RNA–Protein interactions for RNA: ENST00000368671.3

CLRN3-201, Transcript of clarin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLRN3, Length 1,152 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN3-201ENST00000368671 PAX1P15863 534 aa9.21□□□□□ -0.94
CLRN3-201ENST00000368671 PSMB1P20618 241 aaKnown RBP9.21□□□□□ -0.94
CLRN3-201ENST00000368671 ATP6V1C1P21283 382 aa9.21□□□□□ -0.94
CLRN3-201ENST00000368671 IL32P24001 234 aa9.21□□□□□ -0.94
CLRN3-201ENST00000368671 LCN1P31025 176 aa9.21□□□□□ -0.94
CLRN3-201ENST00000368671 SERPINB4P48594 390 aa9.21□□□□□ -0.94
CLRN3-201ENST00000368671 CCT5P48643 541 aa9.21□□□□□ -0.94
CLRN3-201ENST00000368671 ZNF117Q03924 483 aa9.21□□□□□ -0.94
CLRN3-201ENST00000368671 PDE7AQ13946 482 aa9.21□□□□□ -0.94
CLRN3-201ENST00000368671 CAPRIN1Q14444 709 aaKnown RBP9.21□□□□□ -0.94
CLRN3-201ENST00000368671 LASP1Q14847 261 aaKnown RBP9.21□□□□□ -0.94
CLRN3-201ENST00000368671 CLEC12BQ2HXU8 276 aa9.21□□□□□ -0.94
CLRN3-201ENST00000368671 ZCCHC12Q6PEW1 402 aa9.21□□□□□ -0.94
CLRN3-201ENST00000368671 LRIG3Q6UXM1 1119 aa9.21□□□□□ -0.94
CLRN3-201ENST00000368671 C10orf107Q8IVU9 208 aa9.21□□□□□ -0.94
CLRN3-201ENST00000368671 TUSC5Q8IXB3 177 aa9.21□□□□□ -0.94
CLRN3-201ENST00000368671 DDIASQ8IXT1 998 aa9.21□□□□□ -0.94
CLRN3-201ENST00000368671 MAPK1IP1LQ8NDC0 245 aa9.21□□□□□ -0.94
CLRN3-201ENST00000368671 FBXO27Q8NI29 283 aa9.21□□□□□ -0.94
CLRN3-201ENST00000368671 RNF128Q8TEB7 428 aa9.21□□□□□ -0.94
CLRN3-201ENST00000368671 UBLCP1Q8WVY7 318 aaPredicted RBP9.21□□□□□ -0.94
CLRN3-201ENST00000368671 CPNE4Q96A23 557 aaPredicted RBP9.21□□□□□ -0.94
CLRN3-201ENST00000368671 FAM120BQ96EK7 910 aaKnown RBP9.21□□□□□ -0.94
CLRN3-201ENST00000368671 ZNF764Q96H86 408 aaPredicted RBP9.21□□□□□ -0.94
CLRN3-201ENST00000368671 BTBD2Q9BX70 525 aa9.21□□□□□ -0.94
CLRN3-201ENST00000368671 TXLNGYQ9BZA5 131 aa9.21□□□□□ -0.94
CLRN3-201ENST00000368671 TIGARQ9NQ88 270 aa9.21□□□□□ -0.94
CLRN3-201ENST00000368671 SIRT3Q9NTG7 399 aaPredicted RBP9.21□□□□□ -0.94
CLRN3-201ENST00000368671 NTMQ9P121 344 aa9.21□□□□□ -0.94
CLRN3-201ENST00000368671 ADAM21Q9UKJ8 722 aa9.21□□□□□ -0.94
CLRN3-201ENST00000368671 RNF115Q9Y4L5 304 aa9.21□□□□□ -0.94
CLRN3-201ENST00000368671 SNX8Q9Y5X2 465 aa9.21□□□□□ -0.94
CLRN3-201ENST00000368671 ACANP16112 2415 aa9.21□□□□□ -0.94
CLRN3-201ENST00000368671 IGHV3-15A0A0B4J1V0 119 aa9.2□□□□□ -0.94
CLRN3-201ENST00000368671 GJE1A6NN92 205 aa9.2□□□□□ -0.94
CLRN3-201ENST00000368671 TMEM233B4DJY2 109 aa9.2□□□□□ -0.94
CLRN3-201ENST00000368671 ZNF195O14628 629 aa9.2□□□□□ -0.94
CLRN3-201ENST00000368671 LSM1O15116 133 aaKnown RBP9.2□□□□□ -0.94
CLRN3-201ENST00000368671 EFNA2O43921 213 aa9.2□□□□□ -0.94
CLRN3-201ENST00000368671 TMCC2O75069 709 aa9.2□□□□□ -0.94
CLRN3-201ENST00000368671 GCM2O75603 506 aaPredicted RBP9.2□□□□□ -0.94
CLRN3-201ENST00000368671 ADAP00813 363 aa9.2□□□□□ -0.94
CLRN3-201ENST00000368671 HMGN2P05204 90 aaKnown RBP9.2□□□□□ -0.94
CLRN3-201ENST00000368671 CD3EP07766 207 aa9.2□□□□□ -0.94
CLRN3-201ENST00000368671 PABPC4LP0CB38 370 aaKnown RBP9.2□□□□□ -0.94
CLRN3-201ENST00000368671 CRHR1P34998 444 aa9.2□□□□□ -0.94
CLRN3-201ENST00000368671 HPCAL1P37235 193 aa9.2□□□□□ -0.94
CLRN3-201ENST00000368671 CDKN1AP38936 164 aa9.2□□□□□ -0.94
CLRN3-201ENST00000368671 EIF1P41567 113 aaKnown RBP9.2□□□□□ -0.94
CLRN3-201ENST00000368671 ASMTP46597 345 aa9.2□□□□□ -0.94
CLRN3-201ENST00000368671 MAP2K3P46734 347 aa9.2□□□□□ -0.94
CLRN3-201ENST00000368671 P2RX1P51575 399 aa9.2□□□□□ -0.94
CLRN3-201ENST00000368671 PCLAFQ15004 111 aa9.2□□□□□ -0.94
CLRN3-201ENST00000368671 RNPS1Q15287 305 aaKnown RBP9.2□□□□□ -0.94
CLRN3-201ENST00000368671 TAB1Q15750 504 aa9.2□□□□□ -0.94
CLRN3-201ENST00000368671 NDUFAF6Q330K2 333 aa9.2□□□□□ -0.94
CLRN3-201ENST00000368671 EXOSC6Q5RKV6 272 aaKnown RBP9.2□□□□□ -0.94
CLRN3-201ENST00000368671 NCMAPQ5T1S8 102 aa9.2□□□□□ -0.94
CLRN3-201ENST00000368671 SFRP5Q5T4F7 317 aa9.2□□□□□ -0.94
CLRN3-201ENST00000368671 KANK2Q63ZY3 851 aa9.2□□□□□ -0.94
CLRN3-201ENST00000368671 CDC73Q6P1J9 531 aa9.2□□□□□ -0.94
CLRN3-201ENST00000368671 CBLN3Q6UW01 205 aa9.2□□□□□ -0.94
CLRN3-201ENST00000368671 TFAP2EQ6VUC0 442 aa9.2□□□□□ -0.94
CLRN3-201ENST00000368671 FCRLAQ7L513 359 aa9.2□□□□□ -0.94
CLRN3-201ENST00000368671 R3HCC1LQ7Z5L2 792 aaKnown RBP9.2□□□□□ -0.94
CLRN3-201ENST00000368671 ATG4DQ86TL0 474 aaPredicted RBP9.2□□□□□ -0.94
CLRN3-201ENST00000368671 CNPY4Q8N129 248 aa9.2□□□□□ -0.94
CLRN3-201ENST00000368671 C4orf33Q8N1A6 199 aa9.2□□□□□ -0.94
CLRN3-201ENST00000368671 SVOPQ8N4V2 548 aa9.2□□□□□ -0.94
CLRN3-201ENST00000368671 TMCO5AQ8N6Q1 288 aa9.2□□□□□ -0.94
CLRN3-201ENST00000368671 ZNF614Q8N883 585 aa9.2□□□□□ -0.94
CLRN3-201ENST00000368671 BANPQ8N9N5 519 aa9.2□□□□□ -0.94
CLRN3-201ENST00000368671 LILRB1Q8NHL6 650 aaPredicted RBP9.2□□□□□ -0.94
CLRN3-201ENST00000368671 RFWD2Q8NHY2 731 aa9.2□□□□□ -0.94
CLRN3-201ENST00000368671 NEUROG1Q92886 237 aa9.2□□□□□ -0.94
CLRN3-201ENST00000368671 FBXW5Q969U6 566 aa9.2□□□□□ -0.94
CLRN3-201ENST00000368671 MTERF3Q96E29 417 aa9.2□□□□□ -0.94
CLRN3-201ENST00000368671 TRMT61AQ96FX7 289 aaKnown RBP9.2□□□□□ -0.94
CLRN3-201ENST00000368671 STACQ99469 402 aa9.2□□□□□ -0.94
CLRN3-201ENST00000368671 GATA5Q9BWX5 397 aaPredicted RBP9.2□□□□□ -0.94
CLRN3-201ENST00000368671 HDHD5Q9BXW7 423 aa9.2□□□□□ -0.94
CLRN3-201ENST00000368671 PIGUQ9H490 435 aa9.2□□□□□ -0.94
CLRN3-201ENST00000368671 ESRP2Q9H6T0 727 aaKnown RBP9.2□□□□□ -0.94
CLRN3-201ENST00000368671 KLHL13Q9P2N7 655 aa9.2□□□□□ -0.94
CLRN3-201ENST00000368671 GIMAP2Q9UG22 337 aa9.2□□□□□ -0.94
CLRN3-201ENST00000368671 MID2Q9UJV3 735 aa9.2□□□□□ -0.94
CLRN3-201ENST00000368671 CARD8Q9Y2G2 431 aa9.2□□□□□ -0.94
CLRN3-201ENST00000368671 TMED5Q9Y3A6 229 aa9.2□□□□□ -0.94
CLRN3-201ENST00000368671 DNAJC15Q9Y5T4 150 aa9.2□□□□□ -0.94
CLRN3-201ENST00000368671 FLNAP21333 2647 aaKnown RBP9.2□□□□□ -0.94
CLRN3-201ENST00000368671 MTORP42345 2549 aa9.2□□□□□ -0.94
CLRN3-201ENST00000368671 A0A1W2PP18 115 aa9.19□□□□□ -0.94
CLRN3-201ENST00000368671 H3BNH8 94 aa9.19□□□□□ -0.94
CLRN3-201ENST00000368671 GTPBP1O00178 669 aaKnown RBP9.19□□□□□ -0.94
CLRN3-201ENST00000368671 PIP5K1BO14986 540 aa9.19□□□□□ -0.94
CLRN3-201ENST00000368671 SCAMP2O15127 329 aaKnown RBP9.19□□□□□ -0.94
CLRN3-201ENST00000368671 PRKD3O94806 890 aa9.19□□□□□ -0.94
CLRN3-201ENST00000368671 HSPA4LO95757 839 aa9.19□□□□□ -0.94
CLRN3-201ENST00000368671 CHRNGP07510 517 aa9.19□□□□□ -0.94
CLRN3-201ENST00000368671 SOD3P08294 240 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 109.9 ms