RNA–Protein interactions for RNA: ENST00000371146.5

USP1-202, Transcript of ubiquitin specific peptidase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP1, Length 3,507 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP1-202ENST00000371146 TRUB1Q8WWH5 349 aaKnown RBP6.5□□□□□ -1.37
USP1-202ENST00000371146 TM4SF18Q96CE8 201 aa6.5□□□□□ -1.37
USP1-202ENST00000371146 CNRIP1Q96F85 164 aaPredicted RBP6.5□□□□□ -1.37
USP1-202ENST00000371146 MAGEB18Q96M61 343 aa6.5□□□□□ -1.37
USP1-202ENST00000371146 SPSB2Q99619 263 aa6.5□□□□□ -1.37
USP1-202ENST00000371146 TRMOQ9BU70 441 aa6.5□□□□□ -1.37
USP1-202ENST00000371146 DSN1Q9H410 356 aa6.5□□□□□ -1.37
USP1-202ENST00000371146 TUBB1Q9H4B7 451 aa6.5□□□□□ -1.37
USP1-202ENST00000371146 PRDM7Q9NQW5 492 aa6.5□□□□□ -1.37
USP1-202ENST00000371146 EXD2Q9NVH0 621 aa6.5□□□□□ -1.37
USP1-202ENST00000371146 NXT1Q9UKK6 140 aaKnown RBP6.5□□□□□ -1.37
USP1-202ENST00000371146 SPATA2Q9UM82 520 aa6.5□□□□□ -1.37
USP1-202ENST00000371146 LOC390937A0A1W2PQ73 354 aa6.5□□□□□ -1.37
USP1-202ENST00000371146 PCDH17O14917 1159 aa6.5□□□□□ -1.37
USP1-202ENST00000371146 TYROBPO43914 113 aa6.5□□□□□ -1.37
USP1-202ENST00000371146 ENTPD5O75356 428 aa6.5□□□□□ -1.37
USP1-202ENST00000371146 RASAL1O95294 804 aa6.5□□□□□ -1.37
USP1-202ENST00000371146 FGF5P12034 268 aa6.5□□□□□ -1.37
USP1-202ENST00000371146 UQCRC1P31930 480 aa6.5□□□□□ -1.37
USP1-202ENST00000371146 NR1H2P55055 460 aa6.5□□□□□ -1.37
USP1-202ENST00000371146 SLC26A5P58743 744 aa6.5□□□□□ -1.37
USP1-202ENST00000371146 RNF4P78317 190 aa6.5□□□□□ -1.37
USP1-202ENST00000371146 AIMP2Q13155 320 aaKnown RBP6.5□□□□□ -1.37
USP1-202ENST00000371146 RABL3Q5HYI8 236 aa6.5□□□□□ -1.37
USP1-202ENST00000371146 UGT2A3Q6UWM9 527 aa6.5□□□□□ -1.37
USP1-202ENST00000371146 MED25Q71SY5 747 aa6.5□□□□□ -1.37
USP1-202ENST00000371146 NDUFAF7Q7L592 441 aa6.5□□□□□ -1.37
USP1-202ENST00000371146 ANKRD37Q7Z713 158 aa6.5□□□□□ -1.37
USP1-202ENST00000371146 CCDC71Q8IV32 467 aaPredicted RBP6.5□□□□□ -1.37
USP1-202ENST00000371146 C19orf43Q9BQ61 176 aa6.5□□□□□ -1.37
USP1-202ENST00000371146 OR51B6Q9H340 312 aa6.5□□□□□ -1.37
USP1-202ENST00000371146 RPS6KA6Q9UK32 745 aa6.5□□□□□ -1.37
USP1-202ENST00000371146 KCNMB2Q9Y691 235 aa6.5□□□□□ -1.37
USP1-202ENST00000371146 MN1Q10571 1320 aaPredicted RBP6.49□□□□□ -1.37
USP1-202ENST00000371146 EIF1AYO14602 144 aaKnown RBP6.49□□□□□ -1.37
USP1-202ENST00000371146 OR6A2O95222 327 aa6.49□□□□□ -1.37
USP1-202ENST00000371146 CSTAP01040 98 aa6.49□□□□□ -1.37
USP1-202ENST00000371146 SLC6A2P23975 617 aa6.49□□□□□ -1.37
USP1-202ENST00000371146 ARRB2P32121 409 aa6.49□□□□□ -1.37
USP1-202ENST00000371146 CD96P40200 585 aa6.49□□□□□ -1.37
USP1-202ENST00000371146 IDH3AP50213 366 aa6.49□□□□□ -1.37
USP1-202ENST00000371146 TNFRSF17Q02223 184 aa6.49□□□□□ -1.37
USP1-202ENST00000371146 SERTAD2Q14140 314 aa6.49□□□□□ -1.37
USP1-202ENST00000371146 C21orf62-AS1Q17RA5 79 aa6.49□□□□□ -1.37
USP1-202ENST00000371146 PLEKHN1Q494U1 663 aaPredicted RBP6.49□□□□□ -1.37
USP1-202ENST00000371146 SPATS1Q496A3 300 aa6.49□□□□□ -1.37
USP1-202ENST00000371146 GARNL3Q5VVW2 1013 aa6.49□□□□□ -1.37
USP1-202ENST00000371146 PEAR1Q5VY43 1037 aaPredicted RBP6.49□□□□□ -1.37
USP1-202ENST00000371146 CARD17Q5XLA6 110 aa6.49□□□□□ -1.37
USP1-202ENST00000371146 B3GNT7Q8NFL0 401 aa6.49□□□□□ -1.37
USP1-202ENST00000371146 RADILQ96JH8 1075 aa6.49□□□□□ -1.37
USP1-202ENST00000371146 FRMD6Q96NE9 622 aa6.49□□□□□ -1.37
USP1-202ENST00000371146 SUCOQ9UBS9 1254 aaKnown RBP6.49□□□□□ -1.37
USP1-202ENST00000371146 C11orf98E9PRG8 122 aa6.49□□□□□ -1.37
USP1-202ENST00000371146 RBBP9O75884 186 aa6.49□□□□□ -1.37
USP1-202ENST00000371146 UQCRBP14927 111 aa6.49□□□□□ -1.37
USP1-202ENST00000371146 CCNOP22674 350 aa6.49□□□□□ -1.37
USP1-202ENST00000371146 TSPAN5P62079 268 aa6.49□□□□□ -1.37
USP1-202ENST00000371146 HBA1P69905 142 aa6.49□□□□□ -1.37
USP1-202ENST00000371146 DUSP2Q05923 314 aa6.49□□□□□ -1.37
USP1-202ENST00000371146 MERTKQ12866 999 aa6.49□□□□□ -1.37
USP1-202ENST00000371146 TRIM16LQ309B1 348 aa6.49□□□□□ -1.37
USP1-202ENST00000371146 FAM198BQ6UWH4 519 aa6.49□□□□□ -1.37
USP1-202ENST00000371146 PPP1R32Q7Z5V6 425 aa6.49□□□□□ -1.37
USP1-202ENST00000371146 DHDDSQ86SQ9 333 aa6.49□□□□□ -1.37
USP1-202ENST00000371146 ZNF595Q8IYB9 648 aa6.49□□□□□ -1.37
USP1-202ENST00000371146 DEFB107AQ8IZN7 70 aa6.49□□□□□ -1.37
USP1-202ENST00000371146 METTL25Q8N6Q8 603 aa6.49□□□□□ -1.37
USP1-202ENST00000371146 PROKR1Q8TCW9 393 aa6.49□□□□□ -1.37
USP1-202ENST00000371146 CKAP2Q8WWK9 683 aa6.49□□□□□ -1.37
USP1-202ENST00000371146 TEX37Q96LM6 180 aa6.49□□□□□ -1.37
USP1-202ENST00000371146 SLC6A15Q9H2J7 730 aa6.49□□□□□ -1.37
USP1-202ENST00000371146 OR51I1Q9H343 314 aa6.49□□□□□ -1.37
USP1-202ENST00000371146 GLIPR2Q9H4G4 154 aa6.49□□□□□ -1.37
USP1-202ENST00000371146 ZNF696Q9H7X3 374 aa6.49□□□□□ -1.37
USP1-202ENST00000371146 GLRX2Q9NS18 164 aa6.49□□□□□ -1.37
USP1-202ENST00000371146 LYARQ9NX58 379 aaKnown RBP6.49□□□□□ -1.37
USP1-202ENST00000371146 FETUBQ9UGM5 382 aa6.49□□□□□ -1.37
USP1-202ENST00000371146 IGHV3-15A0A0B4J1V0 119 aa6.49□□□□□ -1.37
USP1-202ENST00000371146 EFCAB10A6NFE3 127 aa6.49□□□□□ -1.37
USP1-202ENST00000371146 CLIC1O00299 241 aa6.49□□□□□ -1.37
USP1-202ENST00000371146 CCL21O00585 134 aa6.49□□□□□ -1.37
USP1-202ENST00000371146 APOC1P02654 83 aa6.49□□□□□ -1.37
USP1-202ENST00000371146 NUDT7P0C024 238 aa6.49□□□□□ -1.37
USP1-202ENST00000371146 PRPS2P11908 318 aa6.49□□□□□ -1.37
USP1-202ENST00000371146 PRPS1L1P21108 318 aa6.49□□□□□ -1.37
USP1-202ENST00000371146 HOXA1P49639 335 aaPredicted RBP6.49□□□□□ -1.37
USP1-202ENST00000371146 GPR143P51810 404 aa6.49□□□□□ -1.37
USP1-202ENST00000371146 SLC7A2P52569 658 aa6.49□□□□□ -1.37
USP1-202ENST00000371146 RGS8P57771 180 aaPredicted RBP6.49□□□□□ -1.37
USP1-202ENST00000371146 GANABQ14697 944 aaKnown RBP6.49□□□□□ -1.37
USP1-202ENST00000371146 MEP1AQ16819 746 aa6.49□□□□□ -1.37
USP1-202ENST00000371146 MZT2BQ6NZ67 158 aa6.49□□□□□ -1.37
USP1-202ENST00000371146 IZUMO2Q6UXV1 221 aa6.49□□□□□ -1.37
USP1-202ENST00000371146 TDRPQ86YL5 185 aa6.49□□□□□ -1.37
USP1-202ENST00000371146 OR7G2Q8NG99 324 aa6.49□□□□□ -1.37
USP1-202ENST00000371146 OR52N1Q8NH53 320 aa6.49□□□□□ -1.37
USP1-202ENST00000371146 TXNDC15Q96J42 360 aa6.49□□□□□ -1.37
USP1-202ENST00000371146 GPR87Q9BY21 358 aa6.49□□□□□ -1.37
USP1-202ENST00000371146 PAIP1Q9H074 479 aaKnown RBP6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms