RNA–Protein interactions for RNA: ENST00000348987.4

SCARF1-202, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best) BASIC

Gene SCARF1, Length 2,619 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-202ENST00000348987 ORAI3Q9BRQ5 295 aa17.36■□□□□ 0.37
SCARF1-202ENST00000348987 OR51I1Q9H343 314 aa17.36■□□□□ 0.37
SCARF1-202ENST00000348987 LRRN3Q9H3W5 708 aa17.36■□□□□ 0.37
SCARF1-202ENST00000348987 PRR23D1E9PI22 279 aaPredicted RBP17.36■□□□□ 0.37
SCARF1-202ENST00000348987 PGRMC2O15173 223 aa17.36■□□□□ 0.37
SCARF1-202ENST00000348987 SURF4O15260 269 aa17.36■□□□□ 0.37
SCARF1-202ENST00000348987 SUSD5O60279 629 aa17.36■□□□□ 0.37
SCARF1-202ENST00000348987 SIX6O95475 246 aa17.36■□□□□ 0.37
SCARF1-202ENST00000348987 TGM6O95932 706 aa17.36■□□□□ 0.37
SCARF1-202ENST00000348987 LINC00271P0C7V0 271 aa17.36■□□□□ 0.37
SCARF1-202ENST00000348987 PRR23D2P0DMB1 279 aaPredicted RBP17.36■□□□□ 0.37
SCARF1-202ENST00000348987 DHODHQ02127 395 aa17.36■□□□□ 0.37
SCARF1-202ENST00000348987 GNA13Q14344 377 aa17.36■□□□□ 0.37
SCARF1-202ENST00000348987 SYT9Q86SS6 491 aa17.36■□□□□ 0.37
SCARF1-202ENST00000348987 OR1S1Q8NH92 325 aa17.36■□□□□ 0.37
SCARF1-202ENST00000348987 SGPP1Q9BX95 441 aa17.36■□□□□ 0.37
SCARF1-202ENST00000348987 TEX10Q9NXF1 929 aaPredicted RBP17.36■□□□□ 0.37
SCARF1-202ENST00000348987 PRKAG2Q9UGJ0 569 aa17.36■□□□□ 0.37
SCARF1-202ENST00000348987 ICKQ9UPZ9 632 aa17.36■□□□□ 0.37
SCARF1-202ENST00000348987 TSPAN11A1L157 253 aa17.35■□□□□ 0.37
SCARF1-202ENST00000348987 ZC3H12DA2A288 527 aaKnown RBP17.35■□□□□ 0.37
SCARF1-202ENST00000348987 B3GALNT1O75752 331 aa17.35■□□□□ 0.37
SCARF1-202ENST00000348987 GDNFP39905 211 aa17.35■□□□□ 0.37
SCARF1-202ENST00000348987 RAD52P43351 418 aa17.35■□□□□ 0.37
SCARF1-202ENST00000348987 SLC3A1Q07837 685 aa17.35■□□□□ 0.37
SCARF1-202ENST00000348987 CNTN1Q12860 1018 aa17.35■□□□□ 0.37
SCARF1-202ENST00000348987 SLC25A25Q6KCM7 469 aa17.35■□□□□ 0.37
SCARF1-202ENST00000348987 LINC00471Q8N535 108 aa17.35■□□□□ 0.37
SCARF1-202ENST00000348987 GCDHQ92947 438 aaPredicted RBP17.35■□□□□ 0.37
SCARF1-202ENST00000348987 MRPS24Q96EL2 167 aaKnown RBP17.35■□□□□ 0.37
SCARF1-202ENST00000348987 EVA1AQ9H8M9 152 aa17.35■□□□□ 0.37
SCARF1-202ENST00000348987 CA5BQ9Y2D0 317 aa17.35■□□□□ 0.37
SCARF1-202ENST00000348987 DYRK1BQ9Y463 629 aa17.35■□□□□ 0.37
SCARF1-202ENST00000348987 PCDHGA9Q9Y5G4 932 aaKnown RBP17.35■□□□□ 0.37
SCARF1-202ENST00000348987 E9PI62 339 aa17.35■□□□□ 0.37
SCARF1-202ENST00000348987 FOXE1O00358 373 aaPredicted RBP17.35■□□□□ 0.37
SCARF1-202ENST00000348987 ARPC5O15511 151 aa17.35■□□□□ 0.37
SCARF1-202ENST00000348987 TBX6O95947 436 aaPredicted RBP17.35■□□□□ 0.37
SCARF1-202ENST00000348987 BUD31P41223 144 aaPredicted RBP17.35■□□□□ 0.37
SCARF1-202ENST00000348987 PITPNAQ00169 270 aa17.35■□□□□ 0.37
SCARF1-202ENST00000348987 DEFA5Q01523 94 aa17.35■□□□□ 0.37
SCARF1-202ENST00000348987 TCEAL5Q5H9L2 206 aa17.35■□□□□ 0.37
SCARF1-202ENST00000348987 HSD17B13Q7Z5P4 300 aaPredicted RBP17.35■□□□□ 0.37
SCARF1-202ENST00000348987 OR9A1PQ8NGU1 263 aa17.35■□□□□ 0.37
SCARF1-202ENST00000348987 OR5W2Q8NH69 310 aa17.35■□□□□ 0.37
SCARF1-202ENST00000348987 SLC5A11Q8WWX8 675 aa17.35■□□□□ 0.37
SCARF1-202ENST00000348987 LRRC3BQ96PB8 259 aa17.35■□□□□ 0.37
SCARF1-202ENST00000348987 TIMP4Q99727 224 aa17.35■□□□□ 0.37
SCARF1-202ENST00000348987 NFKBIL1Q9UBC1 381 aaPredicted RBP17.35■□□□□ 0.37
SCARF1-202ENST00000348987 PLXND1Q9Y4D7 1925 aa17.35■□□□□ 0.37
SCARF1-202ENST00000348987 A0A1W2PPK0 400 aa17.34■□□□□ 0.37
SCARF1-202ENST00000348987 ARPC1BO15143 372 aaKnown RBP17.34■□□□□ 0.37
SCARF1-202ENST00000348987 RP2O75695 350 aa17.34■□□□□ 0.37
SCARF1-202ENST00000348987 HTR1FP30939 366 aa17.34■□□□□ 0.37
SCARF1-202ENST00000348987 S100A11P31949 105 aa17.34■□□□□ 0.37
SCARF1-202ENST00000348987 CCR8P51685 355 aa17.34■□□□□ 0.37
SCARF1-202ENST00000348987 GPR85P60893 370 aa17.34■□□□□ 0.37
SCARF1-202ENST00000348987 NXPE4Q6UWF7 544 aa17.34■□□□□ 0.37
SCARF1-202ENST00000348987 FAM83HQ6ZRV2 1179 aaPredicted RBP17.34■□□□□ 0.37
SCARF1-202ENST00000348987 PAQR7Q86WK9 346 aa17.34■□□□□ 0.37
SCARF1-202ENST00000348987 C12orf40Q86WS4 652 aa17.34■□□□□ 0.37
SCARF1-202ENST00000348987 KRT78Q8N1N4 520 aa17.34■□□□□ 0.37
SCARF1-202ENST00000348987 GNPDA2Q8TDQ7 276 aa17.34■□□□□ 0.37
SCARF1-202ENST00000348987 PRRC1Q96M27 445 aa17.34■□□□□ 0.37
SCARF1-202ENST00000348987 SLC38A3Q99624 504 aa17.34■□□□□ 0.37
SCARF1-202ENST00000348987 C7orf50Q9BRJ6 194 aaKnown RBP17.34■□□□□ 0.37
SCARF1-202ENST00000348987 EFCAB11Q9BUY7 163 aa17.34■□□□□ 0.37
SCARF1-202ENST00000348987 ALG8Q9BVK2 526 aa17.34■□□□□ 0.37
SCARF1-202ENST00000348987 H2AFY2Q9P0M6 372 aaPredicted RBP17.34■□□□□ 0.37
SCARF1-202ENST00000348987 NTMQ9P121 344 aa17.34■□□□□ 0.37
SCARF1-202ENST00000348987 ZNF69Q9UC07 566 aa17.34■□□□□ 0.37
SCARF1-202ENST00000348987 MAFFQ9ULX9 164 aa17.34■□□□□ 0.37
SCARF1-202ENST00000348987 RCE1Q9Y256 329 aa17.34■□□□□ 0.37
SCARF1-202ENST00000348987 ANTXRLA6NF34 631 aa17.34■□□□□ 0.37
SCARF1-202ENST00000348987 CACNB4O00305 520 aaPredicted RBP17.34■□□□□ 0.37
SCARF1-202ENST00000348987 NR2F1P10589 423 aa17.34■□□□□ 0.37
SCARF1-202ENST00000348987 PSMA6P60900 246 aaKnown RBP17.34■□□□□ 0.37
SCARF1-202ENST00000348987 CAMK1Q14012 370 aa17.34■□□□□ 0.37
SCARF1-202ENST00000348987 MELKQ14680 651 aa17.34■□□□□ 0.37
SCARF1-202ENST00000348987 METTL11BQ5VVY1 283 aa17.34■□□□□ 0.37
SCARF1-202ENST00000348987 NHLRC1Q6VVB1 395 aa17.34■□□□□ 0.37
SCARF1-202ENST00000348987 CPOQ8IVL8 374 aa17.34■□□□□ 0.37
SCARF1-202ENST00000348987 HAVCR2Q8TDQ0 301 aa17.34■□□□□ 0.37
SCARF1-202ENST00000348987 DTD2Q96FN9 168 aa17.34■□□□□ 0.37
SCARF1-202ENST00000348987 LRRC46Q96FV0 321 aa17.34■□□□□ 0.37
SCARF1-202ENST00000348987 OR6C65A6NJZ3 312 aa17.34■□□□□ 0.37
SCARF1-202ENST00000348987 GALR3O60755 368 aaPredicted RBP17.34■□□□□ 0.37
SCARF1-202ENST00000348987 SDC3O75056 442 aa17.34■□□□□ 0.37
SCARF1-202ENST00000348987 ADH1AP07327 375 aa17.34■□□□□ 0.37
SCARF1-202ENST00000348987 RHOP08100 348 aa17.34■□□□□ 0.37
SCARF1-202ENST00000348987 PSMB1P20618 241 aaKnown RBP17.34■□□□□ 0.37
SCARF1-202ENST00000348987 MAOBP27338 520 aa17.34■□□□□ 0.37
SCARF1-202ENST00000348987 TSPAN31Q12999 210 aa17.34■□□□□ 0.37
SCARF1-202ENST00000348987 DYRK1AQ13627 763 aa17.34■□□□□ 0.37
SCARF1-202ENST00000348987 CDC73Q6P1J9 531 aa17.34■□□□□ 0.37
SCARF1-202ENST00000348987 PDZD9Q8IXQ8 264 aa17.34■□□□□ 0.37
SCARF1-202ENST00000348987 WDR34Q96EX3 536 aa17.34■□□□□ 0.37
SCARF1-202ENST00000348987 CARNS1A5YM72 827 aa17.33■□□□□ 0.36
SCARF1-202ENST00000348987 D6RAR5 112 aa17.33■□□□□ 0.36
SCARF1-202ENST00000348987 ABCD4O14678 606 aa17.33■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms