RNA–Protein interactions for RNA: ENST00000356805.8

SPTBN1-202, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTBN1, Length 8,482 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-202ENST00000356805 RBPMSQ93062 196 aaKnown RBP10.85□□□□□ -0.67
SPTBN1-202ENST00000356805 MAL2Q969L2 176 aa10.85□□□□□ -0.67
SPTBN1-202ENST00000356805 SMIM3Q9BZL3 60 aa10.85□□□□□ -0.67
SPTBN1-202ENST00000356805 SCN8AQ9UQD0 1980 aa10.85□□□□□ -0.67
SPTBN1-202ENST00000356805 GLTPD2A6NH11 291 aa10.85□□□□□ -0.67
SPTBN1-202ENST00000356805 NFYAP23511 347 aaPredicted RBP10.85□□□□□ -0.67
SPTBN1-202ENST00000356805 P2RX1P51575 399 aa10.85□□□□□ -0.67
SPTBN1-202ENST00000356805 ADARB1P78563 741 aaKnown RBP10.85□□□□□ -0.67
SPTBN1-202ENST00000356805 CHRNEQ04844 493 aa10.85□□□□□ -0.67
SPTBN1-202ENST00000356805 POU4F3Q15319 338 aa10.85□□□□□ -0.67
SPTBN1-202ENST00000356805 AAK1Q2M2I8 961 aa10.85□□□□□ -0.67
SPTBN1-202ENST00000356805 CDHR3Q6ZTQ4 885 aa10.85□□□□□ -0.67
SPTBN1-202ENST00000356805 MCATQ8IVS2 390 aaKnown RBP10.85□□□□□ -0.67
SPTBN1-202ENST00000356805 SUCNR1Q9BXA5 334 aa10.85□□□□□ -0.67
SPTBN1-202ENST00000356805 B4GALT6Q9UBX8 382 aa10.85□□□□□ -0.67
SPTBN1-202ENST00000356805 HEMK1Q9Y5R4 338 aaPredicted RBP10.85□□□□□ -0.67
SPTBN1-202ENST00000356805 SLIT2O94813 1529 aa10.85□□□□□ -0.67
SPTBN1-202ENST00000356805 TRAV18A0A075B6X5 111 aa10.85□□□□□ -0.67
SPTBN1-202ENST00000356805 A0A1W2PPV4 95 aa10.85□□□□□ -0.67
SPTBN1-202ENST00000356805 C1orf226A1L170 272 aa10.85□□□□□ -0.67
SPTBN1-202ENST00000356805 C1GALT1C1LP0DN25 315 aa10.85□□□□□ -0.67
SPTBN1-202ENST00000356805 NDUFA6P56556 154 aa10.85□□□□□ -0.67
SPTBN1-202ENST00000356805 RPL23AP62750 156 aaKnown RBP10.85□□□□□ -0.67
SPTBN1-202ENST00000356805 HHEXQ03014 270 aa10.85□□□□□ -0.67
SPTBN1-202ENST00000356805 SHISA6Q6ZSJ9 500 aa10.85□□□□□ -0.67
SPTBN1-202ENST00000356805 OR14J1Q9UGF5 321 aa10.85□□□□□ -0.67
SPTBN1-202ENST00000356805 HCRTO43612 131 aa10.85□□□□□ -0.67
SPTBN1-202ENST00000356805 TUSC2O75896 110 aa10.85□□□□□ -0.67
SPTBN1-202ENST00000356805 IVDP26440 423 aa10.85□□□□□ -0.67
SPTBN1-202ENST00000356805 MS4A2Q01362 244 aa10.85□□□□□ -0.67
SPTBN1-202ENST00000356805 SCAPQ12770 1279 aa10.85□□□□□ -0.67
SPTBN1-202ENST00000356805 UNC50Q53HI1 259 aa10.85□□□□□ -0.67
SPTBN1-202ENST00000356805 TMEM41BQ5BJD5 291 aa10.85□□□□□ -0.67
SPTBN1-202ENST00000356805 ATPAF1Q5TC12 328 aaPredicted RBP10.85□□□□□ -0.67
SPTBN1-202ENST00000356805 Q6ZVL8 140 aa10.85□□□□□ -0.67
SPTBN1-202ENST00000356805 LRRC56Q8IYG6 542 aaPredicted RBP10.85□□□□□ -0.67
SPTBN1-202ENST00000356805 NSUN5Q96P11 429 aaKnown RBP10.85□□□□□ -0.67
SPTBN1-202ENST00000356805 NAV1Q8NEY1 1877 aa10.85□□□□□ -0.67
SPTBN1-202ENST00000356805 PTGER4P35408 488 aa10.85□□□□□ -0.67
SPTBN1-202ENST00000356805 MZT1Q08AG7 82 aa10.85□□□□□ -0.67
SPTBN1-202ENST00000356805 TIGD3Q6B0B8 471 aa10.85□□□□□ -0.67
SPTBN1-202ENST00000356805 TMEM71Q6P5X7 295 aa10.85□□□□□ -0.67
SPTBN1-202ENST00000356805 SLC51BQ86UW2 128 aa10.85□□□□□ -0.67
SPTBN1-202ENST00000356805 TMEM200AQ86VY9 491 aa10.85□□□□□ -0.67
SPTBN1-202ENST00000356805 SLC35F2Q8IXU6 374 aa10.85□□□□□ -0.67
SPTBN1-202ENST00000356805 LRRC18Q8N456 261 aa10.85□□□□□ -0.67
SPTBN1-202ENST00000356805 OR52N2Q8NGI0 321 aa10.85□□□□□ -0.67
SPTBN1-202ENST00000356805 SLC19A3Q9BZV2 496 aa10.85□□□□□ -0.67
SPTBN1-202ENST00000356805 RDH14Q9HBH5 336 aa10.85□□□□□ -0.67
SPTBN1-202ENST00000356805 ZNF736B4DX44 427 aaPredicted RBP10.84□□□□□ -0.67
SPTBN1-202ENST00000356805 ARNTLO00327 626 aa10.84□□□□□ -0.67
SPTBN1-202ENST00000356805 COCHO43405 550 aa10.84□□□□□ -0.67
SPTBN1-202ENST00000356805 CBX7O95931 251 aa10.84□□□□□ -0.67
SPTBN1-202ENST00000356805 LCN10Q6JVE6 187 aa10.84□□□□□ -0.67
SPTBN1-202ENST00000356805 CTU1Q7Z7A3 348 aaKnown RBP10.84□□□□□ -0.67
SPTBN1-202ENST00000356805 ZFP82Q8N141 532 aa10.84□□□□□ -0.67
SPTBN1-202ENST00000356805 CLEC4DQ8WXI8 215 aa10.84□□□□□ -0.67
SPTBN1-202ENST00000356805 CASD1Q96PB1 797 aa10.84□□□□□ -0.67
SPTBN1-202ENST00000356805 DVL2O14641 736 aa10.84□□□□□ -0.67
SPTBN1-202ENST00000356805 B4GAT1O43505 415 aa10.84□□□□□ -0.67
SPTBN1-202ENST00000356805 MPIG6BO95866 241 aa10.84□□□□□ -0.67
SPTBN1-202ENST00000356805 BPIP17213 487 aa10.84□□□□□ -0.67
SPTBN1-202ENST00000356805 PCGF2P35227 344 aa10.84□□□□□ -0.67
SPTBN1-202ENST00000356805 BTG1P62324 171 aa10.84□□□□□ -0.67
SPTBN1-202ENST00000356805 LIPHQ8WWY8 451 aa10.84□□□□□ -0.67
SPTBN1-202ENST00000356805 IL17FQ96PD4 163 aa10.84□□□□□ -0.67
SPTBN1-202ENST00000356805 RANGRFQ9HD47 186 aaPredicted RBP10.84□□□□□ -0.67
SPTBN1-202ENST00000356805 OBP2BQ9NPH6 170 aa10.84□□□□□ -0.67
SPTBN1-202ENST00000356805 SLC22A11Q9NSA0 550 aa10.84□□□□□ -0.67
SPTBN1-202ENST00000356805 FAM212BQ9NTI7 297 aaPredicted RBP10.84□□□□□ -0.67
SPTBN1-202ENST00000356805 VDAC3Q9Y277 283 aa10.84□□□□□ -0.67
SPTBN1-202ENST00000356805 FANCGO15287 622 aa10.84□□□□□ -0.67
SPTBN1-202ENST00000356805 KITLGP21583 273 aa10.84□□□□□ -0.67
SPTBN1-202ENST00000356805 TNFSF8P32971 234 aa10.84□□□□□ -0.67
SPTBN1-202ENST00000356805 DEFB110Q30KQ9 67 aa10.84□□□□□ -0.67
SPTBN1-202ENST00000356805 RDH10Q8IZV5 341 aa10.84□□□□□ -0.67
SPTBN1-202ENST00000356805 HUS1BQ8NHY5 278 aa10.84□□□□□ -0.67
SPTBN1-202ENST00000356805 C1orf74Q96LT6 269 aa10.84□□□□□ -0.67
SPTBN1-202ENST00000356805 NPY6RQ99463 290 aa10.84□□□□□ -0.67
SPTBN1-202ENST00000356805 CTRCQ99895 268 aa10.84□□□□□ -0.67
SPTBN1-202ENST00000356805 RNF39Q9H2S5 420 aa10.84□□□□□ -0.67
SPTBN1-202ENST00000356805 MVB12BQ9H7P6 319 aa10.84□□□□□ -0.67
SPTBN1-202ENST00000356805 FBXO7Q9Y3I1 522 aa10.84□□□□□ -0.67
SPTBN1-202ENST00000356805 DCDC2BA2VCK2 349 aa10.84□□□□□ -0.67
SPTBN1-202ENST00000356805 WASH4PA8MWX3 477 aa10.84□□□□□ -0.67
SPTBN1-202ENST00000356805 ENPP6Q6UWR7 440 aa10.84□□□□□ -0.67
SPTBN1-202ENST00000356805 ABHD12BQ7Z5M8 362 aaPredicted RBP10.84□□□□□ -0.67
SPTBN1-202ENST00000356805 OR2T4Q8NH00 348 aa10.84□□□□□ -0.67
SPTBN1-202ENST00000356805 DYNLRB1Q9NP97 96 aa10.84□□□□□ -0.67
SPTBN1-202ENST00000356805 DNAJC15Q9Y5T4 150 aa10.84□□□□□ -0.67
SPTBN1-202ENST00000356805 TOR1AO14656 332 aa10.84□□□□□ -0.67
SPTBN1-202ENST00000356805 TGOLN2O43493 480 aa10.84□□□□□ -0.67
SPTBN1-202ENST00000356805 BMP4P12644 408 aa10.84□□□□□ -0.67
SPTBN1-202ENST00000356805 IL4RP24394 825 aa10.84□□□□□ -0.67
SPTBN1-202ENST00000356805 FOLR3P41439 243 aa10.84□□□□□ -0.67
SPTBN1-202ENST00000356805 SPOCK1Q08629 439 aa10.84□□□□□ -0.67
SPTBN1-202ENST00000356805 GRB7Q14451 532 aa10.84□□□□□ -0.67
SPTBN1-202ENST00000356805 SPRED3Q2MJR0 410 aa10.84□□□□□ -0.67
SPTBN1-202ENST00000356805 BCL7AQ4VC05 210 aa10.84□□□□□ -0.67
SPTBN1-202ENST00000356805 TXNRD3NBQ6F5E7 133 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms