RNA–Protein interactions for RNA: ENST00000373482.6

PBX3-202, Transcript of PBX homeobox 3, humanhuman

TSL 1 (best)

Gene PBX3, Length 1,130 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX3-202ENST00000373482 FAM57AQ8TBR7 257 aa16.62■□□□□ 0.25
PBX3-202ENST00000373482 ABTB1Q969K4 478 aaPredicted RBP16.62■□□□□ 0.25
PBX3-202ENST00000373482 ZBTB8AQ96BR9 441 aa16.62■□□□□ 0.25
PBX3-202ENST00000373482 PIGQQ9BRB3 760 aa16.62■□□□□ 0.25
PBX3-202ENST00000373482 EXOSC3Q9NQT5 275 aaKnown RBP16.62■□□□□ 0.25
PBX3-202ENST00000373482 NDE1Q9NXR1 346 aa16.62■□□□□ 0.25
PBX3-202ENST00000373482 GPC6Q9Y625 555 aaPredicted RBP16.62■□□□□ 0.25
PBX3-202ENST00000373482 DOCK7Q96N67 2140 aa16.61■□□□□ 0.25
PBX3-202ENST00000373482 TRGV8A0A0C4DH27 118 aa16.61■□□□□ 0.25
PBX3-202ENST00000373482 FAM220BPB1ANY3 271 aa16.61■□□□□ 0.25
PBX3-202ENST00000373482 LINC01387J3KSC0 135 aa16.61■□□□□ 0.25
PBX3-202ENST00000373482 OIP5O43482 229 aa16.61■□□□□ 0.25
PBX3-202ENST00000373482 PGCP20142 388 aa16.61■□□□□ 0.25
PBX3-202ENST00000373482 AQP1P29972 269 aa16.61■□□□□ 0.25
PBX3-202ENST00000373482 PCGF2P35227 344 aa16.61■□□□□ 0.25
PBX3-202ENST00000373482 SLC6A8P48029 635 aa16.61■□□□□ 0.25
PBX3-202ENST00000373482 GZMMP51124 257 aa16.61■□□□□ 0.25
PBX3-202ENST00000373482 PSME3P61289 254 aa16.61■□□□□ 0.25
PBX3-202ENST00000373482 RNF220Q5VTB9 566 aa16.61■□□□□ 0.25
PBX3-202ENST00000373482 VASNQ6EMK4 673 aa16.61■□□□□ 0.25
PBX3-202ENST00000373482 C8orf82Q6P1X6 216 aaPredicted RBP16.61■□□□□ 0.25
PBX3-202ENST00000373482 ARSKQ6UWY0 536 aa16.61■□□□□ 0.25
PBX3-202ENST00000373482 FGD2Q7Z6J4 655 aa16.61■□□□□ 0.25
PBX3-202ENST00000373482 CD163Q86VB7 1156 aa16.61■□□□□ 0.25
PBX3-202ENST00000373482 CALHM3Q86XJ0 350 aa16.61■□□□□ 0.25
PBX3-202ENST00000373482 CHERPQ8IWX8 916 aaKnown RBP16.61■□□□□ 0.25
PBX3-202ENST00000373482 ZNF440Q8IYI8 595 aa16.61■□□□□ 0.25
PBX3-202ENST00000373482 EID3Q8N140 333 aa16.61■□□□□ 0.25
PBX3-202ENST00000373482 FAM71CQ8NEG0 241 aa16.61■□□□□ 0.25
PBX3-202ENST00000373482 BHLHE22Q8NFJ8 381 aaPredicted RBP16.61■□□□□ 0.25
PBX3-202ENST00000373482 OR2T12Q8NG77 320 aa16.61■□□□□ 0.25
PBX3-202ENST00000373482 ARSGQ96EG1 525 aa16.61■□□□□ 0.25
PBX3-202ENST00000373482 REXO5Q96IC2 774 aaKnown RBP16.61■□□□□ 0.25
PBX3-202ENST00000373482 NSL1Q96IY1 281 aa16.61■□□□□ 0.25
PBX3-202ENST00000373482 ZNF583Q96ND8 569 aa16.61■□□□□ 0.25
PBX3-202ENST00000373482 MED17Q9NVC6 651 aa16.61■□□□□ 0.25
PBX3-202ENST00000373482 SPRR3Q9UBC9 169 aa16.61■□□□□ 0.25
PBX3-202ENST00000373482 STOML1Q9UBI4 398 aa16.61■□□□□ 0.25
PBX3-202ENST00000373482 MED12LQ86YW9 2145 aa16.6■□□□□ 0.25
PBX3-202ENST00000373482 PRORSD1PA6NEY8 169 aa16.6■□□□□ 0.25
PBX3-202ENST00000373482 CLDN24A6NM45 220 aa16.6■□□□□ 0.25
PBX3-202ENST00000373482 ZNHIT1O43257 154 aa16.6■□□□□ 0.25
PBX3-202ENST00000373482 STSP08842 583 aa16.6■□□□□ 0.25
PBX3-202ENST00000373482 ZNF17P17021 662 aa16.6■□□□□ 0.25
PBX3-202ENST00000373482 BMP7P18075 431 aa16.6■□□□□ 0.25
PBX3-202ENST00000373482 EIF1P41567 113 aaKnown RBP16.6■□□□□ 0.25
PBX3-202ENST00000373482 SLC7A2P52569 658 aa16.6■□□□□ 0.25
PBX3-202ENST00000373482 GFRA1P56159 465 aa16.6■□□□□ 0.25
PBX3-202ENST00000373482 CRYZQ08257 329 aaKnown RBP16.6■□□□□ 0.25
PBX3-202ENST00000373482 PLPPR5Q32ZL2 321 aa16.6■□□□□ 0.25
PBX3-202ENST00000373482 ZNF836Q6ZNA1 936 aa16.6■□□□□ 0.25
PBX3-202ENST00000373482 TRPM8Q7Z2W7 1104 aa16.6■□□□□ 0.25
PBX3-202ENST00000373482 PATL1Q86TB9 770 aaKnown RBP16.6■□□□□ 0.25
PBX3-202ENST00000373482 GRAMD2AQ8IUY3 354 aa16.6■□□□□ 0.25
PBX3-202ENST00000373482 SLC15A3Q8IY34 581 aa16.6■□□□□ 0.25
PBX3-202ENST00000373482 PM20D2Q8IYS1 436 aa16.6■□□□□ 0.25
PBX3-202ENST00000373482 GPR119Q8TDV5 335 aa16.6■□□□□ 0.25
PBX3-202ENST00000373482 TMEM234Q8WY98 164 aa16.6■□□□□ 0.25
PBX3-202ENST00000373482 UGT2B28Q9BY64 529 aa16.6■□□□□ 0.25
PBX3-202ENST00000373482 SPAG4Q9NPE6 437 aa16.6■□□□□ 0.25
PBX3-202ENST00000373482 CMTM6Q9NX76 183 aa16.6■□□□□ 0.25
PBX3-202ENST00000373482 DNAJB12Q9NXW2 375 aaKnown RBP16.6■□□□□ 0.25
PBX3-202ENST00000373482 TNFRSF10DQ9UBN6 386 aa16.6■□□□□ 0.25
PBX3-202ENST00000373482 SH3BGRL2Q9UJC5 107 aa16.6■□□□□ 0.25
PBX3-202ENST00000373482 A0A1B0GUH1 482 aa16.59■□□□□ 0.25
PBX3-202ENST00000373482 OR2M5A3KFT3 312 aa16.59■□□□□ 0.25
PBX3-202ENST00000373482 CDHR4A6H8M9 788 aa16.59■□□□□ 0.25
PBX3-202ENST00000373482 CCT8L1PA6NM43 557 aa16.59■□□□□ 0.25
PBX3-202ENST00000373482 UQCRBP14927 111 aa16.59■□□□□ 0.25
PBX3-202ENST00000373482 PRKAR1BP31321 381 aa16.59■□□□□ 0.25
PBX3-202ENST00000373482 CA7P43166 264 aa16.59■□□□□ 0.25
PBX3-202ENST00000373482 EEF1A1P68104 462 aaKnown RBP16.59■□□□□ 0.25
PBX3-202ENST00000373482 VEZF1Q14119 521 aa16.59■□□□□ 0.25
PBX3-202ENST00000373482 C3AR1Q16581 482 aa16.59■□□□□ 0.25
PBX3-202ENST00000373482 GXYLT1Q4G148 440 aa16.59■□□□□ 0.25
PBX3-202ENST00000373482 C16orf89Q6UX73 402 aa16.59■□□□□ 0.25
PBX3-202ENST00000373482 ARMC8Q8IUR7 673 aa16.59■□□□□ 0.25
PBX3-202ENST00000373482 ZNF563Q8TA94 476 aa16.59■□□□□ 0.25
PBX3-202ENST00000373482 SLC26A7Q8TE54 656 aa16.59■□□□□ 0.25
PBX3-202ENST00000373482 CNOT9Q92600 299 aaKnown RBP16.59■□□□□ 0.25
PBX3-202ENST00000373482 TIMP4Q99727 224 aa16.59■□□□□ 0.25
PBX3-202ENST00000373482 TP63Q9H3D4 680 aaPredicted RBP16.59■□□□□ 0.25
PBX3-202ENST00000373482 TINAGQ9UJW2 476 aa16.59■□□□□ 0.25
PBX3-202ENST00000373482 NCOA6Q14686 2063 aaPredicted RBP16.58■□□□□ 0.25
PBX3-202ENST00000373482 ELOVL7A1L3X0 281 aa16.58■□□□□ 0.24
PBX3-202ENST00000373482 C7orf72A4D263 438 aa16.58■□□□□ 0.24
PBX3-202ENST00000373482 FIGNL2A6NMB9 653 aa16.58■□□□□ 0.24
PBX3-202ENST00000373482 H3BML4 177 aa16.58■□□□□ 0.24
PBX3-202ENST00000373482 NME4O00746 187 aa16.58■□□□□ 0.24
PBX3-202ENST00000373482 DNAJA2O60884 412 aa16.58■□□□□ 0.24
PBX3-202ENST00000373482 WDR1O75083 606 aa16.58■□□□□ 0.24
PBX3-202ENST00000373482 LINGO3P0C6S8 592 aa16.58■□□□□ 0.24
PBX3-202ENST00000373482 PEPDP12955 493 aa16.58■□□□□ 0.24
PBX3-202ENST00000373482 GABRA1P14867 456 aa16.58■□□□□ 0.24
PBX3-202ENST00000373482 CALB2P22676 271 aa16.58■□□□□ 0.24
PBX3-202ENST00000373482 RYKP34925 604 aa16.58■□□□□ 0.24
PBX3-202ENST00000373482 PCBP3P57721 371 aaKnown RBP16.58■□□□□ 0.24
PBX3-202ENST00000373482 EEFSECP57772 596 aaKnown RBP16.58■□□□□ 0.24
PBX3-202ENST00000373482 B3GALT5-AS1P59052 145 aa16.58■□□□□ 0.24
PBX3-202ENST00000373482 KCNC4Q03721 635 aa16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms