RNA–Protein interactions for RNA: ENST00000358278.7

TPM1-206, Transcript of tropomyosin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TPM1, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-206ENST00000358278 CD247P20963 164 aa13.88□□□□□ -0.19
TPM1-206ENST00000358278 KCNJ5P48544 419 aa13.88□□□□□ -0.19
TPM1-206ENST00000358278 P2RX1P51575 399 aa13.88□□□□□ -0.19
TPM1-206ENST00000358278 PPIAP62937 165 aaKnown RBP13.88□□□□□ -0.19
TPM1-206ENST00000358278 NFATC3Q12968 1075 aa13.88□□□□□ -0.19
TPM1-206ENST00000358278 FAM180AQ6UWF9 173 aa13.88□□□□□ -0.19
TPM1-206ENST00000358278 GRAMD2AQ8IUY3 354 aa13.88□□□□□ -0.19
TPM1-206ENST00000358278 ZNF440Q8IYI8 595 aa13.88□□□□□ -0.19
TPM1-206ENST00000358278 FADS6Q8N9I5 356 aa13.88□□□□□ -0.19
TPM1-206ENST00000358278 TOR1AIP2Q8NFQ8 470 aa13.88□□□□□ -0.19
TPM1-206ENST00000358278 OR2M3Q8NG83 312 aa13.88□□□□□ -0.19
TPM1-206ENST00000358278 OR10Q1Q8NGQ4 319 aa13.88□□□□□ -0.19
TPM1-206ENST00000358278 TRIM15Q9C019 465 aa13.88□□□□□ -0.19
TPM1-206ENST00000358278 ZNF703Q9H7S9 590 aaPredicted RBP13.88□□□□□ -0.19
TPM1-206ENST00000358278 EXOSC3Q9NQT5 275 aaKnown RBP13.88□□□□□ -0.19
TPM1-206ENST00000358278 SLC7A8Q9UHI5 535 aa13.88□□□□□ -0.19
TPM1-206ENST00000358278 DKKL1Q9UK85 242 aa13.88□□□□□ -0.19
TPM1-206ENST00000358278 SAMD4AQ9UPU9 718 aaKnown RBP13.88□□□□□ -0.19
TPM1-206ENST00000358278 CHST2Q9Y4C5 530 aa13.88□□□□□ -0.19
TPM1-206ENST00000358278 SYT5O00445 386 aa13.87□□□□□ -0.19
TPM1-206ENST00000358278 FRS3O43559 492 aa13.87□□□□□ -0.19
TPM1-206ENST00000358278 GLSO94925 669 aaPredicted RBP13.87□□□□□ -0.19
TPM1-206ENST00000358278 RFPL3SP0C7P2 107 aa13.87□□□□□ -0.19
TPM1-206ENST00000358278 ATP6V1B2P21281 511 aa13.87□□□□□ -0.19
TPM1-206ENST00000358278 RYKP34925 604 aa13.87□□□□□ -0.19
TPM1-206ENST00000358278 ZNF41P51814 821 aaPredicted RBP13.87□□□□□ -0.19
TPM1-206ENST00000358278 SUMO3P55854 103 aaPredicted RBP13.87□□□□□ -0.19
TPM1-206ENST00000358278 RGS8P57771 180 aaPredicted RBP13.87□□□□□ -0.19
TPM1-206ENST00000358278 SELENOWP63302 87 aa13.87□□□□□ -0.19
TPM1-206ENST00000358278 MS4A2Q01362 244 aa13.87□□□□□ -0.19
TPM1-206ENST00000358278 PLAURQ03405 335 aa13.87□□□□□ -0.19
TPM1-206ENST00000358278 CBFBQ13951 182 aa13.87□□□□□ -0.19
TPM1-206ENST00000358278 FLOT2Q14254 428 aa13.87□□□□□ -0.19
TPM1-206ENST00000358278 GANABQ14697 944 aaKnown RBP13.87□□□□□ -0.19
TPM1-206ENST00000358278 LCN8Q6JVE9 175 aa13.87□□□□□ -0.19
TPM1-206ENST00000358278 CBLL1Q75N03 491 aa13.87□□□□□ -0.19
TPM1-206ENST00000358278 SPPL2CQ8IUH8 684 aa13.87□□□□□ -0.19
TPM1-206ENST00000358278 EID3Q8N140 333 aa13.87□□□□□ -0.19
TPM1-206ENST00000358278 GPR32P1Q8NGA4 272 aa13.87□□□□□ -0.19
TPM1-206ENST00000358278 ARSGQ96EG1 525 aa13.87□□□□□ -0.19
TPM1-206ENST00000358278 TAAR6Q96RI8 345 aa13.87□□□□□ -0.19
TPM1-206ENST00000358278 DCAF13Q9NV06 445 aaKnown RBP13.87□□□□□ -0.19
TPM1-206ENST00000358278 ICAM5Q9UMF0 924 aa13.87□□□□□ -0.19
TPM1-206ENST00000358278 POMPQ9Y244 141 aa13.87□□□□□ -0.19
TPM1-206ENST00000358278 SLC9A8Q9Y2E8 581 aa13.87□□□□□ -0.19
TPM1-206ENST00000358278 V9GYQ6 96 aa13.87□□□□□ -0.19
TPM1-206ENST00000358278 ANKUB1A6NFN9 424 aa13.87□□□□□ -0.19
TPM1-206ENST00000358278 CFAP73A6NFT4 308 aa13.87□□□□□ -0.19
TPM1-206ENST00000358278 B4DXG7 233 aa13.87□□□□□ -0.19
TPM1-206ENST00000358278 FAM47E-STBD1D6RA91 191 aa13.87□□□□□ -0.19
TPM1-206ENST00000358278 CDC40O60508 579 aaKnown RBP eCLIP13.87□□□□□ -0.19
TPM1-206ENST00000358278 CIB2O75838 187 aa13.87□□□□□ -0.19
TPM1-206ENST00000358278 TRAPPC6AO75865 159 aa13.87□□□□□ -0.19
TPM1-206ENST00000358278 LGI1O95970 557 aa13.87□□□□□ -0.19
TPM1-206ENST00000358278 CRYABP02511 175 aaKnown RBP13.87□□□□□ -0.19
TPM1-206ENST00000358278 C8BP07358 591 aa13.87□□□□□ -0.19
TPM1-206ENST00000358278 GKN3PP0CG01 181 aa13.87□□□□□ -0.19
TPM1-206ENST00000358278 UQCRBP14927 111 aa13.87□□□□□ -0.19
TPM1-206ENST00000358278 DPP4P27487 766 aa13.87□□□□□ -0.19
TPM1-206ENST00000358278 MAGEA5P43359 124 aa13.87□□□□□ -0.19
TPM1-206ENST00000358278 SLC6A8P48029 635 aa13.87□□□□□ -0.19
TPM1-206ENST00000358278 ALDH6A1Q02252 535 aaKnown RBP13.87□□□□□ -0.19
TPM1-206ENST00000358278 TRAP1Q12931 704 aaKnown RBP13.87□□□□□ -0.19
TPM1-206ENST00000358278 HYAL4Q2M3T9 481 aa13.87□□□□□ -0.19
TPM1-206ENST00000358278 MTX3Q5HYI7 312 aa13.87□□□□□ -0.19
TPM1-206ENST00000358278 FKBP9P1Q75LS8 142 aa13.87□□□□□ -0.19
TPM1-206ENST00000358278 ZNF550Q7Z398 422 aa13.87□□□□□ -0.19
TPM1-206ENST00000358278 COMTD1Q86VU5 262 aa13.87□□□□□ -0.19
TPM1-206ENST00000358278 TMEM251Q8N6I4 163 aa13.87□□□□□ -0.19
TPM1-206ENST00000358278 LSM14AQ8ND56 463 aaKnown RBP13.87□□□□□ -0.19
TPM1-206ENST00000358278 OR5W2Q8NH69 310 aa13.87□□□□□ -0.19
TPM1-206ENST00000358278 VANGL1Q8TAA9 524 aaPredicted RBP13.87□□□□□ -0.19
TPM1-206ENST00000358278 HSH2DQ96JZ2 352 aa13.87□□□□□ -0.19
TPM1-206ENST00000358278 RSPO3Q9BXY4 272 aaPredicted RBP13.87□□□□□ -0.19
TPM1-206ENST00000358278 VDAC3Q9Y277 283 aa13.87□□□□□ -0.19
TPM1-206ENST00000358278 SH3GLB1Q9Y371 365 aa13.87□□□□□ -0.19
TPM1-206ENST00000358278 CFAP46Q8IYW2 2715 aa13.86□□□□□ -0.19
TPM1-206ENST00000358278 M0R3H8 397 aa13.86□□□□□ -0.19
TPM1-206ENST00000358278 EPPINO95925 133 aa13.86□□□□□ -0.19
TPM1-206ENST00000358278 LINGO3P0C6S8 592 aa13.86□□□□□ -0.19
TPM1-206ENST00000358278 PGCP20142 388 aa13.86□□□□□ -0.19
TPM1-206ENST00000358278 TCEA1P23193 301 aaKnown RBP13.86□□□□□ -0.19
TPM1-206ENST00000358278 DSCR4P56555 118 aaPredicted RBP13.86□□□□□ -0.19
TPM1-206ENST00000358278 RNFT1Q5M7Z0 435 aa13.86□□□□□ -0.19
TPM1-206ENST00000358278 C1orf146Q5VVC0 180 aa13.86□□□□□ -0.19
TPM1-206ENST00000358278 VTCN1Q7Z7D3 282 aa13.86□□□□□ -0.19
TPM1-206ENST00000358278 FAM109AQ8N4B1 249 aa13.86□□□□□ -0.19
TPM1-206ENST00000358278 CISD2Q8N5K1 135 aaKnown RBP13.86□□□□□ -0.19
TPM1-206ENST00000358278 OR52E4Q8NGH9 312 aa13.86□□□□□ -0.19
TPM1-206ENST00000358278 ZNF563Q8TA94 476 aa13.86□□□□□ -0.19
TPM1-206ENST00000358278 SLC35B4Q969S0 331 aa13.86□□□□□ -0.19
TPM1-206ENST00000358278 C1GALT1C1Q96EU7 318 aa13.86□□□□□ -0.19
TPM1-206ENST00000358278 RAB3IPQ96QF0 476 aaPredicted RBP13.86□□□□□ -0.19
TPM1-206ENST00000358278 TSPAN10Q9H1Z9 355 aaPredicted RBP13.86□□□□□ -0.19
TPM1-206ENST00000358278 UBQLN3Q9H347 655 aa13.86□□□□□ -0.19
TPM1-206ENST00000358278 ANAPC2Q9UJX6 822 aa13.86□□□□□ -0.19
TPM1-206ENST00000358278 SHANK1Q9Y566 2161 aa13.85□□□□□ -0.19
TPM1-206ENST00000358278 TTLL8A6PVC2 850 aa13.85□□□□□ -0.19
TPM1-206ENST00000358278 ACOT8O14734 319 aa13.85□□□□□ -0.19
TPM1-206ENST00000358278 TNFRSF1BP20333 461 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms