RNA–Protein interactions for RNA: ENST00000372407.4

PTPRF-203, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 2

Gene PTPRF, Length 4,600 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-203ENST00000372407 DPY19L2P1Q6NXN4 242 aa10.73□□□□□ -0.69
PTPRF-203ENST00000372407 DNAJC22Q8N4W6 341 aa10.73□□□□□ -0.69
PTPRF-203ENST00000372407 PARP16Q8N5Y8 322 aa10.73□□□□□ -0.69
PTPRF-203ENST00000372407 ZSCAN1Q8NBB4 408 aa10.73□□□□□ -0.69
PTPRF-203ENST00000372407 OR52E1Q8NGJ3 308 aa10.73□□□□□ -0.69
PTPRF-203ENST00000372407 LMF2Q9BU23 707 aaKnown RBP10.73□□□□□ -0.69
PTPRF-203ENST00000372407 SLC35A3Q9Y2D2 325 aa10.73□□□□□ -0.69
PTPRF-203ENST00000372407 V9GY05 133 aa10.73□□□□□ -0.69
PTPRF-203ENST00000372407 A6NIZ1 184 aa10.73□□□□□ -0.69
PTPRF-203ENST00000372407 F5H5P2 479 aa10.73□□□□□ -0.69
PTPRF-203ENST00000372407 SEC14L5O43304 696 aa10.73□□□□□ -0.69
PTPRF-203ENST00000372407 RDH16O75452 317 aa10.73□□□□□ -0.69
PTPRF-203ENST00000372407 RAP1BP61224 184 aa10.73□□□□□ -0.69
PTPRF-203ENST00000372407 RAP1AP62834 184 aa10.73□□□□□ -0.69
PTPRF-203ENST00000372407 CDK3Q00526 305 aa10.73□□□□□ -0.69
PTPRF-203ENST00000372407 GGTA1PQ4G0N0 100 aa10.73□□□□□ -0.69
PTPRF-203ENST00000372407 BCL7AQ4VC05 210 aa10.73□□□□□ -0.69
PTPRF-203ENST00000372407 MEX3DQ86XN8 651 aaKnown RBP10.73□□□□□ -0.69
PTPRF-203ENST00000372407 ZNF100Q8IYN0 542 aa10.73□□□□□ -0.69
PTPRF-203ENST00000372407 IL22RA1Q8N6P7 574 aa10.73□□□□□ -0.69
PTPRF-203ENST00000372407 OR7G2Q8NG99 324 aa10.73□□□□□ -0.69
PTPRF-203ENST00000372407 DDIT4LQ96D03 193 aa10.73□□□□□ -0.69
PTPRF-203ENST00000372407 ZNF285Q96NJ3 590 aa10.73□□□□□ -0.69
PTPRF-203ENST00000372407 CLSTN3Q9BQT9 956 aa10.73□□□□□ -0.69
PTPRF-203ENST00000372407 OLAHQ9NV23 265 aa10.73□□□□□ -0.69
PTPRF-203ENST00000372407 CXXC1Q9P0U4 656 aaPredicted RBP10.73□□□□□ -0.69
PTPRF-203ENST00000372407 SCN9AQ15858 1988 aa10.73□□□□□ -0.69
PTPRF-203ENST00000372407 P04436 131 aa10.72□□□□□ -0.69
PTPRF-203ENST00000372407 NUDT7P0C024 238 aa10.72□□□□□ -0.69
PTPRF-203ENST00000372407 ACP2P11117 423 aa10.72□□□□□ -0.69
PTPRF-203ENST00000372407 GPR19Q15760 415 aa10.72□□□□□ -0.69
PTPRF-203ENST00000372407 TMEM244Q5VVB8 128 aa10.72□□□□□ -0.69
PTPRF-203ENST00000372407 COMMD7Q86VX2 200 aa10.72□□□□□ -0.69
PTPRF-203ENST00000372407 SERPINA12Q8IW75 414 aa10.72□□□□□ -0.69
PTPRF-203ENST00000372407 METTL4Q8N3J2 472 aa10.72□□□□□ -0.69
PTPRF-203ENST00000372407 SNAPC3Q92966 411 aa10.72□□□□□ -0.69
PTPRF-203ENST00000372407 ARL11Q969Q4 196 aa10.72□□□□□ -0.69
PTPRF-203ENST00000372407 MUL1Q969V5 352 aa10.72□□□□□ -0.69
PTPRF-203ENST00000372407 INTS14Q96SY0 518 aa10.72□□□□□ -0.69
PTPRF-203ENST00000372407 KCMF1Q9P0J7 381 aa10.72□□□□□ -0.69
PTPRF-203ENST00000372407 ABRACLQ9P1F3 81 aa10.72□□□□□ -0.69
PTPRF-203ENST00000372407 LHX3Q9UBR4 397 aa10.72□□□□□ -0.69
PTPRF-203ENST00000372407 ASCC3Q8N3C0 2202 aaKnown RBP10.72□□□□□ -0.69
PTPRF-203ENST00000372407 A0A0A6YYC8 382 aaPredicted RBP10.72□□□□□ -0.69
PTPRF-203ENST00000372407 I3L1I5 382 aaPredicted RBP10.72□□□□□ -0.69
PTPRF-203ENST00000372407 FOXE1O00358 373 aaPredicted RBP10.72□□□□□ -0.69
PTPRF-203ENST00000372407 ACOT8O14734 319 aa10.72□□□□□ -0.69
PTPRF-203ENST00000372407 ZNF217O75362 1048 aa10.72□□□□□ -0.69
PTPRF-203ENST00000372407 DCST2Q5T1A1 773 aa10.72□□□□□ -0.69
PTPRF-203ENST00000372407 ZNF322Q6U7Q0 402 aaPredicted RBP10.72□□□□□ -0.69
PTPRF-203ENST00000372407 BRIX1Q8TDN6 353 aaKnown RBP10.72□□□□□ -0.69
PTPRF-203ENST00000372407 CDS1Q92903 461 aa10.72□□□□□ -0.69
PTPRF-203ENST00000372407 HCFC1R1Q9NWW0 138 aa10.72□□□□□ -0.69
PTPRF-203ENST00000372407 TMPRSS11EQ9UL52 423 aa10.72□□□□□ -0.69
PTPRF-203ENST00000372407 HHLA2Q9UM44 414 aa10.72□□□□□ -0.69
PTPRF-203ENST00000372407 KLK4Q9Y5K2 254 aa10.72□□□□□ -0.69
PTPRF-203ENST00000372407 MYO7AQ13402 2215 aa10.72□□□□□ -0.69
PTPRF-203ENST00000372407 KIR2DS5A0A0G2JLQ3 304 aa10.72□□□□□ -0.69
PTPRF-203ENST00000372407 A0A0G2JNG1 304 aa10.72□□□□□ -0.69
PTPRF-203ENST00000372407 C17orf105B2RV13 164 aa10.72□□□□□ -0.69
PTPRF-203ENST00000372407 KIR2DS3K7RE56 304 aa10.72□□□□□ -0.69
PTPRF-203ENST00000372407 GOSR2O14653 212 aa10.72□□□□□ -0.69
PTPRF-203ENST00000372407 DCNP07585 359 aaKnown RBP10.72□□□□□ -0.69
PTPRF-203ENST00000372407 ERVK-25P63136 954 aa10.72□□□□□ -0.69
PTPRF-203ENST00000372407 TSPAN31Q12999 210 aa10.72□□□□□ -0.69
PTPRF-203ENST00000372407 KIR2DS5Q14953 304 aa10.72□□□□□ -0.69
PTPRF-203ENST00000372407 PIP5KL1Q5T9C9 394 aa10.72□□□□□ -0.69
PTPRF-203ENST00000372407 C3P1Q6ZMU1 363 aa10.72□□□□□ -0.69
PTPRF-203ENST00000372407 MEPCEQ7L2J0 689 aaKnown RBP10.72□□□□□ -0.69
PTPRF-203ENST00000372407 TPRA1Q86W33 373 aa10.72□□□□□ -0.69
PTPRF-203ENST00000372407 IL17RCQ8NAC3 791 aa10.72□□□□□ -0.69
PTPRF-203ENST00000372407 OR5B12Q96R08 314 aa10.72□□□□□ -0.69
PTPRF-203ENST00000372407 SPIN2AQ99865 258 aa10.72□□□□□ -0.69
PTPRF-203ENST00000372407 SPIN2BQ9BPZ2 258 aa10.72□□□□□ -0.69
PTPRF-203ENST00000372407 MACROD1Q9BQ69 325 aa10.72□□□□□ -0.69
PTPRF-203ENST00000372407 EVA1AQ9H8M9 152 aa10.72□□□□□ -0.69
PTPRF-203ENST00000372407 GDE1Q9NZC3 331 aa10.72□□□□□ -0.69
PTPRF-203ENST00000372407 NPIPA5A0A0B4J1W7 369 aa10.72□□□□□ -0.69
PTPRF-203ENST00000372407 A0A0J9YY10 115 aa10.72□□□□□ -0.69
PTPRF-203ENST00000372407 NPIPA7E9PJI5 369 aa10.72□□□□□ -0.69
PTPRF-203ENST00000372407 F8W036 122 aa10.72□□□□□ -0.69
PTPRF-203ENST00000372407 GPRIN2O60269 458 aa10.72□□□□□ -0.69
PTPRF-203ENST00000372407 SPDEFO95238 335 aa10.72□□□□□ -0.69
PTPRF-203ENST00000372407 TSPAN15O95858 294 aa10.72□□□□□ -0.69
PTPRF-203ENST00000372407 KNG1P01042 644 aa10.72□□□□□ -0.69
PTPRF-203ENST00000372407 AKAIN1P0CW23 69 aa10.72□□□□□ -0.69
PTPRF-203ENST00000372407 NPIPA8P0DM63 369 aa10.72□□□□□ -0.69
PTPRF-203ENST00000372407 SLC2A5P22732 501 aa10.72□□□□□ -0.69
PTPRF-203ENST00000372407 PSMB10P40306 273 aa10.72□□□□□ -0.69
PTPRF-203ENST00000372407 BLOC1S1P78537 153 aa10.72□□□□□ -0.69
PTPRF-203ENST00000372407 TATDN3Q17R31 274 aa10.72□□□□□ -0.69
PTPRF-203ENST00000372407 GPR157Q5UAW9 335 aa10.72□□□□□ -0.69
PTPRF-203ENST00000372407 HACD4Q5VWC8 232 aa10.72□□□□□ -0.69
PTPRF-203ENST00000372407 RNF175Q8N4F7 328 aa10.72□□□□□ -0.69
PTPRF-203ENST00000372407 HORMAD2Q8N7B1 307 aa10.72□□□□□ -0.69
PTPRF-203ENST00000372407 FAM83FQ8NEG4 500 aaPredicted RBP10.72□□□□□ -0.69
PTPRF-203ENST00000372407 OR13F1Q8NGS4 319 aa10.72□□□□□ -0.69
PTPRF-203ENST00000372407 OR14K1Q8NGZ2 314 aa10.72□□□□□ -0.69
PTPRF-203ENST00000372407 FAM71F1Q96KD3 344 aaPredicted RBP10.72□□□□□ -0.69
PTPRF-203ENST00000372407 C4orf36Q96KX1 117 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms