RNA–Protein interactions for RNA: ENST00000360280.7

VPS13A-203, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13A, Length 15,320 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-203ENST00000360280 METTL27Q8N6F8 245 aaPredicted RBP8.78□□□□□ -1
VPS13A-203ENST00000360280 FGGYQ96C11 551 aa8.78□□□□□ -1
VPS13A-203ENST00000360280 RADILQ96JH8 1075 aa8.78□□□□□ -1
VPS13A-203ENST00000360280 EHFQ9NZC4 300 aa8.78□□□□□ -1
VPS13A-203ENST00000360280 ZNF230Q9UIE0 474 aaPredicted RBP8.78□□□□□ -1
VPS13A-203ENST00000360280 DUSP11O75319 330 aaKnown RBP8.78□□□□□ -1
VPS13A-203ENST00000360280 ALDOAP04075 364 aaKnown RBP8.78□□□□□ -1
VPS13A-203ENST00000360280 IL1R2P27930 398 aa8.78□□□□□ -1
VPS13A-203ENST00000360280 AKR1C1Q04828 323 aa8.78□□□□□ -1
VPS13A-203ENST00000360280 CTSL3PQ5NE16 218 aa8.78□□□□□ -1
VPS13A-203ENST00000360280 APOOLQ6UXV4 268 aa8.78□□□□□ -1
VPS13A-203ENST00000360280 LSMEM2Q8N112 164 aa8.78□□□□□ -1
VPS13A-203ENST00000360280 SMIM3Q9BZL3 60 aa8.78□□□□□ -1
VPS13A-203ENST00000360280 RPH3ALQ9UNE2 315 aa8.78□□□□□ -1
VPS13A-203ENST00000360280 HS3ST4Q9Y661 456 aa8.78□□□□□ -1
VPS13A-203ENST00000360280 LILRB3O75022 631 aa8.78□□□□□ -1
VPS13A-203ENST00000360280 JUNDP17535 347 aa8.78□□□□□ -1
VPS13A-203ENST00000360280 LAP3P28838 519 aa8.78□□□□□ -1
VPS13A-203ENST00000360280 PCBD1P61457 104 aa8.78□□□□□ -1
VPS13A-203ENST00000360280 MRPL10Q7Z7H8 261 aaKnown RBP8.78□□□□□ -1
VPS13A-203ENST00000360280 CMTM2Q8TAZ6 248 aa8.78□□□□□ -1
VPS13A-203ENST00000360280 SLC2A8Q9NY64 477 aa8.78□□□□□ -1
VPS13A-203ENST00000360280 ANKRD30BLA7E2S9 258 aa8.78□□□□□ -1
VPS13A-203ENST00000360280 KIAA0355O15063 1070 aa8.78□□□□□ -1
VPS13A-203ENST00000360280 GPR39O43194 453 aa8.78□□□□□ -1
VPS13A-203ENST00000360280 TYROBPO43914 113 aa8.78□□□□□ -1
VPS13A-203ENST00000360280 GGT5P36269 586 aa8.78□□□□□ -1
VPS13A-203ENST00000360280 CATR1Q13166 79 aa8.78□□□□□ -1
VPS13A-203ENST00000360280 MS4A13Q5J8X5 152 aa8.78□□□□□ -1
VPS13A-203ENST00000360280 OGFOD3Q6PK18 319 aa8.78□□□□□ -1
VPS13A-203ENST00000360280 PXYLP1Q8TE99 480 aa8.78□□□□□ -1
VPS13A-203ENST00000360280 GINS3Q9BRX5 216 aa8.78□□□□□ -1
VPS13A-203ENST00000360280 EVA1AQ9H8M9 152 aa8.78□□□□□ -1
VPS13A-203ENST00000360280 UBR2Q8IWV8 1755 aa8.78□□□□□ -1
VPS13A-203ENST00000360280 PLCXD3Q63HM9 321 aa8.78□□□□□ -1
VPS13A-203ENST00000360280 OR4K5Q8NGD3 323 aa8.78□□□□□ -1
VPS13A-203ENST00000360280 OR52H1Q8NGJ2 320 aa8.78□□□□□ -1
VPS13A-203ENST00000360280 LINC01599Q8WXQ3 324 aa8.78□□□□□ -1
VPS13A-203ENST00000360280 ZCCHC4Q9H5U6 513 aa8.78□□□□□ -1
VPS13A-203ENST00000360280 C1GALT1C1LP0DN25 315 aa8.78□□□□□ -1
VPS13A-203ENST00000360280 CNR2P34972 360 aa8.78□□□□□ -1
VPS13A-203ENST00000360280 OR4D2P58180 307 aa8.78□□□□□ -1
VPS13A-203ENST00000360280 MR1Q95460 341 aa8.78□□□□□ -1
VPS13A-203ENST00000360280 MYADMQ96S97 322 aa8.78□□□□□ -1
VPS13A-203ENST00000360280 INTS14Q96SY0 518 aa8.78□□□□□ -1
VPS13A-203ENST00000360280 V9GY05 133 aa8.78□□□□□ -1
VPS13A-203ENST00000360280 DDNO94850 711 aaPredicted RBP8.77□□□□□ -1
VPS13A-203ENST00000360280 MPIG6BO95866 241 aa8.77□□□□□ -1
VPS13A-203ENST00000360280 MMP2P08253 660 aa8.77□□□□□ -1
VPS13A-203ENST00000360280 FOLR1P15328 257 aa8.77□□□□□ -1
VPS13A-203ENST00000360280 GABRA5P31644 462 aa8.77□□□□□ -1
VPS13A-203ENST00000360280 FAM110CQ1W6H9 321 aa8.77□□□□□ -1
VPS13A-203ENST00000360280 MANEALQ5VSG8 457 aa8.77□□□□□ -1
VPS13A-203ENST00000360280 FJX1Q86VR8 437 aa8.77□□□□□ -1
VPS13A-203ENST00000360280 NRMQ8IXM6 262 aa8.77□□□□□ -1
VPS13A-203ENST00000360280 RHBDD3Q9Y3P4 386 aa8.77□□□□□ -1
VPS13A-203ENST00000360280 MC3RP41968 323 aa8.77□□□□□ -1
VPS13A-203ENST00000360280 TGFBR3Q03167 851 aa8.77□□□□□ -1
VPS13A-203ENST00000360280 SOWAHAQ2M3V2 549 aa8.77□□□□□ -1
VPS13A-203ENST00000360280 NHLRC2Q8NBF2 726 aa8.77□□□□□ -1
VPS13A-203ENST00000360280 M1APQ8TC57 530 aa8.77□□□□□ -1
VPS13A-203ENST00000360280 HHIPL1Q96JK4 782 aa8.77□□□□□ -1
VPS13A-203ENST00000360280 RBM24Q9BX46 236 aaKnown RBP8.77□□□□□ -1
VPS13A-203ENST00000360280 SLC2A6Q9UGQ3 507 aa8.77□□□□□ -1
VPS13A-203ENST00000360280 GABRR1P24046 479 aa8.77□□□□□ -1
VPS13A-203ENST00000360280 MPPED2Q15777 294 aa8.77□□□□□ -1
VPS13A-203ENST00000360280 FAM69BQ5VUD6 431 aa8.77□□□□□ -1
VPS13A-203ENST00000360280 NUDT19A8MXV4 375 aa8.77□□□□□ -1.01
VPS13A-203ENST00000360280 ITGAMP11215 1152 aa8.77□□□□□ -1.01
VPS13A-203ENST00000360280 CDK5R2Q13319 367 aa8.77□□□□□ -1.01
VPS13A-203ENST00000360280 NSDHLQ15738 373 aa8.77□□□□□ -1.01
VPS13A-203ENST00000360280 OR4C11Q6IEV9 310 aa8.77□□□□□ -1.01
VPS13A-203ENST00000360280 OR5H6Q8NGV6 325 aa8.77□□□□□ -1.01
VPS13A-203ENST00000360280 OR10K1Q8NGX5 313 aa8.77□□□□□ -1.01
VPS13A-203ENST00000360280 A0A1W2PRU2 124 aa8.77□□□□□ -1.01
VPS13A-203ENST00000360280 RNF225M0QZC1 329 aaPredicted RBP8.77□□□□□ -1.01
VPS13A-203ENST00000360280 OR2T1O43869 369 aa8.77□□□□□ -1.01
VPS13A-203ENST00000360280 NSA2O95478 260 aaKnown RBP8.77□□□□□ -1.01
VPS13A-203ENST00000360280 MT-ND4LP03901 98 aa8.77□□□□□ -1.01
VPS13A-203ENST00000360280 BMP4P12644 408 aa8.77□□□□□ -1.01
VPS13A-203ENST00000360280 ANXA7P20073 488 aaKnown RBP8.77□□□□□ -1.01
VPS13A-203ENST00000360280 TAGLN2P37802 199 aaKnown RBP8.77□□□□□ -1.01
VPS13A-203ENST00000360280 GRB2P62993 217 aaKnown RBP8.77□□□□□ -1.01
VPS13A-203ENST00000360280 TMEM151BQ8IW70 566 aa8.77□□□□□ -1.01
VPS13A-203ENST00000360280 NKX3-1Q99801 234 aaPredicted RBP8.77□□□□□ -1.01
VPS13A-203ENST00000360280 SEC22CQ9BRL7 303 aa8.77□□□□□ -1.01
VPS13A-203ENST00000360280 PURGQ9UJV8 347 aaKnown RBP8.77□□□□□ -1.01
VPS13A-203ENST00000360280 TAS2R38P59533 333 aa8.77□□□□□ -1.01
VPS13A-203ENST00000360280 TREML2Q5T2D2 321 aa8.77□□□□□ -1.01
VPS13A-203ENST00000360280 SYPL2Q5VXT5 272 aa8.77□□□□□ -1.01
VPS13A-203ENST00000360280 PARP16Q8N5Y8 322 aa8.77□□□□□ -1.01
VPS13A-203ENST00000360280 GATSQ8NAP1 163 aa8.77□□□□□ -1.01
VPS13A-203ENST00000360280 OR56B1Q8NGI3 324 aa8.77□□□□□ -1.01
VPS13A-203ENST00000360280 LMX1AQ8TE12 382 aa8.77□□□□□ -1.01
VPS13A-203ENST00000360280 TPPP3Q9BW30 176 aa8.77□□□□□ -1.01
VPS13A-203ENST00000360280 HCAR1Q9BXC0 346 aa8.77□□□□□ -1.01
VPS13A-203ENST00000360280 TIAM2Q8IVF5 1701 aa8.77□□□□□ -1.01
VPS13A-203ENST00000360280 COL5A2P05997 1499 aaPredicted RBP8.77□□□□□ -1.01
VPS13A-203ENST00000360280 DCDC2BA2VCK2 349 aa8.77□□□□□ -1.01
VPS13A-203ENST00000360280 SURF4O15260 269 aa8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms