RNA–Protein interactions for RNA: ENST00000361309.5

CD47-202, Transcript of CD47 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD47, Length 1,285 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-202ENST00000361309 GP6Q9HCN6 339 aa18.73■□□□□ 0.59
CD47-202ENST00000361309 ACSS1Q9NUB1 689 aaPredicted RBP18.73■□□□□ 0.59
CD47-202ENST00000361309 GJE1A6NN92 205 aa18.72■□□□□ 0.59
CD47-202ENST00000361309 SLC28A1O00337 649 aa18.72■□□□□ 0.59
CD47-202ENST00000361309 OIP5O43482 229 aa18.72■□□□□ 0.59
CD47-202ENST00000361309 RAMP1O60894 148 aa18.72■□□□□ 0.59
CD47-202ENST00000361309 FESP07332 822 aa18.72■□□□□ 0.59
CD47-202ENST00000361309 SDC1P18827 310 aa18.72■□□□□ 0.59
CD47-202ENST00000361309 RNF144AP50876 292 aaPredicted RBP18.72■□□□□ 0.59
CD47-202ENST00000361309 EXOSC6Q5RKV6 272 aaKnown RBP18.72■□□□□ 0.59
CD47-202ENST00000361309 CBLN3Q6UW01 205 aa18.72■□□□□ 0.59
CD47-202ENST00000361309 TDRPQ86YL5 185 aa18.72■□□□□ 0.59
CD47-202ENST00000361309 CLHC1Q8NHS4 586 aa18.72■□□□□ 0.59
CD47-202ENST00000361309 MZB1Q8WU39 189 aa18.72■□□□□ 0.59
CD47-202ENST00000361309 CHMP6Q96FZ7 201 aa18.72■□□□□ 0.59
CD47-202ENST00000361309 CCT7Q99832 543 aa18.72■□□□□ 0.59
CD47-202ENST00000361309 USB1Q9BQ65 265 aaKnown RBP18.72■□□□□ 0.59
CD47-202ENST00000361309 BTBD2Q9BX70 525 aa18.72■□□□□ 0.59
CD47-202ENST00000361309 ALG2Q9H553 416 aa18.72■□□□□ 0.59
CD47-202ENST00000361309 COQ10BQ9H8M1 238 aa18.72■□□□□ 0.59
CD47-202ENST00000361309 GIN1Q9NXP7 522 aa18.72■□□□□ 0.59
CD47-202ENST00000361309 CISD1Q9NZ45 108 aaKnown RBP18.72■□□□□ 0.59
CD47-202ENST00000361309 TBK1Q9UHD2 729 aa18.72■□□□□ 0.59
CD47-202ENST00000361309 BAIAP2L1Q9UHR4 511 aa18.72■□□□□ 0.59
CD47-202ENST00000361309 IGHV3-15A0A0B4J1V0 119 aa18.71■□□□□ 0.59
CD47-202ENST00000361309 RIPK2O43353 540 aa18.71■□□□□ 0.59
CD47-202ENST00000361309 RGS14O43566 566 aa18.71■□□□□ 0.59
CD47-202ENST00000361309 HSPA4LO95757 839 aa18.71■□□□□ 0.59
CD47-202ENST00000361309 PROCP04070 461 aa18.71■□□□□ 0.59
CD47-202ENST00000361309 ENPP1P22413 925 aa18.71■□□□□ 0.59
CD47-202ENST00000361309 PDE7AQ13946 482 aa18.71■□□□□ 0.59
CD47-202ENST00000361309 TOMM34Q15785 309 aaPredicted RBP18.71■□□□□ 0.59
CD47-202ENST00000361309 LRIG3Q6UXM1 1119 aa18.71■□□□□ 0.59
CD47-202ENST00000361309 Q6ZSR9 355 aa18.71■□□□□ 0.59
CD47-202ENST00000361309 MTERF4Q7Z6M4 381 aaKnown RBP18.71■□□□□ 0.59
CD47-202ENST00000361309 SLC43A2Q8N370 569 aa18.71■□□□□ 0.59
CD47-202ENST00000361309 OR2T11Q8NH01 316 aa18.71■□□□□ 0.59
CD47-202ENST00000361309 ZFP90Q8TF47 636 aa18.71■□□□□ 0.59
CD47-202ENST00000361309 CDS1Q92903 461 aa18.71■□□□□ 0.59
CD47-202ENST00000361309 FAM120BQ96EK7 910 aaKnown RBP18.71■□□□□ 0.59
CD47-202ENST00000361309 FCRL1Q96LA6 429 aa18.71■□□□□ 0.59
CD47-202ENST00000361309 BARX1Q9HBU1 254 aaPredicted RBP18.71■□□□□ 0.59
CD47-202ENST00000361309 PSMC3IPQ9P2W1 217 aaPredicted RBP18.71■□□□□ 0.59
CD47-202ENST00000361309 PRSS50Q9UI38 385 aa18.71■□□□□ 0.59
CD47-202ENST00000361309 CARD8Q9Y2G2 431 aa18.71■□□□□ 0.59
CD47-202ENST00000361309 NPIPA5A0A0B4J1W7 369 aa18.7■□□□□ 0.58
CD47-202ENST00000361309 A0A1W2PPM1 405 aa18.7■□□□□ 0.58
CD47-202ENST00000361309 A8MV72 311 aaPredicted RBP18.7■□□□□ 0.58
CD47-202ENST00000361309 NPIPA7E9PJI5 369 aa18.7■□□□□ 0.58
CD47-202ENST00000361309 GLRA3O75311 464 aa18.7■□□□□ 0.58
CD47-202ENST00000361309 LYZL6O75951 148 aa18.7■□□□□ 0.58
CD47-202ENST00000361309 HMGN2P05204 90 aaKnown RBP18.7■□□□□ 0.58
CD47-202ENST00000361309 NPIPA8P0DM63 369 aa18.7■□□□□ 0.58
CD47-202ENST00000361309 P2RX1P51575 399 aa18.7■□□□□ 0.58
CD47-202ENST00000361309 C21orf58P58505 322 aa18.7■□□□□ 0.58
CD47-202ENST00000361309 DNAJB13P59910 316 aa18.7■□□□□ 0.58
CD47-202ENST00000361309 LASP1Q14847 261 aaKnown RBP18.7■□□□□ 0.58
CD47-202ENST00000361309 STK11Q15831 433 aa18.7■□□□□ 0.58
CD47-202ENST00000361309 CHRFAM7AQ494W8 412 aa18.7■□□□□ 0.58
CD47-202ENST00000361309 RFTN2Q52LD8 501 aaPredicted RBP18.7■□□□□ 0.58
CD47-202ENST00000361309 KLHL26Q53HC5 615 aa18.7■□□□□ 0.58
CD47-202ENST00000361309 Q6ZT83 130 aa18.7■□□□□ 0.58
CD47-202ENST00000361309 TRMT10CQ7L0Y3 403 aaKnown RBP18.7■□□□□ 0.58
CD47-202ENST00000361309 DTX2Q86UW9 622 aa18.7■□□□□ 0.58
CD47-202ENST00000361309 CXorf36Q9H7Y0 433 aa18.7■□□□□ 0.58
CD47-202ENST00000361309 DUSP22Q9NRW4 184 aa18.7■□□□□ 0.58
CD47-202ENST00000361309 SIRT3Q9NTG7 399 aaPredicted RBP18.7■□□□□ 0.58
CD47-202ENST00000361309 ZCCHC3Q9NUD5 404 aaKnown RBP18.7■□□□□ 0.58
CD47-202ENST00000361309 ING1Q9UK53 422 aaPredicted RBP18.7■□□□□ 0.58
CD47-202ENST00000361309 ICAM5Q9UMF0 924 aa18.7■□□□□ 0.58
CD47-202ENST00000361309 GPC6Q9Y625 555 aaPredicted RBP18.7■□□□□ 0.58
CD47-202ENST00000361309 SHISA9B4DS77 424 aa18.69■□□□□ 0.58
CD47-202ENST00000361309 KIF2AO00139 706 aaPredicted RBP18.69■□□□□ 0.58
CD47-202ENST00000361309 SSX4O60224 188 aa18.69■□□□□ 0.58
CD47-202ENST00000361309 GPRIN2O60269 458 aa18.69■□□□□ 0.58
CD47-202ENST00000361309 PTNP21246 168 aa18.69■□□□□ 0.58
CD47-202ENST00000361309 ATP6V1C1P21283 382 aa18.69■□□□□ 0.58
CD47-202ENST00000361309 OR3A2P47893 321 aa18.69■□□□□ 0.58
CD47-202ENST00000361309 RPL38P63173 70 aaKnown RBP18.69■□□□□ 0.58
CD47-202ENST00000361309 PPA1Q15181 289 aa18.69■□□□□ 0.58
CD47-202ENST00000361309 NDUFAF6Q330K2 333 aa18.69■□□□□ 0.58
CD47-202ENST00000361309 ZNF527Q8NB42 609 aa18.69■□□□□ 0.58
CD47-202ENST00000361309 GPR119Q8TDV5 335 aa18.69■□□□□ 0.58
CD47-202ENST00000361309 TMEM158Q8WZ71 300 aa18.69■□□□□ 0.58
CD47-202ENST00000361309 STACQ99469 402 aa18.69■□□□□ 0.58
CD47-202ENST00000361309 PSD2Q9BQI7 771 aa18.69■□□□□ 0.58
CD47-202ENST00000361309 RHNO1Q9BSD3 238 aa18.69■□□□□ 0.58
CD47-202ENST00000361309 GRIP2Q9C0E4 1043 aa18.69■□□□□ 0.58
CD47-202ENST00000361309 PIGUQ9H490 435 aa18.69■□□□□ 0.58
CD47-202ENST00000361309 L2HGDHQ9H9P8 463 aa18.69■□□□□ 0.58
CD47-202ENST00000361309 BCO1Q9HAY6 547 aa18.69■□□□□ 0.58
CD47-202ENST00000361309 FAIMQ9NVQ4 179 aa18.69■□□□□ 0.58
CD47-202ENST00000361309 KLHL9Q9P2J3 617 aa18.69■□□□□ 0.58
CD47-202ENST00000361309 FIS1Q9Y3D6 152 aa18.69■□□□□ 0.58
CD47-202ENST00000361309 ACTL7BQ9Y614 415 aa18.69■□□□□ 0.58
CD47-202ENST00000361309 NBEAL1Q6ZS30 2694 aa18.68■□□□□ 0.58
CD47-202ENST00000361309 A0A1W2PNR3 127 aa18.68■□□□□ 0.58
CD47-202ENST00000361309 C9JVG2 144 aa18.68■□□□□ 0.58
CD47-202ENST00000361309 GTPBP1O00178 669 aaKnown RBP18.68■□□□□ 0.58
CD47-202ENST00000361309 PRKCAP17252 672 aa18.68■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms