RNA–Protein interactions for RNA: ENST00000354822.6

NKX2-1-201, Transcript of NK2 homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene NKX2-1, Length 2,191 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1-201ENST00000354822 IFT27Q9BW83 186 aa20.6■□□□□ 0.89
NKX2-1-201ENST00000354822 HDHD5Q9BXW7 423 aa20.6■□□□□ 0.89
NKX2-1-201ENST00000354822 TRIM2Q9C040 744 aa20.6■□□□□ 0.89
NKX2-1-201ENST00000354822 STARD5Q9NSY2 213 aa20.6■□□□□ 0.89
NKX2-1-201ENST00000354822 A0A0B4J2E0 115 aa20.59■□□□□ 0.89
NKX2-1-201ENST00000354822 A0A1B0GX12 115 aa20.59■□□□□ 0.89
NKX2-1-201ENST00000354822 C12orf71A8MTZ7 269 aa20.59■□□□□ 0.89
NKX2-1-201ENST00000354822 PRR23D1E9PI22 279 aaPredicted RBP20.59■□□□□ 0.89
NKX2-1-201ENST00000354822 POLR1CO15160 346 aaPredicted RBP20.59■□□□□ 0.89
NKX2-1-201ENST00000354822 LRRTM2O43300 516 aa20.59■□□□□ 0.89
NKX2-1-201ENST00000354822 THEGLP0DJG4 465 aa20.59■□□□□ 0.89
NKX2-1-201ENST00000354822 PRR23D2P0DMB1 279 aaPredicted RBP20.59■□□□□ 0.89
NKX2-1-201ENST00000354822 SAGP10523 405 aaPredicted RBP20.59■□□□□ 0.89
NKX2-1-201ENST00000354822 NUDT1P36639 197 aa20.59■□□□□ 0.89
NKX2-1-201ENST00000354822 RBM34P42696 430 aaKnown RBP20.59■□□□□ 0.89
NKX2-1-201ENST00000354822 FZD2Q14332 565 aa20.59■□□□□ 0.89
NKX2-1-201ENST00000354822 MZT2AQ6P582 158 aa20.59■□□□□ 0.89
NKX2-1-201ENST00000354822 KCNN2Q9H2S1 579 aa20.59■□□□□ 0.89
NKX2-1-201ENST00000354822 GPR27Q9NS67 375 aa20.59■□□□□ 0.89
NKX2-1-201ENST00000354822 SCN2AQ99250 2005 aa20.59■□□□□ 0.89
NKX2-1-201ENST00000354822 A0A1W2PQ09 198 aa20.59■□□□□ 0.89
NKX2-1-201ENST00000354822 PTP4A3O75365 173 aa20.59■□□□□ 0.89
NKX2-1-201ENST00000354822 PTNP21246 168 aa20.59■□□□□ 0.89
NKX2-1-201ENST00000354822 AZGP1P25311 298 aaKnown RBP20.59■□□□□ 0.89
NKX2-1-201ENST00000354822 PTBP1P26599 531 aaKnown RBP eCLIP20.59■□□□□ 0.89
NKX2-1-201ENST00000354822 CARTPTQ16568 116 aa20.59■□□□□ 0.89
NKX2-1-201ENST00000354822 ZNF542PQ5EBM4 170 aa20.59■□□□□ 0.89
NKX2-1-201ENST00000354822 RAB43Q86YS6 212 aa20.59■□□□□ 0.89
NKX2-1-201ENST00000354822 UBQLNLQ8IYU4 475 aa20.59■□□□□ 0.89
NKX2-1-201ENST00000354822 OR9A4Q8NGU2 314 aa20.59■□□□□ 0.89
NKX2-1-201ENST00000354822 OR4C6Q8NH72 309 aa20.59■□□□□ 0.89
NKX2-1-201ENST00000354822 RBM18Q96H35 190 aaKnown RBP20.59■□□□□ 0.89
NKX2-1-201ENST00000354822 SLC22A4Q9H015 551 aa20.59■□□□□ 0.89
NKX2-1-201ENST00000354822 FAM60AQ9NP50 221 aa20.59■□□□□ 0.89
NKX2-1-201ENST00000354822 SLC35A3Q9Y2D2 325 aa20.59■□□□□ 0.89
NKX2-1-201ENST00000354822 SRPX2O60687 465 aaPredicted RBP20.58■□□□□ 0.89
NKX2-1-201ENST00000354822 CELA2BP08218 269 aaPredicted RBP20.58■□□□□ 0.89
NKX2-1-201ENST00000354822 ST6GAL1P15907 406 aa20.58■□□□□ 0.89
NKX2-1-201ENST00000354822 CD53P19397 219 aa20.58■□□□□ 0.89
NKX2-1-201ENST00000354822 GALEQ14376 348 aa20.58■□□□□ 0.89
NKX2-1-201ENST00000354822 SLC35F1Q5T1Q4 408 aa20.58■□□□□ 0.89
NKX2-1-201ENST00000354822 NCCRP1Q6ZVX7 275 aaPredicted RBP20.58■□□□□ 0.89
NKX2-1-201ENST00000354822 SPATC1Q76KD6 591 aa20.58■□□□□ 0.89
NKX2-1-201ENST00000354822 SFTPA2Q8IWL1 248 aa20.58■□□□□ 0.89
NKX2-1-201ENST00000354822 SHISA5Q8N114 240 aa20.58■□□□□ 0.89
NKX2-1-201ENST00000354822 ARHGEF39Q8N4T4 335 aa20.58■□□□□ 0.89
NKX2-1-201ENST00000354822 ZDHHC1Q8WTX9 485 aa20.58■□□□□ 0.89
NKX2-1-201ENST00000354822 ALG8Q9BVK2 526 aa20.58■□□□□ 0.89
NKX2-1-201ENST00000354822 ENKD1Q9H0I2 346 aa20.58■□□□□ 0.89
NKX2-1-201ENST00000354822 ST6GALNAC1Q9NSC7 600 aaPredicted RBP20.58■□□□□ 0.89
NKX2-1-201ENST00000354822 MRPS33Q9Y291 106 aaKnown RBP20.58■□□□□ 0.89
NKX2-1-201ENST00000354822 DAPL1A0PJW8 107 aa20.58■□□□□ 0.88
NKX2-1-201ENST00000354822 SHISA7A6NL88 538 aa20.58■□□□□ 0.88
NKX2-1-201ENST00000354822 RIIAD1A6NNX1 92 aa20.58■□□□□ 0.88
NKX2-1-201ENST00000354822 TYRP1P17643 537 aa20.58■□□□□ 0.88
NKX2-1-201ENST00000354822 S1PR1P21453 382 aa20.58■□□□□ 0.88
NKX2-1-201ENST00000354822 CAPZA2P47755 286 aa20.58■□□□□ 0.88
NKX2-1-201ENST00000354822 RFX2P48378 723 aa20.58■□□□□ 0.88
NKX2-1-201ENST00000354822 PPP1CAP62136 330 aa20.58■□□□□ 0.88
NKX2-1-201ENST00000354822 PSG6Q00889 435 aa20.58■□□□□ 0.88
NKX2-1-201ENST00000354822 RTL4Q6ZR62 310 aa20.58■□□□□ 0.88
NKX2-1-201ENST00000354822 ZNF438Q7Z4V0 828 aa20.58■□□□□ 0.88
NKX2-1-201ENST00000354822 MCATQ8IVS2 390 aaKnown RBP20.58■□□□□ 0.88
NKX2-1-201ENST00000354822 LSMEM1Q8N8F7 131 aa20.58■□□□□ 0.88
NKX2-1-201ENST00000354822 C19orf47Q8N9M1 422 aaKnown RBP20.58■□□□□ 0.88
NKX2-1-201ENST00000354822 SLC37A3Q8NCC5 494 aa20.58■□□□□ 0.88
NKX2-1-201ENST00000354822 FAM174AQ8TBP5 190 aa20.58■□□□□ 0.88
NKX2-1-201ENST00000354822 CNOT9Q92600 299 aaKnown RBP20.58■□□□□ 0.88
NKX2-1-201ENST00000354822 TOE1Q96GM8 510 aaKnown RBP20.58■□□□□ 0.88
NKX2-1-201ENST00000354822 FOLH1BQ9HBA9 442 aa20.58■□□□□ 0.88
NKX2-1-201ENST00000354822 SSX4O60224 188 aa20.57■□□□□ 0.88
NKX2-1-201ENST00000354822 CSF3P09919 207 aa20.57■□□□□ 0.88
NKX2-1-201ENST00000354822 RNH1P13489 461 aaKnown RBP20.57■□□□□ 0.88
NKX2-1-201ENST00000354822 FUT1P19526 365 aa20.57■□□□□ 0.88
NKX2-1-201ENST00000354822 FZD5Q13467 585 aa20.57■□□□□ 0.88
NKX2-1-201ENST00000354822 KCNJ8Q15842 424 aa20.57■□□□□ 0.88
NKX2-1-201ENST00000354822 PYDC2Q56P42 97 aa20.57■□□□□ 0.88
NKX2-1-201ENST00000354822 ZNF517Q6ZMY9 492 aaPredicted RBP20.57■□□□□ 0.88
NKX2-1-201ENST00000354822 OR13C2Q8NGS9 318 aa20.57■□□□□ 0.88
NKX2-1-201ENST00000354822 RIT1Q92963 219 aa20.57■□□□□ 0.88
NKX2-1-201ENST00000354822 PTP4A1Q93096 173 aa20.57■□□□□ 0.88
NKX2-1-201ENST00000354822 MSANTD3Q96H12 275 aa20.57■□□□□ 0.88
NKX2-1-201ENST00000354822 TEAD3Q99594 435 aa20.57■□□□□ 0.88
NKX2-1-201ENST00000354822 MOV10Q9HCE1 1003 aaKnown RBP20.57■□□□□ 0.88
NKX2-1-201ENST00000354822 MEPEQ9NQ76 525 aaPredicted RBP20.57■□□□□ 0.88
NKX2-1-201ENST00000354822 TRIM36Q9NQ86 728 aa20.57■□□□□ 0.88
NKX2-1-201ENST00000354822 COMMD3Q9UBI1 195 aa20.57■□□□□ 0.88
NKX2-1-201ENST00000354822 RNF13O43567 381 aa20.56■□□□□ 0.88
NKX2-1-201ENST00000354822 CTNSO60931 367 aa20.56■□□□□ 0.88
NKX2-1-201ENST00000354822 RGS9O75916 674 aaPredicted RBP20.56■□□□□ 0.88
NKX2-1-201ENST00000354822 HTR3AP46098 478 aa20.56■□□□□ 0.88
NKX2-1-201ENST00000354822 STX4Q12846 297 aa20.56■□□□□ 0.88
NKX2-1-201ENST00000354822 KLHL12Q53G59 568 aa20.56■□□□□ 0.88
NKX2-1-201ENST00000354822 DGAT2L6Q6ZPD8 337 aa20.56■□□□□ 0.88
NKX2-1-201ENST00000354822 ZNF550Q7Z398 422 aa20.56■□□□□ 0.88
NKX2-1-201ENST00000354822 ZAR1Q86SH2 424 aa20.56■□□□□ 0.88
NKX2-1-201ENST00000354822 ZNF761Q86XN6 746 aaPredicted RBP20.56■□□□□ 0.88
NKX2-1-201ENST00000354822 GPALPP1Q8IXQ4 340 aa20.56■□□□□ 0.88
NKX2-1-201ENST00000354822 SLC2A12Q8TD20 617 aa20.56■□□□□ 0.88
NKX2-1-201ENST00000354822 ADAMTS18Q8TE60 1221 aa20.56■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms