RNA–Protein interactions for RNA: ENST00000371817.7

COL5A1-201, Transcript of collagen type V alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL5A1, Length 8,471 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-201ENST00000371817 ZNF891A8MT65 544 aaPredicted RBP14.42□□□□□ -0.1
COL5A1-201ENST00000371817 STATHP02808 62 aa14.42□□□□□ -0.1
COL5A1-201ENST00000371817 PIM1P11309 404 aaPredicted RBP14.42□□□□□ -0.1
COL5A1-201ENST00000371817 UBE2G2P60604 165 aa14.42□□□□□ -0.1
COL5A1-201ENST00000371817 C4orf36Q96KX1 117 aa14.42□□□□□ -0.1
COL5A1-201ENST00000371817 UMAD1C9J7I0 102 aa14.42□□□□□ -0.1
COL5A1-201ENST00000371817 CYB5BO43169 146 aa14.42□□□□□ -0.1
COL5A1-201ENST00000371817 TK1P04183 234 aa14.42□□□□□ -0.1
COL5A1-201ENST00000371817 CLDN8P56748 225 aa14.42□□□□□ -0.1
COL5A1-201ENST00000371817 SRRQ9GZT4 340 aa14.42□□□□□ -0.1
COL5A1-201ENST00000371817 ZCCHC4Q9H5U6 513 aa14.42□□□□□ -0.1
COL5A1-201ENST00000371817 PTGDR2Q9Y5Y4 395 aa14.42□□□□□ -0.1
COL5A1-201ENST00000371817 LAMA4Q16363 1823 aa14.42□□□□□ -0.1
COL5A1-201ENST00000371817 A6NL46 340 aa14.42□□□□□ -0.1
COL5A1-201ENST00000371817 SLC31A2O15432 143 aa14.42□□□□□ -0.1
COL5A1-201ENST00000371817 C1QBP02746 253 aa14.42□□□□□ -0.1
COL5A1-201ENST00000371817 PRDX3P30048 256 aaKnown RBP14.42□□□□□ -0.1
COL5A1-201ENST00000371817 BTNL8Q6UX41 500 aa14.42□□□□□ -0.1
COL5A1-201ENST00000371817 VITQ6UXI7 678 aa14.42□□□□□ -0.1
COL5A1-201ENST00000371817 LINC00116Q8NCU8 138 aa14.42□□□□□ -0.1
COL5A1-201ENST00000371817 CD276Q5ZPR3 534 aa14.42□□□□□ -0.1
COL5A1-201ENST00000371817 TMUB2Q71RG4 321 aa14.42□□□□□ -0.1
COL5A1-201ENST00000371817 B3GNT8Q7Z7M8 397 aa14.42□□□□□ -0.1
COL5A1-201ENST00000371817 GCNT2Q8N0V5 402 aa14.42□□□□□ -0.1
COL5A1-201ENST00000371817 TRIB3Q96RU7 358 aa14.42□□□□□ -0.1
COL5A1-201ENST00000371817 RANBP9Q96S59 729 aa14.42□□□□□ -0.1
COL5A1-201ENST00000371817 OSBPL2Q9H1P3 480 aa14.42□□□□□ -0.1
COL5A1-201ENST00000371817 DPEP3Q9H4B8 488 aa14.42□□□□□ -0.1
COL5A1-201ENST00000371817 WNT7AO00755 349 aa14.41□□□□□ -0.1
COL5A1-201ENST00000371817 IRAK2O43187 625 aa14.41□□□□□ -0.1
COL5A1-201ENST00000371817 ZNF623O75123 536 aa14.41□□□□□ -0.1
COL5A1-201ENST00000371817 GNSP15586 552 aa14.41□□□□□ -0.1
COL5A1-201ENST00000371817 CD52P31358 61 aa14.41□□□□□ -0.1
COL5A1-201ENST00000371817 EPHA4P54764 986 aa14.41□□□□□ -0.1
COL5A1-201ENST00000371817 SLC9A3R2Q15599 337 aa14.41□□□□□ -0.1
COL5A1-201ENST00000371817 PLEKHS1Q5SXH7 462 aa14.41□□□□□ -0.1
COL5A1-201ENST00000371817 PRAP1Q96NZ9 151 aa14.41□□□□□ -0.1
COL5A1-201ENST00000371817 DUS2Q9NX74 493 aaKnown RBP14.41□□□□□ -0.1
COL5A1-201ENST00000371817 LRIT2A6NDA9 550 aa14.41□□□□□ -0.1
COL5A1-201ENST00000371817 CEBPZOSA8MTT3 80 aa14.41□□□□□ -0.1
COL5A1-201ENST00000371817 SCAMP2O15127 329 aaKnown RBP14.41□□□□□ -0.1
COL5A1-201ENST00000371817 KCNQ2O43526 872 aa14.41□□□□□ -0.1
COL5A1-201ENST00000371817 SPP1P10451 314 aa14.41□□□□□ -0.1
COL5A1-201ENST00000371817 CAP1Q01518 475 aa14.41□□□□□ -0.1
COL5A1-201ENST00000371817 RPE65Q16518 533 aa14.41□□□□□ -0.1
COL5A1-201ENST00000371817 TMEM107Q6UX40 140 aa14.41□□□□□ -0.1
COL5A1-201ENST00000371817 TMEM125Q96AQ2 219 aa14.41□□□□□ -0.1
COL5A1-201ENST00000371817 ACTL7AQ9Y615 435 aa14.41□□□□□ -0.1
COL5A1-201ENST00000371817 CFAP20Q9Y6A4 193 aaKnown RBP14.41□□□□□ -0.1
COL5A1-201ENST00000371817 V9GYS6 101 aa14.41□□□□□ -0.1
COL5A1-201ENST00000371817 SMIM35A0A1B0GVV1 85 aa14.41□□□□□ -0.1
COL5A1-201ENST00000371817 BTBD17A6NE02 478 aa14.41□□□□□ -0.1
COL5A1-201ENST00000371817 ZFP92A6NM28 416 aa14.41□□□□□ -0.1
COL5A1-201ENST00000371817 OR13C7P0DN81 318 aa14.41□□□□□ -0.1
COL5A1-201ENST00000371817 ZNF836Q6ZNA1 936 aa14.41□□□□□ -0.1
COL5A1-201ENST00000371817 NLRC3Q7RTR2 1065 aa14.41□□□□□ -0.1
COL5A1-201ENST00000371817 MOCOSQ96EN8 888 aa14.41□□□□□ -0.1
COL5A1-201ENST00000371817 SLCO5A1Q9H2Y9 848 aa14.41□□□□□ -0.1
COL5A1-201ENST00000371817 SMIM28A0A1B0GU29 152 aa14.41□□□□□ -0.1
COL5A1-201ENST00000371817 XRCC3O43542 346 aa14.41□□□□□ -0.1
COL5A1-201ENST00000371817 TRAF3IP2O43734 574 aaPredicted RBP14.41□□□□□ -0.1
COL5A1-201ENST00000371817 SORBS2O94875 1100 aaKnown RBP14.41□□□□□ -0.1
COL5A1-201ENST00000371817 ACP5P13686 325 aa14.41□□□□□ -0.1
COL5A1-201ENST00000371817 PAX6P26367 422 aa14.41□□□□□ -0.1
COL5A1-201ENST00000371817 DCTP40126 519 aa14.41□□□□□ -0.1
COL5A1-201ENST00000371817 SP2Q02086 613 aa14.41□□□□□ -0.1
COL5A1-201ENST00000371817 MELKQ14680 651 aa14.41□□□□□ -0.1
COL5A1-201ENST00000371817 TESK1Q15569 626 aa14.41□□□□□ -0.1
COL5A1-201ENST00000371817 SUSD1Q6UWL2 747 aa14.41□□□□□ -0.1
COL5A1-201ENST00000371817 CXCL17Q6UXB2 119 aa14.41□□□□□ -0.1
COL5A1-201ENST00000371817 Q6ZNX1 250 aa14.41□□□□□ -0.1
COL5A1-201ENST00000371817 RADILQ96JH8 1075 aa14.41□□□□□ -0.1
COL5A1-201ENST00000371817 SLC35D1Q9NTN3 355 aa14.41□□□□□ -0.1
COL5A1-201ENST00000371817 MST1RQ04912 1400 aa14.41□□□□□ -0.1
COL5A1-201ENST00000371817 LILRB3O75022 631 aa14.41□□□□□ -0.1
COL5A1-201ENST00000371817 SNCGO76070 127 aa14.41□□□□□ -0.1
COL5A1-201ENST00000371817 RAB1AP62820 205 aa14.41□□□□□ -0.1
COL5A1-201ENST00000371817 SEMG2Q02383 582 aa14.41□□□□□ -0.1
COL5A1-201ENST00000371817 NBPF12Q5TAG4 269 aaPredicted RBP14.41□□□□□ -0.1
COL5A1-201ENST00000371817 TMEM88Q6PEY1 159 aa14.41□□□□□ -0.1
COL5A1-201ENST00000371817 OR1S2Q8NGQ3 325 aa14.41□□□□□ -0.1
COL5A1-201ENST00000371817 PIGVQ9NUD9 493 aa14.41□□□□□ -0.1
COL5A1-201ENST00000371817 USP36Q9P275 1121 aaKnown RBP14.41□□□□□ -0.1
COL5A1-201ENST00000371817 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP14.41□□□□□ -0.1
COL5A1-201ENST00000371817 HPNP05981 417 aa14.41□□□□□ -0.1
COL5A1-201ENST00000371817 MAT2AP31153 395 aaKnown RBP14.41□□□□□ -0.1
COL5A1-201ENST00000371817 PCGF2P35227 344 aa14.41□□□□□ -0.1
COL5A1-201ENST00000371817 ADARB1P78563 741 aaKnown RBP14.41□□□□□ -0.1
COL5A1-201ENST00000371817 GAB1Q13480 694 aa14.41□□□□□ -0.1
COL5A1-201ENST00000371817 CLEC4CQ8WTT0 213 aa14.41□□□□□ -0.1
COL5A1-201ENST00000371817 HERVK_113Q902F9 699 aa14.41□□□□□ -0.1
COL5A1-201ENST00000371817 SCLYQ96I15 445 aa14.41□□□□□ -0.1
COL5A1-201ENST00000371817 DOCK11Q5JSL3 2073 aa14.41□□□□□ -0.1
COL5A1-201ENST00000371817 GPR85P60893 370 aa14.4□□□□□ -0.1
COL5A1-201ENST00000371817 SELENOWP63302 87 aa14.4□□□□□ -0.1
COL5A1-201ENST00000371817 MS4A2Q01362 244 aa14.4□□□□□ -0.1
COL5A1-201ENST00000371817 ZNRF4Q8WWF5 429 aa14.4□□□□□ -0.1
COL5A1-201ENST00000371817 ZNF331Q9NQX6 463 aaPredicted RBP14.4□□□□□ -0.1
COL5A1-201ENST00000371817 DCAF13Q9NV06 445 aaKnown RBP14.4□□□□□ -0.1
COL5A1-201ENST00000371817 OR6C68A6NDL8 312 aa14.4□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms