RNA–Protein interactions for RNA: ENST00000373264.4

CDK9-201, Transcript of cyclin dependent kinase 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK9, Length 2,463 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-201ENST00000373264 BPIFA2Q96DR5 249 aa22.05■■□□□ 1.12
CDK9-201ENST00000373264 AGAP4Q96P64 663 aa22.05■■□□□ 1.12
CDK9-201ENST00000373264 DUSP22Q9NRW4 184 aa22.05■■□□□ 1.12
CDK9-201ENST00000373264 HCN3Q9P1Z3 774 aa22.05■■□□□ 1.12
CDK9-201ENST00000373264 CYP8B1Q9UNU6 501 aa22.05■■□□□ 1.12
CDK9-201ENST00000373264 A0A0J9YY10 115 aa22.04■■□□□ 1.12
CDK9-201ENST00000373264 DYRK3O43781 588 aa22.04■■□□□ 1.12
CDK9-201ENST00000373264 ZNF10P21506 573 aaPredicted RBP22.04■■□□□ 1.12
CDK9-201ENST00000373264 MAP3K8P41279 467 aa22.04■■□□□ 1.12
CDK9-201ENST00000373264 MAT1AQ00266 395 aaKnown RBP22.04■■□□□ 1.12
CDK9-201ENST00000373264 NDUFAF6Q330K2 333 aa22.04■■□□□ 1.12
CDK9-201ENST00000373264 FAM27D1Q5T7N8 215 aa22.04■■□□□ 1.12
CDK9-201ENST00000373264 DDI2Q5TDH0 399 aa22.04■■□□□ 1.12
CDK9-201ENST00000373264 GLCCI1Q86VQ1 547 aa22.04■■□□□ 1.12
CDK9-201ENST00000373264 DTX3Q8N9I9 347 aa22.04■■□□□ 1.12
CDK9-201ENST00000373264 NEIL3Q8TAT5 605 aa22.04■■□□□ 1.12
CDK9-201ENST00000373264 BRIX1Q8TDN6 353 aaKnown RBP22.04■■□□□ 1.12
CDK9-201ENST00000373264 CCDC3Q9BQI4 270 aa22.04■■□□□ 1.12
CDK9-201ENST00000373264 IFT27Q9BW83 186 aa22.04■■□□□ 1.12
CDK9-201ENST00000373264 C11orf54Q9H0W9 315 aaPredicted RBP22.04■■□□□ 1.12
CDK9-201ENST00000373264 NDRG2Q9UN36 371 aaKnown RBP22.04■■□□□ 1.12
CDK9-201ENST00000373264 A0A0A6YYC8 382 aaPredicted RBP22.04■■□□□ 1.12
CDK9-201ENST00000373264 TRDV1A0A1B0GX56 115 aa22.04■■□□□ 1.12
CDK9-201ENST00000373264 SHISA7A6NL88 538 aa22.04■■□□□ 1.12
CDK9-201ENST00000373264 I3L1I5 382 aaPredicted RBP22.04■■□□□ 1.12
CDK9-201ENST00000373264 BRINP1O60477 761 aa22.04■■□□□ 1.12
CDK9-201ENST00000373264 CCNKO75909 580 aa22.04■■□□□ 1.12
CDK9-201ENST00000373264 FGF9P31371 208 aaPredicted RBP22.04■■□□□ 1.12
CDK9-201ENST00000373264 POU6F2P78424 691 aaPredicted RBP22.04■■□□□ 1.12
CDK9-201ENST00000373264 GATAD2AQ86YP4 633 aa22.04■■□□□ 1.12
CDK9-201ENST00000373264 FAM160A2Q8N612 972 aaPredicted RBP22.04■■□□□ 1.12
CDK9-201ENST00000373264 HOXD1Q9GZZ0 328 aa22.04■■□□□ 1.12
CDK9-201ENST00000373264 ISYNA1Q9NPH2 558 aa22.04■■□□□ 1.12
CDK9-201ENST00000373264 GSTK1Q9Y2Q3 226 aa22.04■■□□□ 1.12
CDK9-201ENST00000373264 TNFP01375 233 aa22.03■■□□□ 1.12
CDK9-201ENST00000373264 HTR3AP46098 478 aa22.03■■□□□ 1.12
CDK9-201ENST00000373264 PSG6Q00889 435 aa22.03■■□□□ 1.12
CDK9-201ENST00000373264 UBQLNLQ8IYU4 475 aa22.03■■□□□ 1.12
CDK9-201ENST00000373264 FAM181AQ8N9Y4 354 aa22.03■■□□□ 1.12
CDK9-201ENST00000373264 CTHRC1Q96CG8 243 aa22.03■■□□□ 1.12
CDK9-201ENST00000373264 ATF6BQ99941 703 aa22.03■■□□□ 1.12
CDK9-201ENST00000373264 MED18Q9BUE0 208 aa22.03■■□□□ 1.12
CDK9-201ENST00000373264 TEX12Q9BXU0 123 aa22.03■■□□□ 1.12
CDK9-201ENST00000373264 RNF32Q9H0A6 362 aa22.03■■□□□ 1.12
CDK9-201ENST00000373264 A0A087WV62 115 aa22.03■■□□□ 1.12
CDK9-201ENST00000373264 POLR1CO15160 346 aaPredicted RBP22.03■■□□□ 1.12
CDK9-201ENST00000373264 HMGN1P05114 100 aa22.03■■□□□ 1.12
CDK9-201ENST00000373264 RPS7P62081 194 aaKnown RBP22.03■■□□□ 1.12
CDK9-201ENST00000373264 FOXK2Q01167 660 aa22.03■■□□□ 1.12
CDK9-201ENST00000373264 ZNF362Q5T0B9 420 aaPredicted RBP22.03■■□□□ 1.12
CDK9-201ENST00000373264 METTL27Q8N6F8 245 aaPredicted RBP22.03■■□□□ 1.12
CDK9-201ENST00000373264 SLC37A3Q8NCC5 494 aa22.03■■□□□ 1.12
CDK9-201ENST00000373264 OR10H4Q8NGA5 316 aa22.03■■□□□ 1.12
CDK9-201ENST00000373264 MED17Q9NVC6 651 aa22.03■■□□□ 1.12
CDK9-201ENST00000373264 SIGLEC7Q9Y286 467 aa22.03■■□□□ 1.12
CDK9-201ENST00000373264 CHST10O43529 356 aa22.02■■□□□ 1.12
CDK9-201ENST00000373264 AKAP8O43823 692 aaKnown RBP22.02■■□□□ 1.12
CDK9-201ENST00000373264 DRD1P21728 446 aa22.02■■□□□ 1.12
CDK9-201ENST00000373264 KRR1Q13601 381 aaKnown RBP22.02■■□□□ 1.12
CDK9-201ENST00000373264 CNIH2Q6PI25 160 aa22.02■■□□□ 1.12
CDK9-201ENST00000373264 RPTNQ6XPR3 784 aa22.02■■□□□ 1.12
CDK9-201ENST00000373264 RFLNBQ8N5W9 214 aa22.02■■□□□ 1.12
CDK9-201ENST00000373264 ALG8Q9BVK2 526 aa22.02■■□□□ 1.12
CDK9-201ENST00000373264 POT1Q9NUX5 634 aa22.02■■□□□ 1.12
CDK9-201ENST00000373264 PCDHGB2Q9Y5G2 931 aa22.02■■□□□ 1.12
CDK9-201ENST00000373264 CACNA1IQ9P0X4 2223 aa22.02■■□□□ 1.12
CDK9-201ENST00000373264 B4DGG1 531 aa22.02■■□□□ 1.12
CDK9-201ENST00000373264 LRRN3E7EW58 273 aa22.02■■□□□ 1.12
CDK9-201ENST00000373264 MAGEB4O15481 346 aaPredicted RBP22.02■■□□□ 1.12
CDK9-201ENST00000373264 OR10H2O60403 315 aa22.02■■□□□ 1.12
CDK9-201ENST00000373264 PPP1R3DO95685 299 aa22.02■■□□□ 1.12
CDK9-201ENST00000373264 HCCSP53701 268 aa22.02■■□□□ 1.12
CDK9-201ENST00000373264 YPEL5P62699 121 aa22.02■■□□□ 1.12
CDK9-201ENST00000373264 ZNF800Q2TB10 664 aaPredicted RBP eCLIP22.02■■□□□ 1.12
CDK9-201ENST00000373264 RSBN1Q5VWQ0 802 aaPredicted RBP22.02■■□□□ 1.12
CDK9-201ENST00000373264 ZNF517Q6ZMY9 492 aaPredicted RBP22.02■■□□□ 1.12
CDK9-201ENST00000373264 MEPCEQ7L2J0 689 aaKnown RBP22.02■■□□□ 1.12
CDK9-201ENST00000373264 VWA5B2Q8N398 1253 aa22.02■■□□□ 1.12
CDK9-201ENST00000373264 OR52L1Q8NGH7 329 aa22.02■■□□□ 1.12
CDK9-201ENST00000373264 RLN3Q8WXF3 142 aa22.02■■□□□ 1.12
CDK9-201ENST00000373264 SMAD5Q99717 465 aaKnown RBP22.02■■□□□ 1.12
CDK9-201ENST00000373264 LRRN3Q9H3W5 708 aa22.02■■□□□ 1.12
CDK9-201ENST00000373264 B3GAT2Q9NPZ5 323 aa22.02■■□□□ 1.12
CDK9-201ENST00000373264 SATB2Q9UPW6 733 aa22.02■■□□□ 1.12
CDK9-201ENST00000373264 SPACA6W5XKT8 324 aa22.02■■□□□ 1.12
CDK9-201ENST00000373264 HSFX4A0A1B0GTS1 333 aaPredicted RBP22.01■■□□□ 1.11
CDK9-201ENST00000373264 HSFX3A0A1B0GWH4 333 aaPredicted RBP22.01■■□□□ 1.11
CDK9-201ENST00000373264 PLA2G10O15496 165 aa22.01■■□□□ 1.11
CDK9-201ENST00000373264 BMP7P18075 431 aa22.01■■□□□ 1.11
CDK9-201ENST00000373264 S1PR1P21453 382 aa22.01■■□□□ 1.11
CDK9-201ENST00000373264 MRPS21P82921 87 aaKnown RBP22.01■■□□□ 1.11
CDK9-201ENST00000373264 HHEXQ03014 270 aa22.01■■□□□ 1.11
CDK9-201ENST00000373264 FZD2Q14332 565 aa22.01■■□□□ 1.11
CDK9-201ENST00000373264 PRPF38BQ5VTL8 546 aaKnown RBP22.01■■□□□ 1.11
CDK9-201ENST00000373264 DEFB119Q8N690 84 aa22.01■■□□□ 1.11
CDK9-201ENST00000373264 TOE1Q96GM8 510 aaKnown RBP22.01■■□□□ 1.11
CDK9-201ENST00000373264 TNFRSF13CQ96RJ3 184 aa22.01■■□□□ 1.11
CDK9-201ENST00000373264 STACQ99469 402 aa22.01■■□□□ 1.11
CDK9-201ENST00000373264 CLCA3PQ9Y6N3 262 aa22.01■■□□□ 1.11
CDK9-201ENST00000373264 SDK1Q7Z5N4 2213 aa22.01■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms