RNA–Protein interactions for RNA: ENST00000358771.4

SIRPA-202, Transcript of signal regulatory protein alpha, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SIRPA, Length 3,996 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPA-202ENST00000358771 C11orf88Q6PI97 169 aa13.24□□□□□ -0.29
SIRPA-202ENST00000358771 PAQR7Q86WK9 346 aa13.24□□□□□ -0.29
SIRPA-202ENST00000358771 LRRN3Q9H3W5 708 aa13.24□□□□□ -0.29
SIRPA-202ENST00000358771 TCF7L1Q9HCS4 588 aa13.24□□□□□ -0.29
SIRPA-202ENST00000358771 SPTBN2O15020 2390 aa13.24□□□□□ -0.29
SIRPA-202ENST00000358771 TRBV2A0A0J9YWF9 115 aa13.24□□□□□ -0.29
SIRPA-202ENST00000358771 HYKKA2RU49 373 aa13.24□□□□□ -0.29
SIRPA-202ENST00000358771 F8A1P23610 371 aa13.24□□□□□ -0.29
SIRPA-202ENST00000358771 CD6P30203 668 aa13.24□□□□□ -0.29
SIRPA-202ENST00000358771 GRK5P34947 590 aa13.24□□□□□ -0.29
SIRPA-202ENST00000358771 TRHRP34981 398 aaPredicted RBP13.24□□□□□ -0.29
SIRPA-202ENST00000358771 GUCA1AP43080 201 aaPredicted RBP13.24□□□□□ -0.29
SIRPA-202ENST00000358771 KIR2DL1P43626 348 aaPredicted RBP13.24□□□□□ -0.29
SIRPA-202ENST00000358771 CNIH2Q6PI25 160 aa13.24□□□□□ -0.29
SIRPA-202ENST00000358771 RASSF6Q6ZTQ3 369 aa13.24□□□□□ -0.29
SIRPA-202ENST00000358771 MOSPD2Q8NHP6 518 aa13.24□□□□□ -0.29
SIRPA-202ENST00000358771 ZDHHC12Q96GR4 267 aa13.24□□□□□ -0.29
SIRPA-202ENST00000358771 G6PC3Q9BUM1 346 aa13.24□□□□□ -0.29
SIRPA-202ENST00000358771 CDADC1Q9BWV3 514 aa13.24□□□□□ -0.29
SIRPA-202ENST00000358771 POU2F3Q9UKI9 436 aa13.24□□□□□ -0.29
SIRPA-202ENST00000358771 NOTCH4Q99466 2003 aa13.24□□□□□ -0.29
SIRPA-202ENST00000358771 EPOPA6NHQ4 379 aa13.24□□□□□ -0.29
SIRPA-202ENST00000358771 MAGEB4O15481 346 aaPredicted RBP13.24□□□□□ -0.29
SIRPA-202ENST00000358771 HPGDSO60760 199 aa13.24□□□□□ -0.29
SIRPA-202ENST00000358771 ADAM23O75077 832 aa13.24□□□□□ -0.29
SIRPA-202ENST00000358771 GABRG2P18507 467 aa13.24□□□□□ -0.29
SIRPA-202ENST00000358771 NR0B1P51843 470 aaKnown RBP13.24□□□□□ -0.29
SIRPA-202ENST00000358771 C21orf58P58505 322 aa13.24□□□□□ -0.29
SIRPA-202ENST00000358771 BTG2P78543 158 aa13.24□□□□□ -0.29
SIRPA-202ENST00000358771 KCNAB1Q14722 419 aa13.24□□□□□ -0.29
SIRPA-202ENST00000358771 TBRG1Q3YBR2 411 aa13.24□□□□□ -0.29
SIRPA-202ENST00000358771 CELF2-AS1Q8N7Q2 184 aa13.24□□□□□ -0.29
SIRPA-202ENST00000358771 SLIRPQ9GZT3 109 aaKnown RBP13.24□□□□□ -0.29
SIRPA-202ENST00000358771 HINT3Q9NQE9 182 aaKnown RBP13.24□□□□□ -0.29
SIRPA-202ENST00000358771 ENAMQ9NRM1 1142 aa13.24□□□□□ -0.29
SIRPA-202ENST00000358771 C14orf105Q9NVL8 296 aa13.24□□□□□ -0.29
SIRPA-202ENST00000358771 FTSJ1Q9UET6 329 aa13.24□□□□□ -0.29
SIRPA-202ENST00000358771 HEATR5BQ9P2D3 2071 aa13.24□□□□□ -0.29
SIRPA-202ENST00000358771 OR6C70A6NIJ9 312 aa13.23□□□□□ -0.29
SIRPA-202ENST00000358771 TRIM64CA6NLI5 447 aa13.23□□□□□ -0.29
SIRPA-202ENST00000358771 CD38P28907 300 aa13.23□□□□□ -0.29
SIRPA-202ENST00000358771 PRKAR1BP31321 381 aa13.23□□□□□ -0.29
SIRPA-202ENST00000358771 SOX18P35713 384 aa13.23□□□□□ -0.29
SIRPA-202ENST00000358771 EIF2B5Q13144 721 aaKnown RBP13.23□□□□□ -0.29
SIRPA-202ENST00000358771 KIAA0895LQ68EN5 471 aa13.23□□□□□ -0.29
SIRPA-202ENST00000358771 MBOAT2Q6ZWT7 520 aa13.23□□□□□ -0.29
SIRPA-202ENST00000358771 C4orf36Q96KX1 117 aa13.23□□□□□ -0.29
SIRPA-202ENST00000358771 OPALINQ96PE5 141 aa13.23□□□□□ -0.29
SIRPA-202ENST00000358771 MKL2Q9ULH7 1088 aa13.23□□□□□ -0.29
SIRPA-202ENST00000358771 A0A1B0GWA3 101 aa13.23□□□□□ -0.29
SIRPA-202ENST00000358771 EEF1E1O43324 174 aaKnown RBP13.23□□□□□ -0.29
SIRPA-202ENST00000358771 DNAJB6O75190 326 aa13.23□□□□□ -0.29
SIRPA-202ENST00000358771 KIAA1024LP59773 190 aa13.23□□□□□ -0.29
SIRPA-202ENST00000358771 HIST2H2ABQ8IUE6 130 aaPredicted RBP13.23□□□□□ -0.29
SIRPA-202ENST00000358771 LYSMD2Q8IV50 215 aa13.23□□□□□ -0.29
SIRPA-202ENST00000358771 TMEM151BQ8IW70 566 aa13.23□□□□□ -0.29
SIRPA-202ENST00000358771 CADM3Q8N126 398 aa13.23□□□□□ -0.29
SIRPA-202ENST00000358771 C19orf47Q8N9M1 422 aaKnown RBP13.23□□□□□ -0.29
SIRPA-202ENST00000358771 FRMD6Q96NE9 622 aa13.23□□□□□ -0.29
SIRPA-202ENST00000358771 ZNF559Q9BR84 538 aa13.23□□□□□ -0.29
SIRPA-202ENST00000358771 RPRD1BQ9NQG5 326 aaKnown RBP13.23□□□□□ -0.29
SIRPA-202ENST00000358771 GRHPRQ9UBQ7 328 aa13.23□□□□□ -0.29
SIRPA-202ENST00000358771 PRODH2Q9UF12 536 aa13.23□□□□□ -0.29
SIRPA-202ENST00000358771 B3GNT3Q9Y2A9 372 aa13.23□□□□□ -0.29
SIRPA-202ENST00000358771 SYT5O00445 386 aa13.23□□□□□ -0.29
SIRPA-202ENST00000358771 RAD1O60671 282 aa13.23□□□□□ -0.29
SIRPA-202ENST00000358771 AK1P00568 194 aa13.23□□□□□ -0.29
SIRPA-202ENST00000358771 EIF1AXP47813 144 aaKnown RBP13.23□□□□□ -0.29
SIRPA-202ENST00000358771 HNRNPKP61978 463 aaKnown RBP eCLIP13.23□□□□□ -0.29
SIRPA-202ENST00000358771 SNRPGP62308 76 aaKnown RBP13.23□□□□□ -0.29
SIRPA-202ENST00000358771 CD300CQ08708 224 aa13.23□□□□□ -0.29
SIRPA-202ENST00000358771 SLC29A4Q7RTT9 530 aa13.23□□□□□ -0.29
SIRPA-202ENST00000358771 LRRC17Q8N6Y2 441 aa13.23□□□□□ -0.29
SIRPA-202ENST00000358771 OR4N2Q8NGD1 307 aa13.23□□□□□ -0.29
SIRPA-202ENST00000358771 SMPDL3BQ92485 455 aa13.23□□□□□ -0.29
SIRPA-202ENST00000358771 MROQ9BYG7 248 aa13.23□□□□□ -0.29
SIRPA-202ENST00000358771 CENPMQ9NSP4 180 aa13.23□□□□□ -0.29
SIRPA-202ENST00000358771 MRPL39Q9NYK5 338 aaKnown RBP13.23□□□□□ -0.29
SIRPA-202ENST00000358771 SERTAD3Q9UJW9 196 aa13.23□□□□□ -0.29
SIRPA-202ENST00000358771 PCDHGB1Q9Y5G3 927 aa13.23□□□□□ -0.29
SIRPA-202ENST00000358771 DOCK9Q9BZ29 2069 aa13.22□□□□□ -0.29
SIRPA-202ENST00000358771 IQCMA0A1B0GVH7 501 aa13.22□□□□□ -0.29
SIRPA-202ENST00000358771 PRAMEF2O60811 474 aa13.22□□□□□ -0.29
SIRPA-202ENST00000358771 DHFRP00374 187 aa13.22□□□□□ -0.29
SIRPA-202ENST00000358771 APEX1P27695 318 aaKnown RBP13.22□□□□□ -0.29
SIRPA-202ENST00000358771 GRM7Q14831 915 aa13.22□□□□□ -0.29
SIRPA-202ENST00000358771 DHRS4L2Q6PKH6 230 aa13.22□□□□□ -0.29
SIRPA-202ENST00000358771 GDPGP1Q6ZNW5 385 aa13.22□□□□□ -0.29
SIRPA-202ENST00000358771 C1orf216Q8TAB5 229 aa13.22□□□□□ -0.29
SIRPA-202ENST00000358771 OR2A14Q96R47 310 aa13.22□□□□□ -0.29
SIRPA-202ENST00000358771 FN3KQ9H479 309 aa13.22□□□□□ -0.29
SIRPA-202ENST00000358771 LHX9Q9NQ69 397 aa13.22□□□□□ -0.29
SIRPA-202ENST00000358771 ING3Q9NXR8 418 aa13.22□□□□□ -0.29
SIRPA-202ENST00000358771 WSB2Q9NYS7 404 aaPredicted RBP13.22□□□□□ -0.29
SIRPA-202ENST00000358771 MRPL15Q9P015 296 aaKnown RBP13.22□□□□□ -0.29
SIRPA-202ENST00000358771 SOX1O00570 391 aaPredicted RBP13.22□□□□□ -0.29
SIRPA-202ENST00000358771 F13BP05160 661 aa13.22□□□□□ -0.29
SIRPA-202ENST00000358771 CTXN1P60606 82 aa13.22□□□□□ -0.29
SIRPA-202ENST00000358771 LEG1Q6P5S2 330 aa13.22□□□□□ -0.29
SIRPA-202ENST00000358771 UBE2Q1Q7Z7E8 422 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms