RNA–Protein interactions for RNA: ENST00000351808.9

IFT88-202, Transcript of intraflagellar transport 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene IFT88, Length 2,856 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-202ENST00000351808 AKIRIN2Q53H80 203 aa12.35□□□□□ -0.43
IFT88-202ENST00000351808 ZNF805Q5CZA5 627 aa12.35□□□□□ -0.43
IFT88-202ENST00000351808 RAB12Q6IQ22 244 aa12.35□□□□□ -0.43
IFT88-202ENST00000351808 ZNF546Q86UE3 836 aa12.35□□□□□ -0.43
IFT88-202ENST00000351808 RAB7BQ96AH8 199 aa12.35□□□□□ -0.43
IFT88-202ENST00000351808 MYEOVQ96EZ4 313 aa12.35□□□□□ -0.43
IFT88-202ENST00000351808 C14orf144Q96I85 54 aa12.35□□□□□ -0.43
IFT88-202ENST00000351808 MEGF10Q96KG7 1140 aa12.35□□□□□ -0.43
IFT88-202ENST00000351808 RSRP1Q9BUV0 290 aa12.35□□□□□ -0.43
IFT88-202ENST00000351808 METTL1Q9UBP6 276 aaKnown RBP12.35□□□□□ -0.43
IFT88-202ENST00000351808 MOKQ9UQ07 419 aa12.35□□□□□ -0.43
IFT88-202ENST00000351808 A0A1B0GWJ7 208 aa12.35□□□□□ -0.43
IFT88-202ENST00000351808 BCHEP06276 602 aa12.35□□□□□ -0.43
IFT88-202ENST00000351808 NQO2P16083 231 aa12.35□□□□□ -0.43
IFT88-202ENST00000351808 ABOP16442 354 aa12.35□□□□□ -0.43
IFT88-202ENST00000351808 CD22P20273 847 aa12.35□□□□□ -0.43
IFT88-202ENST00000351808 PNLIPRP2P54317 469 aa12.35□□□□□ -0.43
IFT88-202ENST00000351808 REEP3Q6NUK4 255 aa12.35□□□□□ -0.43
IFT88-202ENST00000351808 C11orf88Q6PI97 169 aa12.35□□□□□ -0.43
IFT88-202ENST00000351808 OR5D16Q8NGK9 328 aa12.35□□□□□ -0.43
IFT88-202ENST00000351808 SKA2Q8WVK7 121 aaPredicted RBP12.35□□□□□ -0.43
IFT88-202ENST00000351808 LRIG1Q96JA1 1093 aa12.35□□□□□ -0.43
IFT88-202ENST00000351808 GGACTQ9BVM4 153 aa12.35□□□□□ -0.43
IFT88-202ENST00000351808 ZNF471Q9BX82 626 aaPredicted RBP12.35□□□□□ -0.43
IFT88-202ENST00000351808 TXNRD2Q9NNW7 524 aa12.35□□□□□ -0.43
IFT88-202ENST00000351808 PPP2R3BQ9Y5P8 575 aa12.35□□□□□ -0.43
IFT88-202ENST00000351808 PLXNA4Q9HCM2 1894 aa12.35□□□□□ -0.43
IFT88-202ENST00000351808 TRPM7Q96QT4 1865 aa12.34□□□□□ -0.43
IFT88-202ENST00000351808 INSIG1O15503 277 aa12.34□□□□□ -0.43
IFT88-202ENST00000351808 HYAL3O43820 417 aaPredicted RBP12.34□□□□□ -0.43
IFT88-202ENST00000351808 ITGA10O75578 1167 aa12.34□□□□□ -0.43
IFT88-202ENST00000351808 FOLR2P14207 255 aa12.34□□□□□ -0.43
IFT88-202ENST00000351808 HTR2AP28223 471 aa12.34□□□□□ -0.43
IFT88-202ENST00000351808 POU3F4P49335 361 aa12.34□□□□□ -0.43
IFT88-202ENST00000351808 HCCSP53701 268 aa12.34□□□□□ -0.43
IFT88-202ENST00000351808 C21orf58P58505 322 aa12.34□□□□□ -0.43
IFT88-202ENST00000351808 KRT33BQ14525 404 aa12.34□□□□□ -0.43
IFT88-202ENST00000351808 C10orf91Q5T1B1 145 aa12.34□□□□□ -0.43
IFT88-202ENST00000351808 LRRC70Q7Z2Q7 622 aa12.34□□□□□ -0.43
IFT88-202ENST00000351808 OR2AK2Q8NG84 335 aa12.34□□□□□ -0.43
IFT88-202ENST00000351808 OR51G2Q8NGK0 314 aa12.34□□□□□ -0.43
IFT88-202ENST00000351808 AKR7LQ8NHP1 331 aa12.34□□□□□ -0.43
IFT88-202ENST00000351808 GOT1L1Q8NHS2 421 aaPredicted RBP12.34□□□□□ -0.43
IFT88-202ENST00000351808 ACOT11Q8WXI4 607 aaPredicted RBP12.34□□□□□ -0.43
IFT88-202ENST00000351808 EID2BQ96D98 161 aa12.34□□□□□ -0.43
IFT88-202ENST00000351808 MGME1Q9BQP7 344 aa12.34□□□□□ -0.43
IFT88-202ENST00000351808 TRIM62Q9BVG3 475 aa12.34□□□□□ -0.43
IFT88-202ENST00000351808 REEP4Q9H6H4 257 aa12.34□□□□□ -0.43
IFT88-202ENST00000351808 TREM1Q9NP99 234 aa12.34□□□□□ -0.43
IFT88-202ENST00000351808 DZANK1Q9NVP4 752 aa12.34□□□□□ -0.43
IFT88-202ENST00000351808 PHYHO14832 338 aa12.34□□□□□ -0.43
IFT88-202ENST00000351808 SC5DO75845 299 aa12.34□□□□□ -0.43
IFT88-202ENST00000351808 DCTDP32321 178 aa12.34□□□□□ -0.43
IFT88-202ENST00000351808 SPAM1P38567 509 aa12.34□□□□□ -0.43
IFT88-202ENST00000351808 ADH7P40394 386 aa12.34□□□□□ -0.43
IFT88-202ENST00000351808 ASMTP46597 345 aa12.34□□□□□ -0.43
IFT88-202ENST00000351808 TBX4P57082 545 aa12.34□□□□□ -0.43
IFT88-202ENST00000351808 IRF8Q02556 426 aa12.34□□□□□ -0.43
IFT88-202ENST00000351808 SKP2Q13309 424 aa12.34□□□□□ -0.43
IFT88-202ENST00000351808 SSX2Q16385 188 aa12.34□□□□□ -0.43
IFT88-202ENST00000351808 FAM76BQ5HYJ3 339 aa12.34□□□□□ -0.43
IFT88-202ENST00000351808 KIAA1211LQ6NV74 962 aa12.34□□□□□ -0.43
IFT88-202ENST00000351808 TAPT1Q6NXT6 567 aa12.34□□□□□ -0.43
IFT88-202ENST00000351808 C3orf33Q6P1S2 294 aa12.34□□□□□ -0.43
IFT88-202ENST00000351808 SLC29A4Q7RTT9 530 aa12.34□□□□□ -0.43
IFT88-202ENST00000351808 NUDT13Q86X67 352 aa12.34□□□□□ -0.43
IFT88-202ENST00000351808 CMTM4Q8IZR5 234 aa12.34□□□□□ -0.43
IFT88-202ENST00000351808 SIRT6Q8N6T7 355 aa12.34□□□□□ -0.43
IFT88-202ENST00000351808 ABHD4Q8TB40 342 aa12.34□□□□□ -0.43
IFT88-202ENST00000351808 CA5BP1Q8WTZ4 195 aa12.34□□□□□ -0.43
IFT88-202ENST00000351808 TCTEX1D2Q8WW35 142 aa12.34□□□□□ -0.43
IFT88-202ENST00000351808 NAA11Q9BSU3 229 aaPredicted RBP12.34□□□□□ -0.43
IFT88-202ENST00000351808 SPON2Q9BUD6 331 aa12.34□□□□□ -0.43
IFT88-202ENST00000351808 RNF122Q9H9V4 155 aa12.34□□□□□ -0.43
IFT88-202ENST00000351808 CHMP1AQ9HD42 196 aaPredicted RBP12.34□□□□□ -0.43
IFT88-202ENST00000351808 NAP1L6A6NFF2 107 aa12.33□□□□□ -0.44
IFT88-202ENST00000351808 PTGESO14684 152 aa12.33□□□□□ -0.44
IFT88-202ENST00000351808 CTDSPLO15194 276 aa12.33□□□□□ -0.44
IFT88-202ENST00000351808 OIP5O43482 229 aa12.33□□□□□ -0.44
IFT88-202ENST00000351808 OR8U8P0C7N1 319 aa12.33□□□□□ -0.44
IFT88-202ENST00000351808 STAT5AP42229 794 aa12.33□□□□□ -0.44
IFT88-202ENST00000351808 PTSQ03393 145 aa12.33□□□□□ -0.44
IFT88-202ENST00000351808 SREBF2Q12772 1141 aa12.33□□□□□ -0.44
IFT88-202ENST00000351808 TEX30Q5JUR7 227 aa12.33□□□□□ -0.44
IFT88-202ENST00000351808 CDC73Q6P1J9 531 aa12.33□□□□□ -0.44
IFT88-202ENST00000351808 TNFAIP8L2Q6P589 184 aaPredicted RBP12.33□□□□□ -0.44
IFT88-202ENST00000351808 TSSK4Q6SA08 328 aa12.33□□□□□ -0.44
IFT88-202ENST00000351808 LRRTM4Q86VH4 590 aa12.33□□□□□ -0.44
IFT88-202ENST00000351808 OR13C5Q8NGS8 318 aa12.33□□□□□ -0.44
IFT88-202ENST00000351808 ZNF671Q8TAW3 534 aa12.33□□□□□ -0.44
IFT88-202ENST00000351808 C14orf79Q96F83 325 aa12.33□□□□□ -0.44
IFT88-202ENST00000351808 CPNE2Q96FN4 548 aaPredicted RBP12.33□□□□□ -0.44
IFT88-202ENST00000351808 JAM3Q9BX67 310 aa12.33□□□□□ -0.44
IFT88-202ENST00000351808 PDFQ9HBH1 243 aa12.33□□□□□ -0.44
IFT88-202ENST00000351808 TMEM138Q9NPI0 162 aa12.33□□□□□ -0.44
IFT88-202ENST00000351808 A4GNTQ9UNA3 340 aa12.33□□□□□ -0.44
IFT88-202ENST00000351808 OR14I1A6ND48 311 aa12.33□□□□□ -0.44
IFT88-202ENST00000351808 H3BRB1 525 aa12.33□□□□□ -0.44
IFT88-202ENST00000351808 H7C0S8 307 aa12.33□□□□□ -0.44
IFT88-202ENST00000351808 M0R3H8 397 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms