RNA–Protein interactions for RNA: ENST00000356000.7

RTN3-205, Transcript of reticulon 3, humanhuman

TSL 2 BASIC

Gene RTN3, Length 2,645 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-205ENST00000356000 GPBAR1Q8TDU6 330 aa14.67□□□□□ -0.06
RTN3-205ENST00000356000 RSRP1Q9BUV0 290 aa14.67□□□□□ -0.06
RTN3-205ENST00000356000 METTL9Q9H1A3 318 aa14.67□□□□□ -0.06
RTN3-205ENST00000356000 UQCC1Q9NVA1 299 aa14.67□□□□□ -0.06
RTN3-205ENST00000356000 RNF13O43567 381 aa14.67□□□□□ -0.06
RTN3-205ENST00000356000 OR10H3O60404 316 aa14.67□□□□□ -0.06
RTN3-205ENST00000356000 GUCA1CO95843 209 aa14.67□□□□□ -0.06
RTN3-205ENST00000356000 ANXA2P07355 339 aaKnown RBP14.67□□□□□ -0.06
RTN3-205ENST00000356000 COX7A2P14406 83 aa14.67□□□□□ -0.06
RTN3-205ENST00000356000 SCARB2Q14108 478 aa14.67□□□□□ -0.06
RTN3-205ENST00000356000 MPPED2Q15777 294 aa14.67□□□□□ -0.06
RTN3-205ENST00000356000 DCAF12L2Q5VW00 463 aa14.67□□□□□ -0.06
RTN3-205ENST00000356000 RAB12Q6IQ22 244 aa14.67□□□□□ -0.06
RTN3-205ENST00000356000 ACSM5Q6NUN0 579 aa14.67□□□□□ -0.06
RTN3-205ENST00000356000 PGBD2Q6P3X8 592 aa14.67□□□□□ -0.06
RTN3-205ENST00000356000 PAQR9Q6ZVX9 377 aa14.67□□□□□ -0.06
RTN3-205ENST00000356000 ARRDC2Q8TBH0 407 aa14.67□□□□□ -0.06
RTN3-205ENST00000356000 APOLD1Q96LR9 279 aa14.67□□□□□ -0.06
RTN3-205ENST00000356000 ZNF559Q9BR84 538 aa14.67□□□□□ -0.06
RTN3-205ENST00000356000 PINK1Q9BXM7 581 aa14.67□□□□□ -0.06
RTN3-205ENST00000356000 KLHL31Q9H511 634 aa14.67□□□□□ -0.06
RTN3-205ENST00000356000 SUV39H2Q9H5I1 410 aa14.67□□□□□ -0.06
RTN3-205ENST00000356000 NLE1Q9NVX2 485 aaPredicted RBP14.67□□□□□ -0.06
RTN3-205ENST00000356000 SPG21Q9NZD8 308 aa14.67□□□□□ -0.06
RTN3-205ENST00000356000 TRBC2A0A5B9 178 aa14.66□□□□□ -0.06
RTN3-205ENST00000356000 UBE2QL1A1L167 161 aa14.66□□□□□ -0.06
RTN3-205ENST00000356000 PGRMC2O15173 223 aa14.66□□□□□ -0.06
RTN3-205ENST00000356000 RDH16O75452 317 aa14.66□□□□□ -0.06
RTN3-205ENST00000356000 IFNW1P05000 195 aa14.66□□□□□ -0.06
RTN3-205ENST00000356000 INHAP05111 366 aa14.66□□□□□ -0.06
RTN3-205ENST00000356000 FGF1P05230 155 aa14.66□□□□□ -0.06
RTN3-205ENST00000356000 EDN3P14138 238 aa14.66□□□□□ -0.06
RTN3-205ENST00000356000 CERS1P27544 350 aa14.66□□□□□ -0.06
RTN3-205ENST00000356000 ASMTP46597 345 aa14.66□□□□□ -0.06
RTN3-205ENST00000356000 NUTF2P61970 127 aaKnown RBP14.66□□□□□ -0.06
RTN3-205ENST00000356000 SLC10A7Q0GE19 358 aa14.66□□□□□ -0.06
RTN3-205ENST00000356000 GAB1Q13480 694 aa14.66□□□□□ -0.06
RTN3-205ENST00000356000 GINS1Q14691 196 aa14.66□□□□□ -0.06
RTN3-205ENST00000356000 ZNF805Q5CZA5 627 aa14.66□□□□□ -0.06
RTN3-205ENST00000356000 ARTNQ5T4W7 220 aa14.66□□□□□ -0.06
RTN3-205ENST00000356000 CXorf57Q6NSI4 855 aaKnown RBP14.66□□□□□ -0.06
RTN3-205ENST00000356000 NOXRED1Q6NXP6 359 aa14.66□□□□□ -0.06
RTN3-205ENST00000356000 APOOLQ6UXV4 268 aa14.66□□□□□ -0.06
RTN3-205ENST00000356000 ZNF783Q6ZMS7 281 aa14.66□□□□□ -0.06
RTN3-205ENST00000356000 KCNRGQ8N5I3 272 aa14.66□□□□□ -0.06
RTN3-205ENST00000356000 GPRC5AQ8NFJ5 357 aa14.66□□□□□ -0.06
RTN3-205ENST00000356000 OR2AK2Q8NG84 335 aa14.66□□□□□ -0.06
RTN3-205ENST00000356000 OR52B4Q8NGK2 314 aa14.66□□□□□ -0.06
RTN3-205ENST00000356000 ZNF75AQ96N20 296 aa14.66□□□□□ -0.06
RTN3-205ENST00000356000 ZNF649Q9BS31 505 aa14.66□□□□□ -0.06
RTN3-205ENST00000356000 CXCL16Q9H2A7 254 aa14.66□□□□□ -0.06
RTN3-205ENST00000356000 A0A087X0M5 115 aa14.66□□□□□ -0.06
RTN3-205ENST00000356000 A0A1B0GX30 115 aa14.66□□□□□ -0.06
RTN3-205ENST00000356000 NPIPB8E9PQR5 432 aa14.66□□□□□ -0.06
RTN3-205ENST00000356000 FGF16O43320 207 aa14.66□□□□□ -0.06
RTN3-205ENST00000356000 MBP02144 154 aa14.66□□□□□ -0.06
RTN3-205ENST00000356000 CD2P06729 351 aa14.66□□□□□ -0.06
RTN3-205ENST00000356000 LAMP1P11279 417 aa14.66□□□□□ -0.06
RTN3-205ENST00000356000 AMD1P17707 334 aa14.66□□□□□ -0.06
RTN3-205ENST00000356000 ELAVL4P26378 380 aaKnown RBP14.66□□□□□ -0.06
RTN3-205ENST00000356000 MNDAP41218 407 aa14.66□□□□□ -0.06
RTN3-205ENST00000356000 GIPRP48546 466 aa14.66□□□□□ -0.06
RTN3-205ENST00000356000 DGKGP49619 791 aa14.66□□□□□ -0.06
RTN3-205ENST00000356000 CDKN1CP49918 316 aaPredicted RBP14.66□□□□□ -0.06
RTN3-205ENST00000356000 LIM2P55344 173 aa14.66□□□□□ -0.06
RTN3-205ENST00000356000 CPSF6Q16630 551 aaKnown RBP eCLIP14.66□□□□□ -0.06
RTN3-205ENST00000356000 SLC25A35Q3KQZ1 300 aa14.66□□□□□ -0.06
RTN3-205ENST00000356000 LINC00303Q3SY05 128 aa14.66□□□□□ -0.06
RTN3-205ENST00000356000 HEPHL1Q6MZM0 1159 aa14.66□□□□□ -0.06
RTN3-205ENST00000356000 UNQ6494/PRO21346Q6UXR6 183 aa14.66□□□□□ -0.06
RTN3-205ENST00000356000 SLC36A4Q6YBV0 504 aa14.66□□□□□ -0.06
RTN3-205ENST00000356000 SSX6Q7RTT6 188 aa14.66□□□□□ -0.06
RTN3-205ENST00000356000 TMEM200AQ86VY9 491 aa14.66□□□□□ -0.06
RTN3-205ENST00000356000 HORMAD2Q8N7B1 307 aa14.66□□□□□ -0.06
RTN3-205ENST00000356000 NFKBIDQ8NI38 313 aa14.66□□□□□ -0.06
RTN3-205ENST00000356000 SPRYD4Q8WW59 207 aaPredicted RBP14.66□□□□□ -0.06
RTN3-205ENST00000356000 ASB13Q8WXK3 278 aa14.66□□□□□ -0.06
RTN3-205ENST00000356000 RBM18Q96H35 190 aaKnown RBP14.66□□□□□ -0.06
RTN3-205ENST00000356000 CLCC1Q96S66 551 aa14.66□□□□□ -0.06
RTN3-205ENST00000356000 TGIF2Q9GZN2 237 aa14.66□□□□□ -0.06
RTN3-205ENST00000356000 DUSP22Q9NRW4 184 aa14.66□□□□□ -0.06
RTN3-205ENST00000356000 A0A0A6YYC8 382 aaPredicted RBP14.65□□□□□ -0.06
RTN3-205ENST00000356000 MARCH11A6NNE9 402 aa14.65□□□□□ -0.06
RTN3-205ENST00000356000 I3L1I5 382 aaPredicted RBP14.65□□□□□ -0.06
RTN3-205ENST00000356000 FAAHO00519 579 aa14.65□□□□□ -0.06
RTN3-205ENST00000356000 SERPIND1P05546 499 aa14.65□□□□□ -0.06
RTN3-205ENST00000356000 RHOP08100 348 aa14.65□□□□□ -0.06
RTN3-205ENST00000356000 PIRTP0C851 137 aa14.65□□□□□ -0.06
RTN3-205ENST00000356000 CRATP43155 626 aa14.65□□□□□ -0.06
RTN3-205ENST00000356000 SLC11A2P49281 568 aa14.65□□□□□ -0.06
RTN3-205ENST00000356000 AP3S2P59780 193 aa14.65□□□□□ -0.06
RTN3-205ENST00000356000 DCST1Q5T197 706 aa14.65□□□□□ -0.06
RTN3-205ENST00000356000 NCMAPQ5T1S8 102 aa14.65□□□□□ -0.06
RTN3-205ENST00000356000 MARC1Q5VT66 337 aa14.65□□□□□ -0.06
RTN3-205ENST00000356000 KIAA1211LQ6NV74 962 aa14.65□□□□□ -0.06
RTN3-205ENST00000356000 GPRIN1Q7Z2K8 1008 aa14.65□□□□□ -0.06
RTN3-205ENST00000356000 B3GALNT2Q8NCR0 500 aa14.65□□□□□ -0.06
RTN3-205ENST00000356000 CSGALNACT1Q8TDX6 532 aa14.65□□□□□ -0.06
RTN3-205ENST00000356000 S100PBPQ96BU1 408 aa14.65□□□□□ -0.06
RTN3-205ENST00000356000 KLHL5Q96PQ7 755 aa14.65□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms