q9Y2P0 537 aa10.3□□□□□ -0.76
HSPG2-202ENST00000374676 USP9XQ93008 2570 aaPredicted RBP10.29□□□□□ -0.76
HSPG2-202ENST00000374676 MPDZO75970 2070 aa10.29□□□□□ -0.76
HSPG2-202ENST00000374676 LRRK2Q5S007 2527 aa10.29□□□□□ -0.76
HSPG2-202ENST00000374676 GCN1Q92616 2671 aaKnown RBP10.29□□□□□ -0.76
HSPG2-202ENST00000374676 TNFSF12-TNFSF13A0A0A6YY99 330 aa10.29□□□□□ -0.76
HSPG2-202ENST00000374676 OR2M5A3KFT3 312 aa10.29□□□□□ -0.76
HSPG2-202ENST00000374676 CFAP73A6NFT4 308 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms