RNA–Protein interactions for RNA: ENST00000352393.8

CPNE1-202, Transcript of copine 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE1, Length 2,147 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-202ENST00000352393 PRR23D1E9PI22 279 aaPredicted RBP22.74■■□□□ 1.23
CPNE1-202ENST00000352393 FABP7O15540 132 aa22.74■■□□□ 1.23
CPNE1-202ENST00000352393 PRR23D2P0DMB1 279 aaPredicted RBP22.74■■□□□ 1.23
CPNE1-202ENST00000352393 OR3A3P47888 321 aa22.74■■□□□ 1.23
CPNE1-202ENST00000352393 EXOSC6Q5RKV6 272 aaKnown RBP22.74■■□□□ 1.23
CPNE1-202ENST00000352393 ANKRD54Q6NXT1 300 aa22.74■■□□□ 1.23
CPNE1-202ENST00000352393 SAMD14Q8IZD0 417 aaPredicted RBP22.74■■□□□ 1.23
CPNE1-202ENST00000352393 FAM109AQ8N4B1 249 aa22.74■■□□□ 1.23
CPNE1-202ENST00000352393 OR13C2Q8NGS9 318 aa22.74■■□□□ 1.23
CPNE1-202ENST00000352393 TEAD3Q99594 435 aa22.74■■□□□ 1.23
CPNE1-202ENST00000352393 ADGRL4Q9HBW9 690 aa22.74■■□□□ 1.23
CPNE1-202ENST00000352393 MRPL39Q9NYK5 338 aaKnown RBP22.74■■□□□ 1.23
CPNE1-202ENST00000352393 GPSM3Q9Y4H4 160 aa22.74■■□□□ 1.23
CPNE1-202ENST00000352393 RCBTB2O95199 551 aa22.73■■□□□ 1.23
CPNE1-202ENST00000352393 DHFRP00374 187 aa22.73■■□□□ 1.23
CPNE1-202ENST00000352393 DBIP07108 87 aaKnown RBP22.73■■□□□ 1.23
CPNE1-202ENST00000352393 GKN3PP0CG01 181 aa22.73■■□□□ 1.23
CPNE1-202ENST00000352393 SLC2A5P22732 501 aa22.73■■□□□ 1.23
CPNE1-202ENST00000352393 ARPC4P59998 168 aa22.73■■□□□ 1.23
CPNE1-202ENST00000352393 RPS15AP62244 130 aaKnown RBP22.73■■□□□ 1.23
CPNE1-202ENST00000352393 ZNF85Q03923 595 aa22.73■■□□□ 1.23
CPNE1-202ENST00000352393 SLC3A1Q07837 685 aa22.73■■□□□ 1.23
CPNE1-202ENST00000352393 RGS1Q08116 209 aa22.73■■□□□ 1.23
CPNE1-202ENST00000352393 SLC25A35Q3KQZ1 300 aa22.73■■□□□ 1.23
CPNE1-202ENST00000352393 SLC36A2Q495M3 483 aa22.73■■□□□ 1.23
CPNE1-202ENST00000352393 C2orf27AQ580R0 203 aa22.73■■□□□ 1.23
CPNE1-202ENST00000352393 MRPL2Q5T653 305 aaKnown RBP22.73■■□□□ 1.23
CPNE1-202ENST00000352393 SDE2Q6IQ49 451 aa22.73■■□□□ 1.23
CPNE1-202ENST00000352393 ZNF782Q6ZMW2 699 aaPredicted RBP22.73■■□□□ 1.23
CPNE1-202ENST00000352393 TMPRSS11FQ6ZWK6 438 aa22.73■■□□□ 1.23
CPNE1-202ENST00000352393 OR4K14Q8NGD5 310 aa22.73■■□□□ 1.23
CPNE1-202ENST00000352393 SMARCD2Q92925 531 aa22.73■■□□□ 1.23
CPNE1-202ENST00000352393 C4orf36Q96KX1 117 aa22.73■■□□□ 1.23
CPNE1-202ENST00000352393 CITED4Q96RK1 184 aa22.73■■□□□ 1.23
CPNE1-202ENST00000352393 CXXC1Q9P0U4 656 aaPredicted RBP22.73■■□□□ 1.23
CPNE1-202ENST00000352393 SIGLEC7Q9Y286 467 aa22.73■■□□□ 1.23
CPNE1-202ENST00000352393 A0A1W2PP55 124 aa22.73■■□□□ 1.23
CPNE1-202ENST00000352393 MRPL3P09001 348 aaKnown RBP22.73■■□□□ 1.23
CPNE1-202ENST00000352393 SBK2P0C263 348 aa22.73■■□□□ 1.23
CPNE1-202ENST00000352393 NID1P14543 1247 aa22.73■■□□□ 1.23
CPNE1-202ENST00000352393 NOS3P29474 1203 aa22.73■■□□□ 1.23
CPNE1-202ENST00000352393 WASP42768 502 aa22.73■■□□□ 1.23
CPNE1-202ENST00000352393 RPS7P62081 194 aaKnown RBP22.73■■□□□ 1.23
CPNE1-202ENST00000352393 ANGPT1Q15389 498 aa22.73■■□□□ 1.23
CPNE1-202ENST00000352393 SPRED2Q7Z698 418 aa22.73■■□□□ 1.23
CPNE1-202ENST00000352393 OR5H6Q8NGV6 325 aa22.73■■□□□ 1.23
CPNE1-202ENST00000352393 IFT27Q9BW83 186 aa22.73■■□□□ 1.23
CPNE1-202ENST00000352393 EMC7Q9NPA0 242 aa22.73■■□□□ 1.23
CPNE1-202ENST00000352393 NUDT15Q9NV35 164 aa22.73■■□□□ 1.23
CPNE1-202ENST00000352393 KCNE5Q9UJ90 142 aa22.73■■□□□ 1.23
CPNE1-202ENST00000352393 MOSPD1Q9UJG1 213 aa22.73■■□□□ 1.23
CPNE1-202ENST00000352393 MKI67P46013 3256 aaKnown RBP22.72■■□□□ 1.23
CPNE1-202ENST00000352393 BTN3A3O00478 584 aa22.72■■□□□ 1.23
CPNE1-202ENST00000352393 NDUFS1P28331 727 aa22.72■■□□□ 1.23
CPNE1-202ENST00000352393 FHL5Q5TD97 284 aa22.72■■□□□ 1.23
CPNE1-202ENST00000352393 OR4N5Q8IXE1 308 aa22.72■■□□□ 1.23
CPNE1-202ENST00000352393 C12orf76Q8N812 135 aaPredicted RBP22.72■■□□□ 1.23
CPNE1-202ENST00000352393 TEX19Q8NA77 164 aa22.72■■□□□ 1.23
CPNE1-202ENST00000352393 GPR137Q96N19 417 aa22.72■■□□□ 1.23
CPNE1-202ENST00000352393 DPAGT1Q9H3H5 408 aa22.72■■□□□ 1.23
CPNE1-202ENST00000352393 ZNF624Q9P2J8 865 aaPredicted RBP22.72■■□□□ 1.23
CPNE1-202ENST00000352393 TMEM5Q9Y2B1 443 aa22.72■■□□□ 1.23
CPNE1-202ENST00000352393 SLC35A3Q9Y2D2 325 aa22.72■■□□□ 1.23
CPNE1-202ENST00000352393 STON1Q9Y6Q2 735 aa22.72■■□□□ 1.23
CPNE1-202ENST00000352393 C2orf16Q68DN1 1984 aa22.72■■□□□ 1.23
CPNE1-202ENST00000352393 CDHR4A6H8M9 788 aa22.72■■□□□ 1.23
CPNE1-202ENST00000352393 FMO6PO60774 539 aa22.72■■□□□ 1.23
CPNE1-202ENST00000352393 FZD7O75084 574 aa22.72■■□□□ 1.23
CPNE1-202ENST00000352393 RFPL3O75679 317 aa22.72■■□□□ 1.23
CPNE1-202ENST00000352393 IGFALSP35858 605 aa22.72■■□□□ 1.23
CPNE1-202ENST00000352393 SRP9P49458 86 aaKnown RBP22.72■■□□□ 1.23
CPNE1-202ENST00000352393 SIM1P81133 766 aaPredicted RBP22.72■■□□□ 1.23
CPNE1-202ENST00000352393 DCST2Q5T1A1 773 aa22.72■■□□□ 1.23
CPNE1-202ENST00000352393 DMKNQ6E0U4 476 aaPredicted RBP22.72■■□□□ 1.23
CPNE1-202ENST00000352393 GET4Q7L5D6 327 aaPredicted RBP22.72■■□□□ 1.23
CPNE1-202ENST00000352393 LRRC17Q8N6Y2 441 aa22.72■■□□□ 1.23
CPNE1-202ENST00000352393 OR11H7Q8NGC8 314 aa22.72■■□□□ 1.23
CPNE1-202ENST00000352393 PHF21AQ96BD5 680 aa22.72■■□□□ 1.23
CPNE1-202ENST00000352393 BPIFA2Q96DR5 249 aa22.72■■□□□ 1.23
CPNE1-202ENST00000352393 OR51V1Q9H2C8 321 aa22.72■■□□□ 1.23
CPNE1-202ENST00000352393 ERVMER34-1Q9H9K5 563 aa22.72■■□□□ 1.23
CPNE1-202ENST00000352393 ZFP64Q9NPA5 681 aa22.72■■□□□ 1.23
CPNE1-202ENST00000352393 DIABLOQ9NR28 239 aa22.72■■□□□ 1.23
CPNE1-202ENST00000352393 SLCO1C1Q9NYB5 712 aa22.72■■□□□ 1.23
CPNE1-202ENST00000352393 KLF15Q9UIH9 416 aa22.72■■□□□ 1.23
CPNE1-202ENST00000352393 NUBP2Q9Y5Y2 271 aa22.72■■□□□ 1.23
CPNE1-202ENST00000352393 TRAV6A0A075B6T7 132 aa22.71■■□□□ 1.23
CPNE1-202ENST00000352393 SCAMP1O15126 338 aa22.71■■□□□ 1.23
CPNE1-202ENST00000352393 STOMP27105 288 aa22.71■■□□□ 1.23
CPNE1-202ENST00000352393 KRT74Q7RTS7 529 aa22.71■■□□□ 1.23
CPNE1-202ENST00000352393 AMIGO1Q86WK6 493 aa22.71■■□□□ 1.23
CPNE1-202ENST00000352393 OR6C2Q9NZP2 312 aa22.71■■□□□ 1.23
CPNE1-202ENST00000352393 C19orf53Q9UNZ5 99 aaPredicted RBP22.71■■□□□ 1.23
CPNE1-202ENST00000352393 STX11O75558 287 aa22.7■■□□□ 1.23
CPNE1-202ENST00000352393 KAT7O95251 611 aa22.7■■□□□ 1.23
CPNE1-202ENST00000352393 ADH1BP00325 375 aa22.7■■□□□ 1.23
CPNE1-202ENST00000352393 CPMP14384 443 aa22.7■■□□□ 1.23
CPNE1-202ENST00000352393 C5AR1P21730 350 aa22.7■■□□□ 1.23
CPNE1-202ENST00000352393 OR12D2P58182 307 aa22.7■■□□□ 1.23
CPNE1-202ENST00000352393 TRMT12Q53H54 448 aaKnown RBP22.7■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms