RNA–Protein interactions for RNA: ENST00000366896.5

PRKN-204, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene PRKN, Length 2,514 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-204ENST00000366896 HIST1H1TP22492 207 aaPredicted RBP13.67□□□□□ -0.22
PRKN-204ENST00000366896 PRKAR1BP31321 381 aa13.67□□□□□ -0.22
PRKN-204ENST00000366896 RAB28P51157 221 aa13.67□□□□□ -0.22
PRKN-204ENST00000366896 ZXDAP98168 799 aa13.67□□□□□ -0.22
PRKN-204ENST00000366896 ZNF155Q12901 538 aaPredicted RBP13.67□□□□□ -0.22
PRKN-204ENST00000366896 EXOSC2Q13868 293 aaKnown RBP13.67□□□□□ -0.22
PRKN-204ENST00000366896 FGFBP1Q14512 234 aa13.67□□□□□ -0.22
PRKN-204ENST00000366896 INSL4Q14641 139 aa13.67□□□□□ -0.22
PRKN-204ENST00000366896 PIP5KL1Q5T9C9 394 aa13.67□□□□□ -0.22
PRKN-204ENST00000366896 LHFPL3Q86UP9 236 aa13.67□□□□□ -0.22
PRKN-204ENST00000366896 ACOT11Q8WXI4 607 aaPredicted RBP13.67□□□□□ -0.22
PRKN-204ENST00000366896 FAM46AQ96IP4 442 aaKnown RBP13.67□□□□□ -0.22
PRKN-204ENST00000366896 FERD3LQ96RJ6 166 aa13.67□□□□□ -0.22
PRKN-204ENST00000366896 ZNF649Q9BS31 505 aa13.67□□□□□ -0.22
PRKN-204ENST00000366896 PRDM7Q9NQW5 492 aa13.67□□□□□ -0.22
PRKN-204ENST00000366896 CYSLTR2Q9NS75 346 aa13.67□□□□□ -0.22
PRKN-204ENST00000366896 SEMA4GQ9NTN9 838 aa13.67□□□□□ -0.22
PRKN-204ENST00000366896 CES1P1Q9UKY3 287 aa13.67□□□□□ -0.22
PRKN-204ENST00000366896 NTNG1Q9Y2I2 539 aa13.67□□□□□ -0.22
PRKN-204ENST00000366896 ATG4BQ9Y4P1 393 aa13.67□□□□□ -0.22
PRKN-204ENST00000366896 OR1A2Q9Y585 309 aa13.67□□□□□ -0.22
PRKN-204ENST00000366896 C2orf92A0A1B0GVN3 265 aa13.67□□□□□ -0.22
PRKN-204ENST00000366896 A0A1W2PR48 441 aa13.67□□□□□ -0.22
PRKN-204ENST00000366896 TSPAN9O75954 239 aa13.67□□□□□ -0.22
PRKN-204ENST00000366896 CH25HO95992 272 aa13.67□□□□□ -0.22
PRKN-204ENST00000366896 CELP19835 753 aa13.67□□□□□ -0.22
PRKN-204ENST00000366896 CDH11P55287 796 aa13.67□□□□□ -0.22
PRKN-204ENST00000366896 ZNF311Q5JNZ3 666 aa13.67□□□□□ -0.22
PRKN-204ENST00000366896 AGBL4Q5VU57 503 aa13.67□□□□□ -0.22
PRKN-204ENST00000366896 C18orf63Q68DL7 685 aa13.67□□□□□ -0.22
PRKN-204ENST00000366896 ABHD17CQ6PCB6 329 aa13.67□□□□□ -0.22
PRKN-204ENST00000366896 TMEM91Q6ZNR0 172 aa13.67□□□□□ -0.22
PRKN-204ENST00000366896 VRK2Q86Y07 508 aa13.67□□□□□ -0.22
PRKN-204ENST00000366896 SRFBP1Q8NEF9 429 aaKnown RBP13.67□□□□□ -0.22
PRKN-204ENST00000366896 OR5M3Q8NGP4 307 aa13.67□□□□□ -0.22
PRKN-204ENST00000366896 OR2L8Q8NGY9 312 aa13.67□□□□□ -0.22
PRKN-204ENST00000366896 MS4A6EQ96DS6 147 aa13.67□□□□□ -0.22
PRKN-204ENST00000366896 INSM2Q96T92 566 aaPredicted RBP13.67□□□□□ -0.22
PRKN-204ENST00000366896 DPCDQ9BVM2 203 aaPredicted RBP13.67□□□□□ -0.22
PRKN-204ENST00000366896 TEX101Q9BY14 249 aa13.67□□□□□ -0.22
PRKN-204ENST00000366896 OSGEPL1Q9H4B0 414 aa13.67□□□□□ -0.22
PRKN-204ENST00000366896 SYNPO2LQ9H987 977 aa13.67□□□□□ -0.22
PRKN-204ENST00000366896 EQTNQ9NQ60 294 aa13.67□□□□□ -0.22
PRKN-204ENST00000366896 ZNF224Q9NZL3 707 aa13.67□□□□□ -0.22
PRKN-204ENST00000366896 SERGEFQ9UGK8 458 aa13.67□□□□□ -0.22
PRKN-204ENST00000366896 CBLCQ9ULV8 474 aa13.67□□□□□ -0.22
PRKN-204ENST00000366896 ENTPD4Q9Y227 616 aa13.67□□□□□ -0.22
PRKN-204ENST00000366896 CACNG2Q9Y698 323 aa13.67□□□□□ -0.22
PRKN-204ENST00000366896 TRAV6A0A075B6T7 132 aa13.66□□□□□ -0.22
PRKN-204ENST00000366896 A0A1W2PP55 124 aa13.66□□□□□ -0.22
PRKN-204ENST00000366896 GSAPA4D1B5 854 aa13.66□□□□□ -0.22
PRKN-204ENST00000366896 SURF4O15260 269 aa13.66□□□□□ -0.22
PRKN-204ENST00000366896 RRASP10301 218 aa13.66□□□□□ -0.22
PRKN-204ENST00000366896 ACP5P13686 325 aa13.66□□□□□ -0.22
PRKN-204ENST00000366896 CSNK2A2P19784 350 aaPredicted RBP13.66□□□□□ -0.22
PRKN-204ENST00000366896 CXCL3P19876 107 aa13.66□□□□□ -0.22
PRKN-204ENST00000366896 PTNP21246 168 aa13.66□□□□□ -0.22
PRKN-204ENST00000366896 AHCYP23526 432 aa13.66□□□□□ -0.22
PRKN-204ENST00000366896 HSF2Q03933 536 aa13.66□□□□□ -0.22
PRKN-204ENST00000366896 SUZ12Q15022 739 aaKnown RBP13.66□□□□□ -0.22
PRKN-204ENST00000366896 LGALSLQ3ZCW2 172 aaPredicted RBP13.66□□□□□ -0.22
PRKN-204ENST00000366896 VASNQ6EMK4 673 aa13.66□□□□□ -0.22
PRKN-204ENST00000366896 SLC48A1Q6P1K1 146 aa13.66□□□□□ -0.22
PRKN-204ENST00000366896 SYT13Q7L8C5 426 aa13.66□□□□□ -0.22
PRKN-204ENST00000366896 BMP8AQ7Z5Y6 402 aa13.66□□□□□ -0.22
PRKN-204ENST00000366896 LUZP2Q86TE4 346 aa13.66□□□□□ -0.22
PRKN-204ENST00000366896 CDH24Q86UP0 819 aa13.66□□□□□ -0.22
PRKN-204ENST00000366896 LRRC28Q86X40 367 aaPredicted RBP13.66□□□□□ -0.22
PRKN-204ENST00000366896 HDDC3Q8N4P3 179 aa13.66□□□□□ -0.22
PRKN-204ENST00000366896 FAM131CQ96AQ9 280 aa13.66□□□□□ -0.22
PRKN-204ENST00000366896 MRGPRX1Q96LB2 322 aa13.66□□□□□ -0.22
PRKN-204ENST00000366896 C12orf66Q96MD2 445 aa13.66□□□□□ -0.22
PRKN-204ENST00000366896 OR2M2Q96R28 347 aa13.66□□□□□ -0.22
PRKN-204ENST00000366896 OR51J1Q9H342 316 aa13.66□□□□□ -0.22
PRKN-204ENST00000366896 LIN7BQ9HAP6 207 aa13.66□□□□□ -0.22
PRKN-204ENST00000366896 MBNL1Q9NR56 388 aaKnown RBP13.66□□□□□ -0.22
PRKN-204ENST00000366896 IMP3Q9NV31 184 aaKnown RBP13.66□□□□□ -0.22
PRKN-204ENST00000366896 NUDT15Q9NV35 164 aa13.66□□□□□ -0.22
PRKN-204ENST00000366896 C2orf42Q9NWW7 574 aa13.66□□□□□ -0.22
PRKN-204ENST00000366896 SLC13A4Q9UKG4 626 aa13.66□□□□□ -0.22
PRKN-204ENST00000366896 TCRBV21S2A2A0A5A6 115 aa13.66□□□□□ -0.22
PRKN-204ENST00000366896 CD8B2A6NJW9 211 aa13.66□□□□□ -0.22
PRKN-204ENST00000366896 ERI3O43414 337 aaKnown RBP13.66□□□□□ -0.22
PRKN-204ENST00000366896 MPC2O95563 127 aa13.66□□□□□ -0.22
PRKN-204ENST00000366896 AIFM1O95831 613 aa13.66□□□□□ -0.22
PRKN-204ENST00000366896 CD8BP10966 210 aa13.66□□□□□ -0.22
PRKN-204ENST00000366896 GNSP15586 552 aa13.66□□□□□ -0.22
PRKN-204ENST00000366896 NDUFV2P19404 249 aa13.66□□□□□ -0.22
PRKN-204ENST00000366896 ATP5A1P25705 553 aaKnown RBP13.66□□□□□ -0.22
PRKN-204ENST00000366896 HTR1FP30939 366 aa13.66□□□□□ -0.22
PRKN-204ENST00000366896 TRHRP34981 398 aaPredicted RBP13.66□□□□□ -0.22
PRKN-204ENST00000366896 TGM3Q08188 693 aa13.66□□□□□ -0.22
PRKN-204ENST00000366896 GALEQ14376 348 aa13.66□□□□□ -0.22
PRKN-204ENST00000366896 NTRK2Q16620 822 aa13.66□□□□□ -0.22
PRKN-204ENST00000366896 SLC30A6Q6NXT4 461 aa13.66□□□□□ -0.22
PRKN-204ENST00000366896 FAM122CQ6P4D5 195 aa13.66□□□□□ -0.22
PRKN-204ENST00000366896 PRSS42Q7Z5A4 293 aa13.66□□□□□ -0.22
PRKN-204ENST00000366896 GPAT4Q86UL3 456 aa13.66□□□□□ -0.22
PRKN-204ENST00000366896 NR2C2APQ86WQ0 139 aa13.66□□□□□ -0.22
PRKN-204ENST00000366896 ADGRG3Q86Y34 549 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms