RNA–Protein interactions for RNA: ENST00000370966.9

DEPDC1-201, Transcript of DEP domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DEPDC1, Length 4,586 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-201ENST00000370966 ZNF767PQ75MW2 155 aa11.1□□□□□ -0.63
DEPDC1-201ENST00000370966 UEVLDQ8IX04 471 aa11.1□□□□□ -0.63
DEPDC1-201ENST00000370966 OR5T2Q8NGG2 359 aa11.1□□□□□ -0.63
DEPDC1-201ENST00000370966 OR5J2Q8NH18 312 aa11.1□□□□□ -0.63
DEPDC1-201ENST00000370966 KCMF1Q9P0J7 381 aa11.1□□□□□ -0.63
DEPDC1-201ENST00000370966 CBLCQ9ULV8 474 aa11.1□□□□□ -0.63
DEPDC1-201ENST00000370966 TRAV18A0A075B6X5 111 aa11.1□□□□□ -0.63
DEPDC1-201ENST00000370966 PTGS2P35354 604 aa11.1□□□□□ -0.63
DEPDC1-201ENST00000370966 GALK2Q01415 458 aa11.1□□□□□ -0.63
DEPDC1-201ENST00000370966 HES5Q5TA89 166 aa11.1□□□□□ -0.63
DEPDC1-201ENST00000370966 WBP2NLQ6ICG8 309 aa11.1□□□□□ -0.63
DEPDC1-201ENST00000370966 KCTD20Q7Z5Y7 419 aa11.1□□□□□ -0.63
DEPDC1-201ENST00000370966 CCDC28AQ8IWP9 274 aa11.1□□□□□ -0.63
DEPDC1-201ENST00000370966 BEST3Q8N1M1 668 aa11.1□□□□□ -0.63
DEPDC1-201ENST00000370966 KCTD12Q96CX2 325 aaKnown RBP11.1□□□□□ -0.63
DEPDC1-201ENST00000370966 NDUFAF4Q9P032 175 aa11.1□□□□□ -0.63
DEPDC1-201ENST00000370966 TAAR2Q9P1P5 351 aa11.1□□□□□ -0.63
DEPDC1-201ENST00000370966 STRCQ7RTU9 1775 aa11.1□□□□□ -0.63
DEPDC1-201ENST00000370966 ACOT7O00154 380 aa11.09□□□□□ -0.63
DEPDC1-201ENST00000370966 SEC14L2O76054 403 aa11.09□□□□□ -0.63
DEPDC1-201ENST00000370966 GABARAPO95166 117 aa11.09□□□□□ -0.63
DEPDC1-201ENST00000370966 SLC6A12P48065 614 aa11.09□□□□□ -0.63
DEPDC1-201ENST00000370966 DAP3P51398 398 aaKnown RBP11.09□□□□□ -0.63
DEPDC1-201ENST00000370966 EMP2P54851 167 aa11.09□□□□□ -0.63
DEPDC1-201ENST00000370966 MRPL2Q5T653 305 aaKnown RBP11.09□□□□□ -0.63
DEPDC1-201ENST00000370966 KDM4DQ6B0I6 523 aa11.09□□□□□ -0.63
DEPDC1-201ENST00000370966 METAP1DQ6UB28 335 aaPredicted RBP11.09□□□□□ -0.63
DEPDC1-201ENST00000370966 LRRC28Q86X40 367 aaPredicted RBP11.09□□□□□ -0.63
DEPDC1-201ENST00000370966 ZSCAN4Q8NAM6 433 aaPredicted RBP11.09□□□□□ -0.63
DEPDC1-201ENST00000370966 VN1R2Q8NFZ6 395 aa11.09□□□□□ -0.63
DEPDC1-201ENST00000370966 INTS14Q96SY0 518 aa11.09□□□□□ -0.63
DEPDC1-201ENST00000370966 ZNF350Q9GZX5 532 aa11.09□□□□□ -0.63
DEPDC1-201ENST00000370966 ANKRD19PQ9H560 264 aa11.09□□□□□ -0.63
DEPDC1-201ENST00000370966 ABRACLQ9P1F3 81 aa11.09□□□□□ -0.63
DEPDC1-201ENST00000370966 AK6Q9Y3D8 172 aaKnown RBP11.09□□□□□ -0.63
DEPDC1-201ENST00000370966 PIGBOS1A0A0B4J2F0 54 aa11.09□□□□□ -0.63
DEPDC1-201ENST00000370966 FAM183AA6NL82 134 aa11.09□□□□□ -0.63
DEPDC1-201ENST00000370966 AMY2BP19961 511 aa11.09□□□□□ -0.63
DEPDC1-201ENST00000370966 PRKXP51817 358 aa11.09□□□□□ -0.63
DEPDC1-201ENST00000370966 METTL11BQ5VVY1 283 aa11.09□□□□□ -0.63
DEPDC1-201ENST00000370966 LMNTD1Q8N9Z9 388 aa11.09□□□□□ -0.63
DEPDC1-201ENST00000370966 PMM1Q92871 262 aa11.09□□□□□ -0.63
DEPDC1-201ENST00000370966 RPL3LQ92901 407 aaKnown RBP11.09□□□□□ -0.63
DEPDC1-201ENST00000370966 AMDHD1Q96NU7 426 aa11.09□□□□□ -0.63
DEPDC1-201ENST00000370966 CRB3Q9BUF7 120 aa11.09□□□□□ -0.63
DEPDC1-201ENST00000370966 ZNF700Q9H0M5 742 aa11.09□□□□□ -0.63
DEPDC1-201ENST00000370966 ZNF701Q9NV72 531 aaPredicted RBP11.09□□□□□ -0.63
DEPDC1-201ENST00000370966 CTDSP2O14595 271 aa11.09□□□□□ -0.63
DEPDC1-201ENST00000370966 P04436 131 aa11.09□□□□□ -0.63
DEPDC1-201ENST00000370966 CLUP10909 449 aa11.09□□□□□ -0.63
DEPDC1-201ENST00000370966 CD38P28907 300 aa11.09□□□□□ -0.63
DEPDC1-201ENST00000370966 PRKAR1BP31321 381 aa11.09□□□□□ -0.63
DEPDC1-201ENST00000370966 EIF2DP41214 584 aaKnown RBP11.09□□□□□ -0.63
DEPDC1-201ENST00000370966 HTR3AP46098 478 aa11.09□□□□□ -0.63
DEPDC1-201ENST00000370966 RAB38P57729 211 aa11.09□□□□□ -0.63
DEPDC1-201ENST00000370966 RPS15P62841 145 aaKnown RBP11.09□□□□□ -0.63
DEPDC1-201ENST00000370966 CSNK1G2P78368 415 aa11.09□□□□□ -0.63
DEPDC1-201ENST00000370966 AIMP2Q13155 320 aaKnown RBP11.09□□□□□ -0.63
DEPDC1-201ENST00000370966 NKAPLQ5M9Q1 402 aa11.09□□□□□ -0.63
DEPDC1-201ENST00000370966 PRAMEF8Q5VWM4 474 aa11.09□□□□□ -0.63
DEPDC1-201ENST00000370966 PRAMEF7Q5VXH5 474 aa11.09□□□□□ -0.63
DEPDC1-201ENST00000370966 CARD17Q5XLA6 110 aa11.09□□□□□ -0.63
DEPDC1-201ENST00000370966 SLC46A3Q7Z3Q1 461 aa11.09□□□□□ -0.63
DEPDC1-201ENST00000370966 PARP16Q8N5Y8 322 aa11.09□□□□□ -0.63
DEPDC1-201ENST00000370966 LILRA3Q8N6C8 439 aaPredicted RBP11.09□□□□□ -0.63
DEPDC1-201ENST00000370966 TBC1D15Q8TC07 691 aa11.09□□□□□ -0.63
DEPDC1-201ENST00000370966 ADOQ96SZ5 270 aa11.09□□□□□ -0.63
DEPDC1-201ENST00000370966 SLC6A7Q99884 636 aa11.09□□□□□ -0.63
DEPDC1-201ENST00000370966 GLIPR2Q9H4G4 154 aa11.09□□□□□ -0.63
DEPDC1-201ENST00000370966 FBXL3Q9UKT7 428 aa11.09□□□□□ -0.63
DEPDC1-201ENST00000370966 NUBP2Q9Y5Y2 271 aa11.09□□□□□ -0.63
DEPDC1-201ENST00000370966 A3GALT2U3KPV4 340 aa11.09□□□□□ -0.63
DEPDC1-201ENST00000370966 BORCS7-ASMTA0A0B4J1R7 106 aa11.09□□□□□ -0.63
DEPDC1-201ENST00000370966 GJE1A6NN92 205 aa11.09□□□□□ -0.63
DEPDC1-201ENST00000370966 ARHGAP33O14559 1287 aa11.09□□□□□ -0.63
DEPDC1-201ENST00000370966 VNN2O95498 520 aa11.09□□□□□ -0.63
DEPDC1-201ENST00000370966 GABRA5P31644 462 aa11.09□□□□□ -0.63
DEPDC1-201ENST00000370966 ERVK-25P63136 954 aa11.09□□□□□ -0.63
DEPDC1-201ENST00000370966 CBFBQ13951 182 aa11.09□□□□□ -0.63
DEPDC1-201ENST00000370966 FAM69AQ5T7M9 428 aa11.09□□□□□ -0.63
DEPDC1-201ENST00000370966 AGAP6Q5VW22 663 aa11.09□□□□□ -0.63
DEPDC1-201ENST00000370966 FCRLBQ6BAA4 426 aa11.09□□□□□ -0.63
DEPDC1-201ENST00000370966 ABHD17CQ6PCB6 329 aa11.09□□□□□ -0.63
DEPDC1-201ENST00000370966 WDR53Q7Z5U6 358 aaPredicted RBP11.09□□□□□ -0.63
DEPDC1-201ENST00000370966 MEX3DQ86XN8 651 aaKnown RBP11.09□□□□□ -0.63
DEPDC1-201ENST00000370966 OR2T35Q8NGX2 323 aa11.09□□□□□ -0.63
DEPDC1-201ENST00000370966 AGAP4Q96P64 663 aa11.09□□□□□ -0.63
DEPDC1-201ENST00000370966 AIFM2Q9BRQ8 373 aa11.09□□□□□ -0.63
DEPDC1-201ENST00000370966 THAP7Q9BT49 309 aaPredicted RBP11.09□□□□□ -0.63
DEPDC1-201ENST00000370966 ZNF304Q9HCX3 659 aa11.09□□□□□ -0.63
DEPDC1-201ENST00000370966 INIPQ9NRY2 104 aa11.09□□□□□ -0.63
DEPDC1-201ENST00000370966 A0A1W2PQ09 198 aa11.08□□□□□ -0.64
DEPDC1-201ENST00000370966 SYT7O43581 403 aa11.08□□□□□ -0.64
DEPDC1-201ENST00000370966 DRD5P21918 477 aa11.08□□□□□ -0.64
DEPDC1-201ENST00000370966 CCSMST1Q4G0I0 132 aa11.08□□□□□ -0.64
DEPDC1-201ENST00000370966 METRNLQ641Q3 311 aa11.08□□□□□ -0.64
DEPDC1-201ENST00000370966 ZNF322Q6U7Q0 402 aaPredicted RBP11.08□□□□□ -0.64
DEPDC1-201ENST00000370966 GPR137CQ8N3F9 429 aa11.08□□□□□ -0.64
DEPDC1-201ENST00000370966 OR9A4Q8NGU2 314 aa11.08□□□□□ -0.64
DEPDC1-201ENST00000370966 C4orf36Q96KX1 117 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms